Soybean mGWAS DBExplore The Genetic Basis Of Soybean Metabolism Glycine max
Overview Annotation GWAS Evidence Associated genes

P26708

Metabolite ID
P26708
Deionized mass
507.1389 Da
Average m/z
508.1502
Average RT
15.0518
Adduct
[M+H]+
Association scope
Overlapping genes only
Associated genes
42
GWAS result file
Available
Open in Soybean Metabolome Repository

Candidate annotations

Search compound candidates by deionized mass and tolerance. Follow compound IDs for database records, or use name searches to explore chemistry and soybean literature. About candidate annotations

GWAS Evidence

Dataset: indexed GWAS records.

Settings

SNP counts, plot highlights, gene associations and downloads use P < 10⁻¹⁰. Changing the threshold updates this page together.

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Associated genes

42 genes linked to SNP records with P < 10⁻¹⁰ in the selected scope. Supporting SNP records are counted per feature–gene pair.

Gene ID Alias Description Arabidopsis ortholog Supporting SNP recordsGene interval (1-based)Minimum P
Glyma.13G135700 hypothetical protein NA 2Chr13:24812720–24818735 (+)3.158e-11
Glyma.13G135800 hypothetical protein AT5G02800:CDL1:Protein kinase superfamily protein 2Chr13:24820151–24823999 (-)3.158e-11
Glyma.16G111500 hypothetical protein AT4G35500:AT4G35500:Protein kinase superfamily protein 2Chr16:24626024–24635513 (+)3.91e-11
Glyma.16G146700 hypothetical protein NA 2Chr16:30755899–30759360 (-)5.031e-15
Glyma.01G169700 hypothetical protein AT4G36410:UBC17:ubiquitin-conjugating enzyme 17 1Chr01:50715084–50719427 (-)1.1e-11
Glyma.01G169800 hypothetical protein AT4G36400:D2HGDH:FAD-linked oxidases family protein 1Chr01:50726088–50733347 (-)1.1e-11
Glyma.03G016900 hypothetical protein NA 1Chr03:1702419–1707451 (+)3.836e-12
Glyma.03G017000 hypothetical protein AT3G61060:PP2-A13:phloem protein 2-A13 1Chr03:1716204–1719596 (+)3.209e-11
Glyma.03G017500 hypothetical protein NA 1Chr03:1761083–1762800 (+)6.569e-11
Glyma.03G124500 hypothetical protein NA 1Chr03:33758928–33762195 (+)5.773e-11
Glyma.03G147400 hypothetical protein NA 1Chr03:36293698–36295294 (+)4.62e-13
Glyma.05G029900 hypothetical protein AT5G62730:AT5G62730:Major facilitator superfamily protein 1Chr05:2565716–2569741 (-)5.596e-11
Glyma.05G236400 hypothetical protein AT1G23210:GH9B6:glycosyl hydrolase 9B6__AT1G70710:GH9B1:glycosyl hydrolase 9B1 1Chr05:41274513–41279615 (-)7.808e-14
Glyma.05G236700 hypothetical protein AT4G33760:AT4G33760:tRNA synthetase class II (D, K and N) family protein 1Chr05:41301540–41310727 (+)1.046e-13
Glyma.05G237800 hypothetical protein AT1G48790:AMSH1:associated molecule with the SH3 domain of STAM 1 1Chr05:41406807–41413022 (-)4.612e-11
Glyma.06G261900 hypothetical protein NA 1Chr06:44875369–44879702 (-)6.228e-11
Glyma.06G317100 hypothetical protein AT5G61520:AT5G61520:Major facilitator superfamily protein 1Chr06:50586679–50589765 (+)5.823e-11
Glyma.09G249500 hypothetical protein NA 1Chr09:47056885–47062577 (+)1.267e-14
Glyma.09G251800 hypothetical protein AT1G65380:CLV2:Leucine-rich repeat (LRR) family protein 1Chr09:47220796–47224266 (+)1.506e-13
Glyma.09G252000 hypothetical protein AT2G40730:CTEXP:kinase family with ARM repeat domain-containing protein 1Chr09:47233101–47242848 (+)3.143e-12
Glyma.09G252300 hypothetical protein AT5G16520:AT5G16520:uncharacterized protein 1Chr09:47254519–47261787 (-)3.143e-12
Glyma.11G095100 hypothetical protein NA 1Chr11:7212438–7214276 (-)2.173e-11
Glyma.13G135300 hypothetical protein NA 1Chr13:24770681–24773826 (+)9.391e-11
Glyma.13G135400 hypothetical protein AT5G12130:PDE149:integral membrane TerC family protein 1Chr13:24786242–24791938 (+)9.391e-11
Glyma.13G135500 hypothetical protein AT5G02780:GSTL1:glutathione transferase lambda 1 1Chr13:24798567–24801567 (+)3.158e-11
Glyma.14G069500 hypothetical protein AT5G37810:NIP4;1:NOD26-like intrinsic protein 4;1 1Chr14:5822246–5825628 (-)5.559e-11
Glyma.14G190100 hypothetical protein AT2G04280:AT2G04280:calcium ion-binding protein 1Chr14:45502008–45504459 (+)9.273e-11
Glyma.16G106300 hypothetical protein AT5G23900:AT5G23900:Ribosomal protein L13e family protein 1Chr16:21495147–21497932 (+)4.054e-11
Glyma.16G111100 hypothetical protein NA 1Chr16:24438458–24444801 (+)3.91e-11
Glyma.16G118100 hypothetical protein AT2G17570:cPT1:Undecaprenyl pyrophosphate synthetase family protein 1Chr16:26324650–26336836 (+)9.88e-11
Glyma.16G119400 hypothetical protein NA 1Chr16:26684278–26687087 (+)5.758e-11
Glyma.16G139500 hypothetical protein AT5G66550:AT5G66550:Maf-like protein 1Chr16:29686243–29690410 (-)4.741e-12
Glyma.16G145100 hypothetical protein NA 1Chr16:30578388–30581421 (-)2.972e-11
Glyma.16G145600 hypothetical protein AT1G11310:MLO2:Seven transmembrane MLO family protein__AT2G39200:MLO12:Seven transmembrane MLO family protein__AT1G6156… 1Chr16:30652378–30659548 (+)2.972e-11
Glyma.16G146300 hypothetical protein NA 1Chr16:30714315–30716624 (+)5.031e-15
Glyma.16G179800 hypothetical protein AT5G52520:OVA6:Class II aaRS and biotin synthetases superfamily protein 1Chr16:34022480–34027055 (-)5.786e-11
Glyma.16G219700 hypothetical protein NA 1Chr16:37690133–37695529 (-)5.124e-11
Glyma.18G264000 hypothetical protein AT3G29270:AT3G29270:RING/U-box superfamily protein 1Chr18:54933280–54938718 (+)2.236e-11
Glyma.18G266100 hypothetical protein NA 1Chr18:55052591–55056489 (-)2.693e-12
Glyma.18G266500 hypothetical protein NA 1Chr18:55088284–55091427 (-)2.42e-13
Glyma.18G267500 hypothetical protein NA 1Chr18:55179516–55181798 (-)5.097e-12
Glyma.18G273000 hypothetical protein NA 1Chr18:55575628–55582063 (-)7.684e-12