Soybean mGWAS DBExplore The Genetic Basis Of Soybean Metabolism Glycine max
Overview Annotation GWAS Evidence Associated genes

P27066

Metabolite ID
P27066
Deionized mass
396.1272 Da
Average m/z
397.1359
Average RT
15.0928
Adduct
[M+H]+
Association scope
Overlapping genes only
Associated genes
62
GWAS result file
Available
Open in Soybean Metabolome Repository

Candidate annotations

Search compound candidates by deionized mass and tolerance. Follow compound IDs for database records, or use name searches to explore chemistry and soybean literature. About candidate annotations

GWAS Evidence

Dataset: indexed GWAS records.

Settings

SNP counts, plot highlights, gene associations and downloads use P < 10⁻¹⁰. Changing the threshold updates this page together.

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Associated genes

62 genes linked to SNP records with P < 10⁻¹⁰ in the selected scope. Supporting SNP records are counted per feature–gene pair.

Gene ID Alias Description Arabidopsis ortholog Supporting SNP recordsGene interval (1-based)Minimum P
Glyma.01G045600 hypothetical protein NA 3Chr01:5242432–5245038 (-)1.311e-11
Glyma.09G252300 hypothetical protein AT5G16520:AT5G16520:uncharacterized protein 2Chr09:47254519–47261787 (-)8.925e-11
Glyma.16G078200 hypothetical protein AT3G21600:AT3G21600:Senescence/dehydration-associated protein-like protein 2Chr16:8060944–8066661 (-)7.368e-11
Glyma.01G045400 hypothetical protein NA 1Chr01:5140834–5144197 (-)9.665e-11
Glyma.01G045700 hypothetical protein AT1G69680:AT1G69680:ran guanine nucleotide release factor, putative (Mog1/PsbP/DUF1795-like photosystem II reaction cen… 1Chr01:5265956–5271379 (-)1.311e-11
Glyma.02G222400 hypothetical protein AT2G36460:FBA6:Aldolase superfamily protein 1Chr02:40998557–41001678 (-)8.979e-11
Glyma.03G023000 hypothetical protein AT4G00220:JLO:Lateral organ boundaries (LOB) domain family protein 1Chr03:2423540–2428634 (-)9.503e-11
Glyma.04G116900 hypothetical protein NA 1Chr04:13696275–13700803 (+)4.951e-11
Glyma.06G112300 hypothetical protein AT1G44780:AT1G44780:translation initiation factor__AT4G08310:AT4G08310:DNA ligase 1Chr06:9113982–9118848 (-)4.778e-12
Glyma.06G112600 hypothetical protein AT1G77620:AT1G77620:P-loop containing nucleoside triphosphate hydrolases superfamily protein 1Chr06:9134358–9144986 (+)4.778e-12
Glyma.06G112700 hypothetical protein AT1G44760:AT1G44760:Adenine nucleotide alpha hydrolases-like superfamily protein 1Chr06:9156973–9158659 (+)4.778e-12
Glyma.08G016700 hypothetical protein AT1G63840:AT1G63840:RING/U-box superfamily protein 1Chr08:1330226–1331366 (-)2.2e-12
Glyma.08G114700 hypothetical protein AT3G13600:AT3G13600:calmodulin-binding family protein 1Chr08:8768854–8772973 (-)8.808e-11
Glyma.08G114800 hypothetical protein AT5G19830:AT5G19830:Peptidyl-tRNA hydrolase family protein 1Chr08:8792663–8798214 (-)3.554e-11
Glyma.08G122200 hypothetical protein NA 1Chr08:9416766–9429995 (-)2.103e-11
Glyma.08G122600 hypothetical protein NA 1Chr08:9445153–9450502 (+)2.103e-11
Glyma.09G058900 hypothetical protein NA 1Chr09:5397968–5404650 (-)2.956e-11
Glyma.09G080200 hypothetical protein NA 1Chr09:9256042–9263239 (-)2.308e-11
Glyma.09G082000 hypothetical protein NA 1Chr09:9638564–9650178 (+)6.11e-11
Glyma.09G249500 hypothetical protein NA 1Chr09:47056885–47062577 (+)1.041e-12
Glyma.09G252000 hypothetical protein AT2G40730:CTEXP:kinase family with ARM repeat domain-containing protein 1Chr09:47233101–47242848 (+)9.469e-11
Glyma.09G252100 hypothetical protein AT1G79790:FHY1:Haloacid dehalogenase-like hydrolase (HAD) superfamily protein 1Chr09:47245185–47248478 (+)5.615e-12
Glyma.09G252400 hypothetical protein NA 1Chr09:47260143–47260334 (+)8.925e-11
Glyma.09G253800 hypothetical protein NA 1Chr09:47356240–47357763 (-)1.442e-13
Glyma.09G253900 hypothetical protein NA 1Chr09:47359742–47364806 (-)1.442e-13
Glyma.09G255700 hypothetical protein AT1G01540:AT1G01540:Protein kinase superfamily protein__AT4G01330:AT4G01330:Protein kinase superfamily protein 1Chr09:47507850–47511743 (+)6.804e-13
Glyma.10G078700 hypothetical protein NA 1Chr10:8882318–8903950 (+)9.585e-11
Glyma.10G079100 hypothetical protein NA 1Chr10:8960669–8962364 (-)9.585e-11
Glyma.10G079800 hypothetical protein NA 1Chr10:9223520–9228511 (-)9.585e-11
Glyma.10G080000 hypothetical protein AT3G11660:NHL1:NDR1/HIN1-like 1__AT3G52470:AT3G52470:Late embryosis abundant (LEA) hydroxyproline-rich glycoprotein fam… 1Chr10:9258476–9260697 (-)9.585e-11
Glyma.10G081200 hypothetical protein NA 1Chr10:9600771–9603988 (-)6.055e-11
Glyma.10G081700 hypothetical protein NA 1Chr10:9752508–9758422 (+)1.557e-12
Glyma.10G238200 hypothetical protein AT5G07250:RBL3:RHOMBOID-like protein 3 1Chr10:46680865–46684088 (+)3.742e-11
Glyma.11G048300 hypothetical protein AT4G37640:ACA2:calcium ATPase 2 1Chr11:3601241–3607177 (+)8.491e-11
Glyma.11G049700 hypothetical protein NA 1Chr11:3731308–3734534 (+)2.06e-11
Glyma.11G050300 hypothetical protein AT2G23093:AT2G23093:Major facilitator superfamily protein 1Chr11:3765453–3771565 (+)4.324e-11
Glyma.11G050500 hypothetical protein AT5G67370:CGLD27:DUF1230 family protein (DUF1230) 1Chr11:3778152–3782174 (+)4.324e-11
Glyma.11G050600 hypothetical protein NA 1Chr11:3779988–3786583 (-)4.324e-11
Glyma.11G051600 hypothetical protein NA 1Chr11:3857225–3859564 (-)4.324e-11
Glyma.14G075900 hypothetical protein NA 1Chr14:6362111–6364010 (-)7.866e-11
Glyma.14G087900 hypothetical protein NA 1Chr14:7887761–7897469 (+)2.879e-11
Glyma.15G121100 hypothetical protein NA 1Chr15:9567797–9570248 (+)1.569e-12
Glyma.15G121300 hypothetical protein AT5G47760:PGLP2:2-phosphoglycolate phosphatase 2 1Chr15:9584685–9590201 (-)2.809e-12
Glyma.15G121500 hypothetical protein AT1G03370:AT1G03370:C2 calcium/lipid-binding and GRAM domain containing protein 1Chr15:9602794–9615281 (+)1.569e-12
Glyma.15G121800 hypothetical protein NA 1Chr15:9643746–9648073 (+)1.569e-12
Glyma.15G256300 hypothetical protein NA 1Chr15:48546007–48547401 (-)3.712e-11
Glyma.16G025300 hypothetical protein NA 1Chr16:2438122–2440528 (-)3.942e-11
Glyma.16G025400 hypothetical protein AT2G46430:CNGC3:cyclic nucleotide gated channel 3 1Chr16:2443212–2450834 (-)3.942e-11
Glyma.16G105100 hypothetical protein NA 1Chr16:21259552–21267517 (-)1.385e-11
Glyma.16G105400 hypothetical protein AT2G43040:NPG1:tetratricopeptide repeat (TPR)-containing protein 1Chr16:21357465–21364357 (-)5.352e-12
Glyma.16G138800 hypothetical protein NA 1Chr16:29609432–29615000 (+)7.271e-14
Glyma.16G139000 hypothetical protein NA 1Chr16:29623540–29631451 (+)9.933e-13
Glyma.17G064000 hypothetical protein AT2G18840:AT2G18840:Integral membrane Yip1 family protein__AT4G30260:AT4G30260:Integral membrane Yip1 family protein 1Chr17:4924830–4930155 (-)3.737e-11
Glyma.17G064200 hypothetical protein AT5G57500:AT5G57500:Galactosyltransferase family protein 1Chr17:4943412–4944357 (-)3.737e-11
Glyma.18G251900 hypothetical protein AT3G60320:AT3G60320:bZIP domain class transcription factor (DUF630 and DUF632)__AT1G02110:AT1G02110:bZIP domain class t… 1Chr18:53855786–53862322 (-)5.319e-11
Glyma.18G266500 hypothetical protein NA 1Chr18:55088284–55091427 (-)8.449e-12
Glyma.18G298600 hypothetical protein AT1G44960:AT1G44960:SNARE associated Golgi protein family 1Chr18:57614292–57617223 (+)1.158e-11
Glyma.18G298800 hypothetical protein NA 1Chr18:57633577–57639546 (+)2.657e-11
Glyma.18G299100 hypothetical protein AT5G13420:TRA2:Aldolase-type TIM barrel family protein 1Chr18:57674222–57678396 (+)1.833e-11
Glyma.18G299700 hypothetical protein AT2G43180:AT2G43180:Phosphoenolpyruvate carboxylase family protein 1Chr18:57755837–57757150 (-)1.159e-11
Glyma.18G301600 hypothetical protein AT2G33490:AT2G33490:hydroxyproline-rich glycoprotein family protein 1Chr18:57939468–57945328 (+)1.921e-11
Glyma.18G301900 hypothetical protein AT5G13190:GILP:GSH-induced LITAF domain protein 1Chr18:57953323–57956369 (-)2.143e-12