Soybean mGWAS DBExplore The Genetic Basis Of Soybean Metabolism Glycine max
Overview Annotation GWAS Evidence Associated genes

P28321

Metabolite ID
P28321
Deionized mass
126.0303 Da
Average m/z
127.0379
Average RT
15.4695
Adduct
[M+H]+
Association scope
Overlapping genes only
Associated genes
90
GWAS result file
Available
Open in Soybean Metabolome Repository

Candidate annotations

Search compound candidates by deionized mass and tolerance. Follow compound IDs for database records, or use name searches to explore chemistry and soybean literature. About candidate annotations

GWAS Evidence

Dataset: indexed GWAS records.

Settings

SNP counts, plot highlights, gene associations and downloads use P < 10⁻¹⁰. Changing the threshold updates this page together.

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Associated genes

90 genes linked to SNP records with P < 10⁻¹⁰ in the selected scope. Supporting SNP records are counted per feature–gene pair.

Gene ID Alias Description Arabidopsis ortholog Supporting SNP recordsGene interval (1-based)Minimum P
Glyma.17G217300 hypothetical protein AT2G25170:PKL:chromatin remodeling factor CHD3 (PICKLE) 6Chr17:36638143–36669455 (-)6.711e-11
Glyma.20G105300 hypothetical protein AT4G38470:STY46:ACT-like protein tyrosine kinase family protein 6Chr20:34757381–34771672 (+)1.574e-11
Glyma.06G201700 hypothetical protein NA 3Chr06:18577883–18617874 (+)7.678e-13
Glyma.17G217900 hypothetical protein NA 3Chr17:36771760–36778616 (-)8.656e-12
Glyma.01G126800 hypothetical protein NA 2Chr01:43602195–43612710 (+)3.033e-12
Glyma.05G164700 hypothetical protein NA 2Chr05:35543931–35549196 (-)7.721e-13
Glyma.12G054700 hypothetical protein AT3G45140:LOX2:lipoxygenase 2 2Chr12:3949453–3957386 (-)1.546e-12
Glyma.14G149300 hypothetical protein NA 2Chr14:32235308–32258014 (+)7.048e-11
Glyma.16G111500 hypothetical protein AT4G35500:AT4G35500:Protein kinase superfamily protein 2Chr16:24626024–24635513 (+)3.259e-11
Glyma.16G203300 hypothetical protein AT5G62230:ERL1:ERECTA-like 1 2Chr16:36437330–36445131 (+)5.006e-11
Glyma.16G208500 EIF6 AT3G55620:eIF6A:Translation initiation factor IF6 2Chr16:36806718–36809299 (+)5.896e-15
Glyma.16G209300 hypothetical protein NA 2Chr16:36856833–36863994 (-)6.856e-11
Glyma.17G216700 hypothetical protein AT4G31930:AT4G31930:Mitochondrial glycoprotein family protein 2Chr17:36510062–36519347 (+)1.042e-11
Glyma.17G217200 hypothetical protein AT4G31910:BAT1:HXXXD-type acyl-transferase family protein 2Chr17:36624152–36630712 (-)6.711e-11
Glyma.17G217600 hypothetical protein NA 2Chr17:36695797–36698982 (-)6.711e-11
Glyma.18G230700 hypothetical protein AT3G61290:AT3G61290:O-glucosyltransferase rumi-like protein (DUF821) 2Chr18:51943730–51947645 (+)6.607e-13
Glyma.01G124800 hypothetical protein AT2G38320:TBL34:TRICHOME BIREFRINGENCE-LIKE 34 1Chr01:43072403–43076304 (+)6.077e-13
Glyma.01G125400 hypothetical protein NA 1Chr01:43394231–43404097 (-)6.077e-13
Glyma.01G125500 hypothetical protein NA 1Chr01:43398981–43401979 (+)6.077e-13
Glyma.01G126000 hypothetical protein AT5G01650:AT5G01650:Tautomerase/MIF superfamily protein 1Chr01:43477322–43480661 (-)6.077e-13
Glyma.01G126300 hypothetical protein NA 1Chr01:43513210–43516682 (-)6.077e-13
Glyma.01G126400 hypothetical protein NA 1Chr01:43526917–43529405 (-)6.077e-13
Glyma.01G126500 hypothetical protein NA 1Chr01:43543307–43549330 (-)6.077e-13
Glyma.01G126900 hypothetical protein NA 1Chr01:43632082–43635399 (+)3.033e-12
Glyma.01G127400 hypothetical protein AT1G58170:AT1G58170:Disease resistance-responsive (dirigent-like protein) family protein__AT1G55210:AT1G55210:Disease r… 1Chr01:43890586–43892006 (+)2.425e-11
Glyma.03G023000 hypothetical protein AT4G00220:JLO:Lateral organ boundaries (LOB) domain family protein 1Chr03:2423540–2428634 (-)1.297e-16
Glyma.04G084200 hypothetical protein AT2G25830:AT2G25830:YebC-like protein 1Chr04:7137351–7146570 (-)7.159e-11
Glyma.04G112200 hypothetical protein AT5G51750:SBT1.3:subtilase 1.3 1Chr04:12562882–12565006 (+)2.796e-13
Glyma.05G127200 hypothetical protein AT1G29790:AT1G29790:S-adenosyl-L-methionine-dependent methyltransferases superfamily protein 1Chr05:32014213–32017922 (-)3.84e-12
Glyma.05G127300 hypothetical protein AT1G64520:RPN12a:regulatory particle non-ATPase 12A__AT5G42040:RPN12b:regulatory particle non-ATPase 12B 1Chr05:32021521–32025767 (-)4.784e-12
Glyma.05G127400 hypothetical protein AT1G29850:AT1G29850:double-stranded DNA-binding family protein 1Chr05:32030115–32033716 (+)4.784e-12
Glyma.05G127500 hypothetical protein NA 1Chr05:32041345–32049554 (+)5.04e-12
Glyma.05G127800 hypothetical protein AT4G18240:SS4:starch synthase 4 1Chr05:32125404–32138244 (+)2.592e-11
Glyma.05G127900 SAD1 AT5G48870:SAD1:Small nuclear ribonucleoprotein family protein 1Chr05:32139620–32141770 (-)2.592e-11
Glyma.05G128200 hypothetical protein AT5G46330:FLS2:Leucine-rich receptor-like protein kinase family protein 1Chr05:32158034–32162343 (-)2.592e-11
Glyma.05G236400 hypothetical protein AT1G23210:GH9B6:glycosyl hydrolase 9B6__AT1G70710:GH9B1:glycosyl hydrolase 9B1 1Chr05:41274513–41279615 (-)5.078e-11
Glyma.05G236700 hypothetical protein AT4G33760:AT4G33760:tRNA synthetase class II (D, K and N) family protein 1Chr05:41301540–41310727 (+)1.286e-12
Glyma.05G237800 hypothetical protein AT1G48790:AMSH1:associated molecule with the SH3 domain of STAM 1 1Chr05:41406807–41413022 (-)3.409e-17
Glyma.06G125200 hypothetical protein AT4G27940:MTM1:manganese tracking factor for mitochondrial SOD2 1Chr06:10209787–10215982 (+)7.018e-11
Glyma.06G125300 hypothetical protein AT5G24105:AGP41:arabinogalactan protein 41 1Chr06:10216506–10218901 (-)7.018e-11
Glyma.06G200200 hypothetical protein NA 1Chr06:18327920–18331068 (-)7.257e-12
Glyma.06G261900 hypothetical protein NA 1Chr06:44875369–44879702 (-)3.547e-11
Glyma.06G301000 hypothetical protein NA 1Chr06:49001317–49005605 (+)8.412e-12
Glyma.07G021800 hypothetical protein AT1G80920:J8:Chaperone DnaJ-domain superfamily protein 1Chr07:1697119–1698666 (+)1.284e-11
Glyma.07G100400 hypothetical protein AT3G18050:AT3G18050:GPI-anchored protein 1Chr07:9523110–9526319 (+)1.267e-11
Glyma.08G016700 hypothetical protein AT1G63840:AT1G63840:RING/U-box superfamily protein 1Chr08:1330226–1331366 (-)7.552e-12
Glyma.09G057300 hypothetical protein AT5G57330:AT5G57330:Galactose mutarotase-like superfamily protein 1Chr09:5164998–5171598 (-)1.039e-11
Glyma.09G057400 hypothetical protein AT5G57320:VLN5:actin filament bundling protein P-115-ABP protein 1Chr09:5173554–5193820 (-)5.001e-12
Glyma.09G062900 hypothetical protein NA 1Chr09:6004419–6011041 (+)6.065e-13
Glyma.10G261100 hypothetical protein NA 1Chr10:48628245–48635184 (+)1.435e-11
Glyma.12G049300 hypothetical protein NA 1Chr12:3538428–3539170 (-)1.503e-11
Glyma.12G108600 hypothetical protein NA 1Chr12:9994609–9997302 (-)7.599e-14
Glyma.12G109500 hypothetical protein AT4G03415:PP2C52:Protein phosphatase 2C family protein 1Chr12:10308026–10314332 (-)7.599e-14
Glyma.13G161900 PAP25 purple acid phosphatase AT5G34850:PAP26:purple acid phosphatase 26 1Chr13:27748190–27752685 (-)5.529e-12
Glyma.14G069500 hypothetical protein AT5G37810:NIP4;1:NOD26-like intrinsic protein 4;1 1Chr14:5822246–5825628 (-)2.523e-11
Glyma.14G093100 hypothetical protein NA 1Chr14:8654730–8655892 (-)1.826e-11
Glyma.14G148800 hypothetical protein AT1G44760:AT1G44760:Adenine nucleotide alpha hydrolases-like superfamily protein 1Chr14:32154755–32157298 (+)7.048e-11
Glyma.16G057600 hypothetical protein AT3G27170:CLC-B:chloride channel B 1Chr16:5650591–5655830 (+)6.405e-15
Glyma.16G058100 hypothetical protein AT5G14180:MPL1:Myzus persicae-induced lipase 1 1Chr16:5685464–5692098 (+)5.616e-13
Glyma.16G111100 hypothetical protein NA 1Chr16:24438458–24444801 (+)3.259e-11
Glyma.16G137600 hypothetical protein NA 1Chr16:29468438–29472890 (-)4.042e-11
Glyma.16G139000 hypothetical protein NA 1Chr16:29623540–29631451 (+)5.147e-14
Glyma.16G139100 hypothetical protein NA 1Chr16:29632332–29634248 (-)5.781e-12
Glyma.16G139500 hypothetical protein AT5G66550:AT5G66550:Maf-like protein 1Chr16:29686243–29690410 (-)1.5e-17
Glyma.16G140000 hypothetical protein AT5G01820:SR1:serine/threonine protein kinase 1 1Chr16:29738375–29739010 (+)3.802e-14
Glyma.16G143400 hypothetical protein NA 1Chr16:30337469–30338390 (-)7.953e-11
Glyma.16G196800 hypothetical protein AT5G07250:RBL3:RHOMBOID-like protein 3 1Chr16:35831912–35835153 (+)1.279e-11
Glyma.16G207900 hypothetical protein AT5G08450:AT5G08450:zinc finger CCCH domain protein 1Chr16:36754888–36763450 (+)4.653e-11
Glyma.16G210300 hypothetical protein AT1G73340:AT1G73340:Cytochrome P450 superfamily protein 1Chr16:36943073–36948828 (+)8.175e-11
Glyma.16G210400 hypothetical protein AT1G73350:AT1G73350:ankyrin repeat protein 1Chr16:36949685–36953467 (+)8.175e-11
Glyma.17G004500 hypothetical protein AT5G47800:AT5G47800:Phototropic-responsive NPH3 family protein 1Chr17:444580–451107 (-)6.655e-11
Glyma.17G005900 hypothetical protein AT4G17215:AT4G17215:Pollen Ole e 1 allergen and extensin family protein__AT2G40113:AT2G40113:Pollen Ole e 1 allergen an… 1Chr17:546212–548525 (+)6.655e-11
Glyma.17G199600 hypothetical protein AT2G45330:emb1067:RNA 2'-phosphotransferase, Tpt1 / KptA family 1Chr17:31731965–31738073 (+)5.494e-11
Glyma.17G200400 hypothetical protein NA 1Chr17:31864566–31869426 (-)5.494e-11
Glyma.17G201000 hypothetical protein AT3G49600:UBP26:ubiquitin-specific protease 26 1Chr17:31946807–31956876 (-)5.494e-11
Glyma.17G203300 hypothetical protein NA 1Chr17:32451012–32452744 (+)6.86e-11
Glyma.17G217000 hypothetical protein NA 1Chr17:36553695–36556013 (+)6.711e-11
Glyma.17G217100 hypothetical protein NA 1Chr17:36599289–36605544 (+)6.711e-11
Glyma.17G217800 hypothetical protein NA 1Chr17:36740653–36743352 (-)6.711e-11
Glyma.17G218400 hypothetical protein NA 1Chr17:36900654–36906204 (+)5.223e-11
Glyma.17G251200 hypothetical protein NA 1Chr17:40605249–40607536 (+)9.721e-11
Glyma.17G251700 hypothetical protein NA 1Chr17:40625907–40628028 (-)9.721e-11
Glyma.18G251900 hypothetical protein AT3G60320:AT3G60320:bZIP domain class transcription factor (DUF630 and DUF632)__AT1G02110:AT1G02110:bZIP domain class t… 1Chr18:53855786–53862322 (-)1.531e-11
Glyma.19G012100 hypothetical protein AT3G28150:TBL22:TRICHOME BIREFRINGENCE-LIKE 22 1Chr19:1155711–1161298 (-)2.881e-12
Glyma.19G012300 hypothetical protein NA 1Chr19:1165111–1173031 (-)2.881e-12
Glyma.19G187900 hypothetical protein AT2G36720:AT2G36720:Acyl-CoA N-acyltransferase with RING/FYVE/PHD-type zinc finger domain-containing protein 1Chr19:44599748–44609219 (-)2.929e-11
Glyma.19G188200 hypothetical protein NA 1Chr19:44647446–44649620 (-)6.068e-12
Glyma.20G104900 hypothetical protein NA 1Chr20:34706863–34713989 (-)1.574e-11
Glyma.20G107200 hypothetical protein AT4G38540:AT4G38540:FAD/NAD(P)-binding oxidoreductase family protein 1Chr20:34984922–34988496 (+)8.904e-11
Glyma.20G109000 hypothetical protein AT4G32640:AT4G32640:Sec23/Sec24 protein transport family protein__AT3G44340:CEF:uncharacterized protein 1Chr20:35134138–35152085 (-)6.891e-11