Overview Annotation GWAS Evidence Associated genes

P27456

Metabolite ID
P27456
Deionized mass
611.8048 Da
Average m/z
612.8113
Average RT
15.2221
Adduct
[M+H]+
Association scope
Overlapping genes only
Associated genes
23
GWAS result file
Available

Candidate annotations

Search compound candidates by deionized mass and tolerance. Follow compound IDs for database records, or use name searches to explore chemistry and soybean literature. About candidate annotations

GWAS Evidence

Dataset: indexed GWAS records.

Settings

SNP counts, plot highlights, gene associations and downloads use P < 10⁻¹⁰. Changing the threshold updates this page together.

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This Q–Q plot describes the indexed records. For downsampled files, it does not represent the distribution across all tested variants. Data coverage

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Associated genes

23 genes linked to SNP records with P < 10⁻¹⁰ in the selected scope. Supporting SNP records are counted per feature–gene pair.

Gene ID Alias Description Arabidopsis ortholog Supporting SNP recordsGene interval (1-based)Minimum P
Glyma.08G123500 hypothetical protein NA 2Chr08:9494946–9505931 (-)1.13e-11
Glyma.19G029600 hypothetical protein NA 2Chr19:3681517–3690884 (-)9.633e-12
Glyma.02G133800 hypothetical protein AT1G49660:CXE5:carboxyesterase 5 1Chr02:13850366–13851962 (-)4.355e-12
Glyma.05G137600 hypothetical protein NA 1Chr05:33018107–33020120 (-)3.667e-11
Glyma.05G226000 hypothetical protein AT5G19730:AT5G19730:Pectin lyase-like superfamily protein 1Chr05:40458098–40461736 (+)2.516e-12
Glyma.08G122200 hypothetical protein NA 1Chr08:9416766–9429995 (-)1.13e-11
Glyma.08G122300 hypothetical protein AT1G29390:COR314-TM2:cold regulated 314 thylakoid membrane 2 1Chr08:9435391–9437279 (+)1.13e-11
Glyma.08G122500 hypothetical protein NA 1Chr08:9441329–9445315 (-)1.13e-11
Glyma.08G122700 hypothetical protein AT1G29350:AT1G29350:RNA polymerase II degradation factor-like protein (DUF1296) 1Chr08:9452604–9458932 (+)1.13e-11
Glyma.08G211800 hypothetical protein NA 1Chr08:17104514–17105442 (-)1.222e-12
Glyma.08G220200 hypothetical protein AT5G48930:HCT:hydroxycinnamoyl-CoA shikimate/quinate hydroxycinnamoyl transferase 1Chr08:17889781–17898867 (+)2.589e-11
Glyma.10G078700 hypothetical protein NA 1Chr10:8882318–8903950 (+)7.28e-11
Glyma.10G079100 hypothetical protein NA 1Chr10:8960669–8962364 (-)7.28e-11
Glyma.10G079800 hypothetical protein NA 1Chr10:9223520–9228511 (-)7.28e-11
Glyma.10G080000 hypothetical protein AT3G11660:NHL1:NDR1/HIN1-like 1__AT3G52470:AT3G52470:Late embryosis abundant (LEA) hydroxyproline-rich glycoprotein fam… 1Chr10:9258476–9260697 (-)7.28e-11
Glyma.10G081700 hypothetical protein NA 1Chr10:9752508–9758422 (+)9.861e-12
Glyma.14G177200 hypothetical protein AT4G09010:TL29:ascorbate peroxidase 4 1Chr14:43667263–43674131 (-)2.94e-12
Glyma.14G177500 hypothetical protein AT3G13620:PUT4:Amino acid permease family protein 1Chr14:43740577–43742476 (-)7.307e-14
Glyma.15G121100 hypothetical protein NA 1Chr15:9567797–9570248 (+)9.909e-11
Glyma.15G121500 hypothetical protein AT1G03370:AT1G03370:C2 calcium/lipid-binding and GRAM domain containing protein 1Chr15:9602794–9615281 (+)9.909e-11
Glyma.15G121800 hypothetical protein NA 1Chr15:9643746–9648073 (+)9.909e-11
Glyma.17G064000 hypothetical protein AT2G18840:AT2G18840:Integral membrane Yip1 family protein__AT4G30260:AT4G30260:Integral membrane Yip1 family protein 1Chr17:4924830–4930155 (-)8.307e-12
Glyma.17G064200 hypothetical protein AT5G57500:AT5G57500:Galactosyltransferase family protein 1Chr17:4943412–4944357 (-)8.307e-12