Soybean mGWAS DBExplore The Genetic Basis Of Soybean Metabolism Glycine max
Overview Annotation GWAS Evidence Associated genes

P26996

Metabolite ID
P26996
Deionized mass
661.7866 Da
Average m/z
662.7899
Average RT
15.0835
Adduct
[M+H]+
Association scope
Overlapping genes only
Associated genes
60
GWAS result file
Available
Open in Soybean Metabolome Repository

Candidate annotations

Search compound candidates by deionized mass and tolerance. Follow compound IDs for database records, or use name searches to explore chemistry and soybean literature. About candidate annotations

GWAS Evidence

Dataset: indexed GWAS records.

Settings

SNP counts, plot highlights, gene associations and downloads use P < 10⁻¹⁰. Changing the threshold updates this page together.

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Associated genes

60 genes linked to SNP records with P < 10⁻¹⁰ in the selected scope. Supporting SNP records are counted per feature–gene pair.

Gene ID Alias Description Arabidopsis ortholog Supporting SNP recordsGene interval (1-based)Minimum P
Glyma.16G147900 hypothetical protein NA 3Chr16:30864919–30872425 (+)3.261e-11
Glyma.03G018800 hypothetical protein AT2G45680:TCP9:TCP family transcription factor 2Chr03:1875182–1876855 (+)1.376e-12
Glyma.05G164700 hypothetical protein NA 2Chr05:35543931–35549196 (-)4.778e-12
Glyma.09G282900 hypothetical protein AT2G29090:CYP707A2:cytochrome P450, family 707, subfamily A, polypeptide 2 2Chr09:49863377–49871270 (+)6.696e-11
Glyma.19G011800 hypothetical protein AT3G01420:DOX1:Peroxidase superfamily protein 2Chr19:1134716–1143232 (+)6.716e-12
Glyma.01G091100 hypothetical protein AT3G25620:ABCG21:ABC-2 type transporter family protein 1Chr01:27547798–27553665 (+)2.205e-11
Glyma.01G091600 hypothetical protein NA 1Chr01:27742157–27745328 (+)2.205e-11
Glyma.01G092800 hypothetical protein NA 1Chr01:28007203–28025553 (+)2.205e-11
Glyma.01G093200 hypothetical protein AT1G26160:AT1G26160:Metal-dependent phosphohydrolase 1Chr01:28284751–28302644 (-)2.205e-11
Glyma.01G093900 hypothetical protein NA 1Chr01:28613090–28637203 (-)2.205e-11
Glyma.01G094200 hypothetical protein AT3G60240:EIF4G:eukaryotic translation initiation factor 4G 1Chr01:28799545–28809703 (+)2.205e-11
Glyma.01G094800 hypothetical protein NA 1Chr01:29243952–29260961 (+)2.205e-11
Glyma.01G096700 hypothetical protein NA 1Chr01:31374967–31380201 (+)1.275e-12
Glyma.01G097200 hypothetical protein NA 1Chr01:32004780–32010521 (-)2.205e-11
Glyma.01G097400 hypothetical protein AT4G37870:PCK1:phosphoenolpyruvate carboxykinase 1 1Chr01:32025239–32034226 (-)2.205e-11
Glyma.01G099100 hypothetical protein NA 1Chr01:33017228–33023840 (+)4.403e-11
Glyma.01G099600 hypothetical protein AT3G53930:AT3G53930:Protein kinase superfamily protein__AT2G37840:AT2G37840:Protein kinase superfamily protein 1Chr01:33115843–33125726 (-)4.403e-11
Glyma.01G099900 hypothetical protein NA 1Chr01:33275414–33282430 (+)4.403e-11
Glyma.01G169700 hypothetical protein AT4G36410:UBC17:ubiquitin-conjugating enzyme 17 1Chr01:50715084–50719427 (-)3.737e-11
Glyma.01G169800 hypothetical protein AT4G36400:D2HGDH:FAD-linked oxidases family protein 1Chr01:50726088–50733347 (-)3.737e-11
Glyma.03G021600 hypothetical protein AT2G45510:CYP704A2:cytochrome P450, family 704, subfamily A, polypeptide 2__AT2G44890:CYP704A1:cytochrome P450, family … 1Chr03:2240686–2246512 (-)5.739e-11
Glyma.03G021700 hypothetical protein AT2G45490:AUR3:ataurora3 1Chr03:2248429–2251737 (+)4.124e-12
Glyma.03G022100 hypothetical protein AT4G32430:AT4G32430:Pentatricopeptide repeat (PPR) superfamily protein 1Chr03:2301675–2307263 (+)6.054e-13
Glyma.03G023000 hypothetical protein AT4G00220:JLO:Lateral organ boundaries (LOB) domain family protein 1Chr03:2423540–2428634 (-)2.666e-12
Glyma.04G084800 hypothetical protein AT5G11630:NOXY2:uncharacterized protein 1Chr04:7187985–7192897 (+)3.208e-11
Glyma.04G116900 hypothetical protein NA 1Chr04:13696275–13700803 (+)8.338e-11
Glyma.04G190200 hypothetical protein AT3G48330:PIMT1:protein-l-isoaspartate methyltransferase 1 1Chr04:46086785–46089618 (-)3.189e-11
Glyma.05G165200 hypothetical protein NA 1Chr05:35586701–35592272 (+)2.06e-11
Glyma.05G165300 hypothetical protein AT1G29350:AT1G29350:RNA polymerase II degradation factor-like protein (DUF1296) 1Chr05:35593651–35600917 (+)2.06e-11
Glyma.05G166000 hypothetical protein NA 1Chr05:35657133–35657621 (-)2.06e-11
Glyma.05G166400 hypothetical protein NA 1Chr05:35692494–35699192 (+)9.127e-11
Glyma.06G084800 hypothetical protein NA 1Chr06:6515571–6517480 (-)3.711e-12
Glyma.06G085000 hypothetical protein NA 1Chr06:6524339–6529016 (-)3.711e-12
Glyma.06G085100 hypothetical protein NA 1Chr06:6531956–6537295 (-)3.711e-12
Glyma.06G085200 hypothetical protein NA 1Chr06:6540849–6545557 (+)4.252e-12
Glyma.06G129800 hypothetical protein AT5G53030:AT5G53030:uncharacterized protein 1Chr06:10667029–10669377 (+)8.621e-11
Glyma.06G130100 hypothetical protein AT3G49290:ABIL2:ABL interactor-like protein 2 1Chr06:10695256–10699675 (+)8.621e-11
Glyma.06G130300 hypothetical protein AT5G53080:AT5G53080:Tetratricopeptide repeat (TPR)-like superfamily protein 1Chr06:10709045–10716245 (-)8.021e-11
Glyma.07G087700 hypothetical protein AT3G24495:MSH7:MUTS homolog 7 1Chr07:8111751–8121053 (+)3.694e-12
Glyma.07G091400 COL21 CONSTANS-like zinc finger protein AT1G25440:BBX15:B-box type zinc finger protein with CCT domain-containing protein 1Chr07:8539101–8547001 (+)4.123e-11
Glyma.08G114700 hypothetical protein AT3G13600:AT3G13600:calmodulin-binding family protein 1Chr08:8768854–8772973 (-)1.398e-11
Glyma.09G200300 hypothetical protein NA 1Chr09:42466263–42471449 (+)2.198e-12
Glyma.09G202900 hypothetical protein AT5G10560:AT5G10560:Glycosyl hydrolase family protein 1Chr09:42685911–42690981 (-)2.723e-12
Glyma.09G251800 hypothetical protein AT1G65380:CLV2:Leucine-rich repeat (LRR) family protein 1Chr09:47220796–47224266 (+)7.735e-11
Glyma.12G049300 hypothetical protein NA 1Chr12:3538428–3539170 (-)1.149e-11
Glyma.14G013500 hypothetical protein AT4G25434:NUDT10:nudix hydrolase homolog 10 1Chr14:1009519–1014238 (+)3.253e-11
Glyma.14G066800 hypothetical protein NA 1Chr14:5511222–5513114 (+)4.026e-11
Glyma.14G069500 hypothetical protein AT5G37810:NIP4;1:NOD26-like intrinsic protein 4;1 1Chr14:5822246–5825628 (-)1.872e-11
Glyma.14G071600 hypothetical protein AT1G27620:AT1G27620:HXXXD-type acyl-transferase family protein 1Chr14:6016839–6019954 (+)8.231e-11
Glyma.14G075900 hypothetical protein NA 1Chr14:6362111–6364010 (-)1.366e-14
Glyma.14G134600 hypothetical protein AT4G31450:AT4G31450:RING/U-box superfamily protein 1Chr14:23491895–23497735 (-)4.431e-11
Glyma.14G135100 hypothetical protein AT4G31540:EXO70G1:exocyst subunit exo70 family protein G1 1Chr14:23623422–23626499 (-)2.005e-11
Glyma.14G135400 hypothetical protein AT2G24570:WRKY17:WRKY DNA-binding protein 17 1Chr14:23729201–23732285 (-)7.214e-11
Glyma.15G124000 hypothetical protein NA 1Chr15:9845097–9849312 (-)4.15e-12
Glyma.15G124500 MLO-like protein 13 AT4G24250:MLO13:Seven transmembrane MLO family protein 1Chr15:9888761–9894068 (-)1.145e-12
Glyma.16G025300 hypothetical protein NA 1Chr16:2438122–2440528 (-)2.259e-12
Glyma.16G025400 hypothetical protein AT2G46430:CNGC3:cyclic nucleotide gated channel 3 1Chr16:2443212–2450834 (-)2.259e-12
Glyma.16G166900 hypothetical protein NA 1Chr16:32619260–32629262 (-)4.416e-11
Glyma.18G242900 hypothetical protein NA 1Chr18:53113341–53119592 (-)9.348e-11
Glyma.19G011900 hypothetical protein AT3G28140:AT3G28140:RNA ligase/cyclic nucleotide phosphodiesterase family protein__AT5G40190:AT5G40190:RNA ligase/cycli… 1Chr19:1148510–1149495 (+)9.282e-11