Overview Annotation GWAS Evidence Associated genes

P27792

Metabolite ID
P27792
Deionized mass
280.0929 Da
Average m/z
281.1003
Average RT
15.3020
Adduct
[M+H]+
Association scope
Overlapping genes only
Associated genes
6
GWAS result file
Available

Candidate annotations

Search compound candidates by deionized mass and tolerance. Follow compound IDs for database records, or use name searches to explore chemistry and soybean literature. About candidate annotations

GWAS Evidence

Dataset: indexed GWAS records.

Settings

SNP counts, plot highlights, gene associations and downloads use P < 10⁻¹⁰. Changing the threshold updates this page together.

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This Q–Q plot describes the indexed records. For downsampled files, it does not represent the distribution across all tested variants. Data coverage

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Associated genes

6 genes linked to SNP records with P < 10⁻¹⁰ in the selected scope. Supporting SNP records are counted per feature–gene pair.

Gene ID Alias Description Arabidopsis ortholog Supporting SNP recordsGene interval (1-based)Minimum P
Glyma.04G064500 hypothetical protein NA 2Chr04:5367346–5372857 (+)8.268e-13
Glyma.06G183500 hypothetical protein AT5G50000:AT5G50000:Protein kinase superfamily protein 2Chr06:15828917–15834067 (+)4.271e-13
Glyma.02G086900 hypothetical protein AT3G24130:AT3G24130:Pectin lyase-like superfamily protein 1Chr02:7553127–7557516 (-)4.021e-11
Glyma.04G064300 Tyrosyl-DNA phosphodiesterase 1 AT5G15170:TDP1:tyrosyl-DNA phosphodiesterase-like protein 1Chr04:5351566–5357225 (+)5.866e-12
Glyma.06G313500 hypothetical protein NA 1Chr06:50191600–50203098 (-)6.023e-11
Glyma.19G119200 hypothetical protein AT3G03630:CS26:cysteine synthase 26 1Chr19:37677773–37683394 (+)6.952e-11