Overview Annotation GWAS Evidence Associated genes

P29005

Metabolite ID
P29005
Deionized mass
562.1670 Da
Average m/z
563.1760
Average RT
15.6615
Adduct
[M+H]+
Association scope
Overlapping genes only
Associated genes
10
GWAS result file
Available

Candidate annotations

Search compound candidates by deionized mass and tolerance. Follow compound IDs for database records, or use name searches to explore chemistry and soybean literature. About candidate annotations

GWAS Evidence

Dataset: indexed GWAS records.

Settings

SNP counts, plot highlights, gene associations and downloads use P < 10⁻¹⁰. Changing the threshold updates this page together.

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This Q–Q plot describes the indexed records. For downsampled files, it does not represent the distribution across all tested variants. Data coverage

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Associated genes

10 genes linked to SNP records with P < 10⁻¹⁰ in the selected scope. Supporting SNP records are counted per feature–gene pair.

Gene ID Alias Description Arabidopsis ortholog Supporting SNP recordsGene interval (1-based)Minimum P
Glyma.03G209700 hypothetical protein NA 1Chr03:41646792–41648527 (+)1.499e-13
Glyma.03G223000 hypothetical protein AT1G02500:SAM1:S-adenosylmethionine synthetase 1 1Chr03:42579900–42582675 (+)9.445e-15
Glyma.03G223300 hypothetical protein AT3G62190:AT3G62190:Chaperone DnaJ-domain superfamily protein 1Chr03:42601145–42604438 (-)7.073e-13
Glyma.08G204800 hypothetical protein AT3G16140:PSAH-1:photosystem I subunit H-1 1Chr08:16601039–16602646 (+)8.419e-13
Glyma.08G210200 hypothetical protein NA 1Chr08:17010526–17012557 (+)3.64e-11
Glyma.08G210300 hypothetical protein NA 1Chr08:17011623–17012548 (-)3.64e-11
Glyma.09G080200 hypothetical protein NA 1Chr09:9256042–9263239 (-)1.009e-11
Glyma.09G270500 hypothetical protein AT1G09780:iPGAM1:Phosphoglycerate mutase, 2,3-bisphosphoglycerate-independent 1Chr09:48745649–48751140 (+)8.666e-11
Glyma.11G064300 hypothetical protein AT4G36780:BEH2:BES1/BZR1 homolog 2 1Chr11:4849799–4851673 (+)5.287e-11
Glyma.13G203900 hypothetical protein NA 1Chr13:31793697–31796601 (-)2.479e-11