Soybean mGWAS DBExplore The Genetic Basis Of Soybean Metabolism Glycine max
Overview Annotation GWAS Evidence Associated genes

P27660

Metabolite ID
P27660
Deionized mass
110.1079 Da
Average m/z
111.1155
Average RT
15.2788
Adduct
[M+H]+
Association scope
Overlapping genes only
Associated genes
77
GWAS result file
Available
Open in Soybean Metabolome Repository

Candidate annotations

Search compound candidates by deionized mass and tolerance. Follow compound IDs for database records, or use name searches to explore chemistry and soybean literature. About candidate annotations

GWAS Evidence

Dataset: indexed GWAS records.

Settings

SNP counts, plot highlights, gene associations and downloads use P < 10⁻¹⁰. Changing the threshold updates this page together.

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Associated genes

77 genes linked to SNP records with P < 10⁻¹⁰ in the selected scope. Supporting SNP records are counted per feature–gene pair.

Gene ID Alias Description Arabidopsis ortholog Supporting SNP recordsGene interval (1-based)Minimum P
Glyma.16G209300 hypothetical protein NA 4Chr16:36856833–36863994 (-)1.431e-12
Glyma.06G305700 hypothetical protein AT2G05710:ACO3:aconitase 3 3Chr06:49451501–49461369 (-)1.683e-12
Glyma.16G147900 hypothetical protein NA 3Chr16:30864919–30872425 (+)4.856e-12
Glyma.16G210200 hypothetical protein NA 3Chr16:36933402–36938940 (+)3.788e-11
Glyma.17G218600 hypothetical protein NA 3Chr17:36975400–36982812 (-)2.51e-11
Glyma.01G166400 hypothetical protein AT4G36080:AT4G36080:phosphotransferases/inositol or phosphatidylinositol kinase 2Chr01:50404781–50436297 (-)9.114e-11
Glyma.08G123500 hypothetical protein NA 2Chr08:9494946–9505931 (-)8.047e-12
Glyma.01G045400 hypothetical protein NA 1Chr01:5140834–5144197 (-)1.3e-13
Glyma.02G205300 hypothetical protein NA 1Chr02:39037472–39038396 (-)2.148e-11
Glyma.02G293100 hypothetical protein AT3G20800:AT3G20800:Cell differentiation, Rcd1-like protein 1Chr02:47183443–47188007 (-)7.611e-11
Glyma.03G023000 hypothetical protein AT4G00220:JLO:Lateral organ boundaries (LOB) domain family protein 1Chr03:2423540–2428634 (-)1.321e-12
Glyma.05G124700 hypothetical protein NA 1Chr05:31807311–31817648 (+)9.748e-12
Glyma.05G126400 hypothetical protein NA 1Chr05:31961493–31968339 (+)8.708e-12
Glyma.05G219200 hypothetical protein NA 1Chr05:39875137–39879113 (-)3.916e-11
Glyma.05G224200 hypothetical protein NA 1Chr05:40307329–40312025 (+)1.973e-12
Glyma.05G236400 hypothetical protein AT1G23210:GH9B6:glycosyl hydrolase 9B6__AT1G70710:GH9B1:glycosyl hydrolase 9B1 1Chr05:41274513–41279615 (-)2.076e-11
Glyma.05G236700 hypothetical protein AT4G33760:AT4G33760:tRNA synthetase class II (D, K and N) family protein 1Chr05:41301540–41310727 (+)3.519e-11
Glyma.05G237800 hypothetical protein AT1G48790:AMSH1:associated molecule with the SH3 domain of STAM 1 1Chr05:41406807–41413022 (-)1.026e-11
Glyma.06G084800 hypothetical protein NA 1Chr06:6515571–6517480 (-)8.839e-11
Glyma.06G085000 hypothetical protein NA 1Chr06:6524339–6529016 (-)8.839e-11
Glyma.06G085100 hypothetical protein NA 1Chr06:6531956–6537295 (-)8.839e-11
Glyma.06G118500 hypothetical protein NA 1Chr06:9644661–9650144 (-)7.381e-11
Glyma.06G118800 hypothetical protein NA 1Chr06:9666921–9667708 (+)7.381e-11
Glyma.06G121000 hypothetical protein NA 1Chr06:9848464–9850191 (-)1.826e-11
Glyma.06G305300 hypothetical protein NA 1Chr06:49431590–49435985 (-)1.683e-12
Glyma.06G305600 hypothetical protein NA 1Chr06:49446542–49450635 (-)1.683e-12
Glyma.07G013400 hypothetical protein AT3G21310:AT3G21310:Core-2/I-branching beta-1,6-N-acetylglucosaminyltransferase family protein 1Chr07:1028243–1033837 (-)8.813e-11
Glyma.07G013500 hypothetical protein NA 1Chr07:1036819–1041984 (-)8.813e-11
Glyma.08G016700 hypothetical protein AT1G63840:AT1G63840:RING/U-box superfamily protein 1Chr08:1330226–1331366 (-)1.146e-15
Glyma.08G109000 SUB1 NA 1Chr08:8364770–8373803 (-)4.639e-11
Glyma.08G110000 hypothetical protein AT3G23840:AT3G23840:HXXXD-type acyl-transferase family protein 1Chr08:8438346–8442806 (-)4.639e-11
Glyma.08G117500 hypothetical protein AT4G18780:IRX1:cellulose synthase family protein 1Chr08:9065033–9071774 (-)4.668e-11
Glyma.08G118400 hypothetical protein AT4G18810:AT4G18810:NAD(P)-binding Rossmann-fold superfamily protein 1Chr08:9147404–9153858 (-)4.668e-11
Glyma.08G122000 hypothetical protein AT5G46400:PRP39-2:Tetratricopeptide repeat (TPR)-like superfamily protein 1Chr08:9397717–9410004 (+)1.428e-12
Glyma.08G122200 hypothetical protein NA 1Chr08:9416766–9429995 (-)8.047e-12
Glyma.08G122300 hypothetical protein AT1G29390:COR314-TM2:cold regulated 314 thylakoid membrane 2 1Chr08:9435391–9437279 (+)8.047e-12
Glyma.08G122500 hypothetical protein NA 1Chr08:9441329–9445315 (-)8.047e-12
Glyma.08G122700 hypothetical protein AT1G29350:AT1G29350:RNA polymerase II degradation factor-like protein (DUF1296) 1Chr08:9452604–9458932 (+)8.047e-12
Glyma.08G148500 hypothetical protein AT3G19860:bHLH121:basic helix-loop-helix (bHLH) DNA-binding superfamily protein 1Chr08:11362991–11368184 (-)1.337e-11
Glyma.09G058900 hypothetical protein NA 1Chr09:5397968–5404650 (-)3.241e-12
Glyma.10G081200 hypothetical protein NA 1Chr10:9600771–9603988 (-)9.752e-11
Glyma.10G081700 hypothetical protein NA 1Chr10:9752508–9758422 (+)2.288e-12
Glyma.11G125600 hypothetical protein AT2G46200:AT2G46200:U11/U12 small nuclear ribonucleoprotein 1Chr11:9540747–9545520 (-)6.804e-11
Glyma.12G095500 hypothetical protein AT3G44150:AT3G44150:Expp1 protein 1Chr12:8023570–8027770 (-)4.619e-11
Glyma.12G114500 hypothetical protein AT4G22930:PYR4:pyrimidin 4 1Chr12:11396572–11400825 (-)2.119e-14
Glyma.12G114900 hypothetical protein NA 1Chr12:11457987–11462951 (-)2.119e-14
Glyma.13G049100 hypothetical protein NA 1Chr13:14498952–14506408 (-)6.755e-11
Glyma.13G135500 hypothetical protein AT5G02780:GSTL1:glutathione transferase lambda 1 1Chr13:24798567–24801567 (+)4.609e-11
Glyma.13G135700 hypothetical protein NA 1Chr13:24812720–24818735 (+)4.609e-11
Glyma.13G135800 hypothetical protein AT5G02800:CDL1:Protein kinase superfamily protein 1Chr13:24820151–24823999 (-)4.609e-11
Glyma.13G201600 hypothetical protein NA 1Chr13:31521512–31522992 (+)1.974e-11
Glyma.14G071700 hypothetical protein AT1G19660:AT1G19660:Wound-responsive family protein__AT1G75380:BBD1:bifunctional nuclease in basal defense response 1 1Chr14:6037810–6041899 (+)1.658e-11
Glyma.14G071800 hypothetical protein NA 1Chr14:6040746–6041899 (-)1.658e-11
Glyma.15G124000 hypothetical protein NA 1Chr15:9845097–9849312 (-)1.268e-13
Glyma.15G124500 MLO-like protein 13 AT4G24250:MLO13:Seven transmembrane MLO family protein 1Chr15:9888761–9894068 (-)2.251e-16
Glyma.16G050500 AFB3B auxin signaling F-box 3 protein AT3G26810:AFB2:auxin signaling F-box 2 1Chr16:4853237–4856710 (+)5.943e-11
Glyma.16G139000 hypothetical protein NA 1Chr16:29623540–29631451 (+)7.038e-11
Glyma.16G139500 hypothetical protein AT5G66550:AT5G66550:Maf-like protein 1Chr16:29686243–29690410 (-)5.428e-11
Glyma.16G142300 hypothetical protein AT4G36850:AT4G36850:PQ-loop repeat family protein / transmembrane family protein 1Chr16:30086178–30091466 (-)6.524e-11
Glyma.16G147400 hypothetical protein NA 1Chr16:30817535–30821568 (+)3.757e-11
Glyma.16G182600 hypothetical protein AT5G52400:CYP715A1:cytochrome P450, family 715, subfamily A, polypeptide 1 1Chr16:34364037–34367765 (-)1.543e-12
Glyma.16G189100 hypothetical protein AT1G05190:emb2394:Ribosomal protein L6 family 1Chr16:35170253–35173950 (-)3.243e-11
Glyma.16G196400 hypothetical protein AT5G07270:XBAT33:uncharacterized protein 1Chr16:35782198–35790495 (-)9.243e-11
Glyma.16G208500 EIF6 AT3G55620:eIF6A:Translation initiation factor IF6 1Chr16:36806718–36809299 (+)3.553e-12
Glyma.16G209000 hypothetical protein NA 1Chr16:36841786–36845498 (-)2.08e-11
Glyma.16G209900 hypothetical protein NA 1Chr16:36919141–36924601 (+)3.788e-11
Glyma.16G210300 hypothetical protein AT1G73340:AT1G73340:Cytochrome P450 superfamily protein 1Chr16:36943073–36948828 (+)9.891e-13
Glyma.16G210400 hypothetical protein AT1G73350:AT1G73350:ankyrin repeat protein 1Chr16:36949685–36953467 (+)9.891e-13
Glyma.17G215500 KNAT5 NA 1Chr17:36212363–36217688 (-)5.755e-11
Glyma.17G218700 hypothetical protein NA 1Chr17:36986191–36991558 (-)2.51e-11
Glyma.18G263900 hypothetical protein AT5G15410:DND1:Cyclic nucleotide-regulated ion channel family protein 1Chr18:54907058–54912936 (-)7.836e-14
Glyma.18G266100 hypothetical protein NA 1Chr18:55052591–55056489 (-)2.718e-12
Glyma.19G188200 hypothetical protein NA 1Chr19:44647446–44649620 (-)6.83e-11
Glyma.20G019800 hypothetical protein AT1G49350:AT1G49350:pfkB-like carbohydrate kinase family protein 1Chr20:2051817–2057262 (+)7.986e-11
Glyma.20G107200 hypothetical protein AT4G38540:AT4G38540:FAD/NAD(P)-binding oxidoreductase family protein 1Chr20:34984922–34988496 (+)7.226e-11
Glyma.20G108900 hypothetical protein AT4G24175:AT4G24175:kinesin-like protein 1Chr20:35119868–35122488 (+)1.728e-11
Glyma.20G109800 hypothetical protein AT2G35130:AT2G35130:Tetratricopeptide repeat (TPR)-like superfamily protein 1Chr20:35213258–35219502 (+)2.083e-14