Overview Annotation GWAS Evidence Associated genes

P28012

Metabolite ID
P28012
Deionized mass
511.2576 Da
Average m/z
512.2650
Average RT
15.3791
Adduct
[M+H]+
Association scope
Overlapping genes only
Associated genes
53
GWAS result file
Available

Candidate annotations

Search compound candidates by deionized mass and tolerance. Follow compound IDs for database records, or use name searches to explore chemistry and soybean literature. About candidate annotations

GWAS Evidence

Dataset: indexed GWAS records.

Settings

SNP counts, plot highlights, gene associations and downloads use P < 10⁻¹⁰. Changing the threshold updates this page together.

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This Q–Q plot describes the indexed records. For downsampled files, it does not represent the distribution across all tested variants. Data coverage

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Associated genes

53 genes linked to SNP records with P < 10⁻¹⁰ in the selected scope. Supporting SNP records are counted per feature–gene pair.

Gene ID Alias Description Arabidopsis ortholog Supporting SNP recordsGene interval (1-based)Minimum P
Glyma.06G201700 hypothetical protein NA 3Chr06:18577883–18617874 (+)3.437e-13
Glyma.16G118400 hypothetical protein AT2G17190:AT2G17190:ubiquitin family protein 3Chr16:26356863–26371741 (-)2.033e-12
Glyma.16G147900 hypothetical protein NA 3Chr16:30864919–30872425 (+)4.394e-11
Glyma.03G251100 hypothetical protein AT3G04490:AT3G04490:exportin-4 protein 2Chr03:44673965–44702804 (-)3.888e-13
Glyma.06G307900 hypothetical protein NA 2Chr06:49664901–49674729 (+)2.579e-11
Glyma.13G201600 hypothetical protein NA 2Chr13:31521512–31522992 (+)6.641e-13
Glyma.14G093100 hypothetical protein NA 2Chr14:8654730–8655892 (-)1.586e-13
Glyma.16G118100 hypothetical protein AT2G17570:cPT1:Undecaprenyl pyrophosphate synthetase family protein 2Chr16:26324650–26336836 (+)2.033e-12
Glyma.02G205300 hypothetical protein NA 1Chr02:39037472–39038396 (-)6.655e-14
Glyma.03G023000 hypothetical protein AT4G00220:JLO:Lateral organ boundaries (LOB) domain family protein 1Chr03:2423540–2428634 (-)7.61e-12
Glyma.03G250400 hypothetical protein AT3G04470:AT3G04470:Ankyrin repeat family protein 1Chr03:44616824–44621636 (-)6.02e-11
Glyma.05G236700 hypothetical protein AT4G33760:AT4G33760:tRNA synthetase class II (D, K and N) family protein 1Chr05:41301540–41310727 (+)2.974e-11
Glyma.05G237800 hypothetical protein AT1G48790:AMSH1:associated molecule with the SH3 domain of STAM 1 1Chr05:41406807–41413022 (-)4.581e-12
Glyma.06G112300 hypothetical protein AT1G44780:AT1G44780:translation initiation factor__AT4G08310:AT4G08310:DNA ligase 1Chr06:9113982–9118848 (-)8.426e-11
Glyma.06G112600 hypothetical protein AT1G77620:AT1G77620:P-loop containing nucleoside triphosphate hydrolases superfamily protein 1Chr06:9134358–9144986 (+)8.426e-11
Glyma.06G112700 hypothetical protein AT1G44760:AT1G44760:Adenine nucleotide alpha hydrolases-like superfamily protein 1Chr06:9156973–9158659 (+)8.426e-11
Glyma.06G202000 hypothetical protein AT5G07940:AT5G07940:dentin sialophosphoprotein-like protein 1Chr06:18655235–18667810 (-)9.986e-12
Glyma.06G275800 hypothetical protein AT2G30980:SKdZeta:SHAGGY-related protein kinase dZeta 1Chr06:46677753–46682900 (-)7.211e-12
Glyma.06G313500 hypothetical protein NA 1Chr06:50191600–50203098 (-)2.166e-12
Glyma.07G015700 hypothetical protein AT1G79750:NADP-ME4:NADP-malic enzyme 4 1Chr07:1244977–1251198 (-)2.499e-16
Glyma.09G080200 hypothetical protein NA 1Chr09:9256042–9263239 (-)1.431e-11
Glyma.09G082000 hypothetical protein NA 1Chr09:9638564–9650178 (+)3.353e-16
Glyma.09G084300 hypothetical protein AT2G34680:AIR9:Outer arm dynein light chain 1 protein 1Chr09:10129602–10197250 (-)7.162e-16
Glyma.10G078700 hypothetical protein NA 1Chr10:8882318–8903950 (+)4.415e-12
Glyma.10G079100 hypothetical protein NA 1Chr10:8960669–8962364 (-)4.415e-12
Glyma.10G079800 hypothetical protein NA 1Chr10:9223520–9228511 (-)4.415e-12
Glyma.10G080000 hypothetical protein AT3G11660:NHL1:NDR1/HIN1-like 1__AT3G52470:AT3G52470:Late embryosis abundant (LEA) hydroxyproline-rich glycoprotein fam… 1Chr10:9258476–9260697 (-)4.415e-12
Glyma.10G081200 hypothetical protein NA 1Chr10:9600771–9603988 (-)1.681e-12
Glyma.10G081700 hypothetical protein NA 1Chr10:9752508–9758422 (+)3.389e-13
Glyma.11G127100 hypothetical protein AT1G06040:STO:B-box zinc finger family protein 1Chr11:9656242–9659517 (+)6.283e-11
Glyma.11G127200 hypothetical protein AT3G59480:AT3G59480:pfkB-like carbohydrate kinase family protein 1Chr11:9660434–9665570 (-)6.283e-11
Glyma.11G127300 hypothetical protein AT2G28480:AT2G28480:RNA-binding CRS1 / YhbY (CRM) domain protein 1Chr11:9667918–9671917 (-)6.283e-11
Glyma.11G182600 hypothetical protein AT5G22400:AT5G22400:Rho GTPase activating protein with PAK-box/P21-Rho-binding domain-containing protein 1Chr11:24998933–25003549 (-)8.771e-11
Glyma.11G239000 hypothetical protein AT5G10120:AT5G10120:Ethylene insensitive 3 family protein 1Chr11:33337797–33339122 (-)1.629e-11
Glyma.13G202000 hypothetical protein NA 1Chr13:31566728–31571708 (-)2.23e-13
Glyma.15G121100 hypothetical protein NA 1Chr15:9567797–9570248 (+)1.043e-11
Glyma.15G121300 hypothetical protein AT5G47760:PGLP2:2-phosphoglycolate phosphatase 2 1Chr15:9584685–9590201 (-)1.514e-11
Glyma.15G121500 hypothetical protein AT1G03370:AT1G03370:C2 calcium/lipid-binding and GRAM domain containing protein 1Chr15:9602794–9615281 (+)1.043e-11
Glyma.15G121800 hypothetical protein NA 1Chr15:9643746–9648073 (+)1.043e-11
Glyma.15G124500 MLO-like protein 13 AT4G24250:MLO13:Seven transmembrane MLO family protein 1Chr15:9888761–9894068 (-)1.804e-16
Glyma.15G139000 hypothetical protein NA 1Chr15:11314329–11317181 (-)6.351e-11
Glyma.16G020200 hypothetical protein NA 1Chr16:1828561–1835982 (-)8.506e-11
Glyma.16G116200 hypothetical protein AT4G35560:DAW1:Transducin/WD40 repeat-like superfamily protein 1Chr16:25892277–25904773 (+)9.33e-12
Glyma.16G116500 hypothetical protein AT4G16444:AT4G16444:tail-anchored protein insertion receptor WRB-like protein 1Chr16:26057276–26069534 (+)9.595e-13
Glyma.16G117400 hypothetical protein NA 1Chr16:26234552–26238233 (-)1.044e-12
Glyma.16G118200 hypothetical protein NA 1Chr16:26337169–26338323 (+)2.033e-12
Glyma.16G118600 hypothetical protein NA 1Chr16:26442194–26445922 (+)2.033e-12
Glyma.16G119300 hypothetical protein NA 1Chr16:26643902–26644416 (+)4.29e-11
Glyma.16G119400 hypothetical protein NA 1Chr16:26684278–26687087 (+)5.168e-11
Glyma.16G158300 hypothetical protein AT5G43140:AT5G43140:Peroxisomal membrane 22 kDa (Mpv17/PMP22) family protein 1Chr16:31859405–31862567 (+)4.841e-11
Glyma.16G158400 hypothetical protein AT5G48100:TT10:Laccase/Diphenol oxidase family protein 1Chr16:31863760–31867327 (-)4.841e-11
Glyma.16G165300 hypothetical protein NA 1Chr16:32447317–32449688 (-)4.64e-13
Glyma.17G215500 KNAT5 NA 1Chr17:36212363–36217688 (-)9.472e-11