Soybean mGWAS DBExplore The Genetic Basis Of Soybean Metabolism Glycine max
Overview Annotation GWAS Evidence Associated genes

P28133

Metabolite ID
P28133
Deionized mass
772.3894 Da
Average m/z
773.4016
Average RT
15.4131
Adduct
[M+H]+
Association scope
Overlapping genes only
Associated genes
44
GWAS result file
Available
Open in Soybean Metabolome Repository

Candidate annotations

Search compound candidates by deionized mass and tolerance. Follow compound IDs for database records, or use name searches to explore chemistry and soybean literature. About candidate annotations

GWAS Evidence

Dataset: indexed GWAS records.

Settings

SNP counts, plot highlights, gene associations and downloads use P < 10⁻¹⁰. Changing the threshold updates this page together.

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Associated genes

44 genes linked to SNP records with P < 10⁻¹⁰ in the selected scope. Supporting SNP records are counted per feature–gene pair.

Gene ID Alias Description Arabidopsis ortholog Supporting SNP recordsGene interval (1-based)Minimum P
Glyma.17G218600 hypothetical protein NA 3Chr17:36975400–36982812 (-)1.101e-11
Glyma.07G078000 hypothetical protein NA 2Chr07:7121636–7126695 (+)1.23e-11
Glyma.14G093100 hypothetical protein NA 2Chr14:8654730–8655892 (-)5.93e-13
Glyma.03G023000 hypothetical protein AT4G00220:JLO:Lateral organ boundaries (LOB) domain family protein 1Chr03:2423540–2428634 (-)1.55e-11
Glyma.05G127500 hypothetical protein NA 1Chr05:32041345–32049554 (+)9.409e-11
Glyma.05G127800 hypothetical protein AT4G18240:SS4:starch synthase 4 1Chr05:32125404–32138244 (+)4.467e-11
Glyma.05G127900 SAD1 AT5G48870:SAD1:Small nuclear ribonucleoprotein family protein 1Chr05:32139620–32141770 (-)4.467e-11
Glyma.05G128200 hypothetical protein AT5G46330:FLS2:Leucine-rich receptor-like protein kinase family protein 1Chr05:32158034–32162343 (-)4.467e-11
Glyma.05G224700 hypothetical protein NA 1Chr05:40351005–40361888 (+)5.918e-13
Glyma.05G226000 hypothetical protein AT5G19730:AT5G19730:Pectin lyase-like superfamily protein 1Chr05:40458098–40461736 (+)1.133e-12
Glyma.06G081600 hypothetical protein AT5G11490:AT5G11490:adaptin family protein 1Chr06:6273644–6283819 (+)7.378e-11
Glyma.06G125200 hypothetical protein AT4G27940:MTM1:manganese tracking factor for mitochondrial SOD2 1Chr06:10209787–10215982 (+)7.732e-11
Glyma.06G125300 hypothetical protein AT5G24105:AGP41:arabinogalactan protein 41 1Chr06:10216506–10218901 (-)7.732e-11
Glyma.07G077900 hypothetical protein NA 1Chr07:7116774–7117750 (+)3.531e-11
Glyma.07G133000 hypothetical protein NA 1Chr07:15744395–15749808 (+)2.343e-12
Glyma.08G016700 hypothetical protein AT1G63840:AT1G63840:RING/U-box superfamily protein 1Chr08:1330226–1331366 (-)1.15e-12
Glyma.09G080200 hypothetical protein NA 1Chr09:9256042–9263239 (-)7.753e-12
Glyma.09G082000 hypothetical protein NA 1Chr09:9638564–9650178 (+)9.809e-15
Glyma.09G084300 hypothetical protein AT2G34680:AIR9:Outer arm dynein light chain 1 protein 1Chr09:10129602–10197250 (-)1.51e-13
Glyma.12G202200 hypothetical protein AT2G20860:LIP1:lipoic acid synthase 1 1Chr12:36267599–36271584 (+)4.316e-11
Glyma.12G202300 hypothetical protein NA 1Chr12:36275438–36276838 (+)4.316e-11
Glyma.12G203300 hypothetical protein AT4G03430:EMB2770:pre-mRNA splicing factor-like protein 1Chr12:36371465–36377700 (-)8.782e-11
Glyma.12G203600 EXPB8 AT2G20750:EXPB1:expansin B1 1Chr12:36390283–36394245 (-)1.078e-12
Glyma.12G204000 hypothetical protein AT1G03687:AT1G03687:DTW domain-containing protein 1Chr12:36428558–36432835 (+)6.231e-11
Glyma.12G204400 hypothetical protein AT4G03560:TPC1:two-pore channel 1 1Chr12:36473422–36498915 (+)6.231e-11
Glyma.13G135300 hypothetical protein NA 1Chr13:24770681–24773826 (+)6.647e-11
Glyma.13G135400 hypothetical protein AT5G12130:PDE149:integral membrane TerC family protein 1Chr13:24786242–24791938 (+)6.647e-11
Glyma.13G135700 hypothetical protein NA 1Chr13:24812720–24818735 (+)6.647e-11
Glyma.13G135800 hypothetical protein AT5G02800:CDL1:Protein kinase superfamily protein 1Chr13:24820151–24823999 (-)6.647e-11
Glyma.14G069500 hypothetical protein AT5G37810:NIP4;1:NOD26-like intrinsic protein 4;1 1Chr14:5822246–5825628 (-)4.689e-12
Glyma.15G121100 hypothetical protein NA 1Chr15:9567797–9570248 (+)1.193e-11
Glyma.15G121300 hypothetical protein AT5G47760:PGLP2:2-phosphoglycolate phosphatase 2 1Chr15:9584685–9590201 (-)4.324e-15
Glyma.15G121500 hypothetical protein AT1G03370:AT1G03370:C2 calcium/lipid-binding and GRAM domain containing protein 1Chr15:9602794–9615281 (+)1.193e-11
Glyma.15G121800 hypothetical protein NA 1Chr15:9643746–9648073 (+)1.193e-11
Glyma.15G140400 hypothetical protein NA 1Chr15:11495189–11495691 (+)6.598e-11
Glyma.15G141100 hypothetical protein NA 1Chr15:11554310–11555089 (+)3.57e-12
Glyma.16G025300 hypothetical protein NA 1Chr16:2438122–2440528 (-)8.238e-11
Glyma.16G025400 hypothetical protein AT2G46430:CNGC3:cyclic nucleotide gated channel 3 1Chr16:2443212–2450834 (-)8.238e-11
Glyma.16G116200 hypothetical protein AT4G35560:DAW1:Transducin/WD40 repeat-like superfamily protein 1Chr16:25892277–25904773 (+)3.528e-11
Glyma.16G121500 hypothetical protein NA 1Chr16:27007186–27010856 (+)4.153e-11
Glyma.17G218700 hypothetical protein NA 1Chr17:36986191–36991558 (-)1.101e-11
Glyma.19G128100 hypothetical protein NA 1Chr19:38728037–38732422 (+)7.442e-11
Glyma.19G128200 hypothetical protein NA 1Chr19:38739769–38743404 (+)3.978e-14
Glyma.20G019500 hypothetical protein AT1G21065:AT1G21065:secondary thiamine-phosphate synthase enzyme 1Chr20:2039210–2040459 (+)6.076e-11