P25757
Metabolite ID
P25757
Deionized mass
569.2739 Da
Average m/z
570.2799
Average RT
14.7645
Adduct
[M+H]+
Association scope
Overlapping genes only
Associated genes
100
GWAS result file
Available
Candidate annotations
Search compound candidates by deionized mass and tolerance. Follow compound IDs for database records, or use name searches to explore chemistry and soybean literature. About candidate annotations
GWAS Evidence
Dataset: indexed GWAS records.
SNP counts, plot highlights, gene associations and downloads use P < 10⁻¹⁰. Changing the threshold updates this page together.
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This Q–Q plot describes the indexed records. For downsampled files, it does not represent the distribution across all tested variants. Data coverage
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Associated genes
100 genes linked to SNP records with P < 10⁻¹⁰ in the selected scope. Supporting SNP records are counted per feature–gene pair.
| Gene ID | Alias | Description | Arabidopsis ortholog | Supporting SNP records | Gene interval (1-based) | Minimum P |
|---|---|---|---|---|---|---|
| Glyma.01G045600 | hypothetical protein | NA | 3 | Chr01:5242432–5245038 (-) | 1.028e-11 | |
| Glyma.04G084800 | hypothetical protein | AT5G11630:NOXY2:uncharacterized protein | 2 | Chr04:7187985–7192897 (+) | 8.635e-14 | |
| Glyma.12G204400 | hypothetical protein | AT4G03560:TPC1:two-pore channel 1 | 2 | Chr12:36473422–36498915 (+) | 1.982e-15 | |
| Glyma.13G053000 | hypothetical protein | AT3G02230:RGP1:reversibly glycosylated polypeptide 1 | 2 | Chr13:15046821–15050021 (+) | 3.998e-11 | |
| Glyma.13G135700 | hypothetical protein | NA | 2 | Chr13:24812720–24818735 (+) | 5.812e-14 | |
| Glyma.13G135800 | hypothetical protein | AT5G02800:CDL1:Protein kinase superfamily protein | 2 | Chr13:24820151–24823999 (-) | 5.812e-14 | |
| Glyma.14G093100 | hypothetical protein | NA | 2 | Chr14:8654730–8655892 (-) | 8.152e-12 | |
| Glyma.16G118100 | hypothetical protein | AT2G17570:cPT1:Undecaprenyl pyrophosphate synthetase family protein | 2 | Chr16:26324650–26336836 (+) | 4.408e-12 | |
| Glyma.19G011700 | hypothetical protein | AT3G01420:DOX1:Peroxidase superfamily protein | 2 | Chr19:1123637–1130946 (+) | 8.251e-12 | |
| Glyma.01G045400 | hypothetical protein | NA | 1 | Chr01:5140834–5144197 (-) | 9.412e-11 | |
| Glyma.01G045700 | hypothetical protein | AT1G69680:AT1G69680:ran guanine nucleotide release factor, putative (Mog1/PsbP/DUF1795-like photosystem II reaction cen… | 1 | Chr01:5265956–5271379 (-) | 1.028e-11 | |
| Glyma.01G169700 | hypothetical protein | AT4G36410:UBC17:ubiquitin-conjugating enzyme 17 | 1 | Chr01:50715084–50719427 (-) | 4.816e-12 | |
| Glyma.01G169800 | hypothetical protein | AT4G36400:D2HGDH:FAD-linked oxidases family protein | 1 | Chr01:50726088–50733347 (-) | 4.816e-12 | |
| Glyma.02G133800 | hypothetical protein | AT1G49660:CXE5:carboxyesterase 5 | 1 | Chr02:13850366–13851962 (-) | 1.113e-11 | |
| Glyma.02G138200 | hypothetical protein | NA | 1 | Chr02:14307786–14310106 (-) | 2.414e-11 | |
| Glyma.02G303600 | hypothetical protein | NA | 1 | Chr02:47883626–47887124 (-) | 9.615e-11 | |
| Glyma.02G303700 | hypothetical protein | NA | 1 | Chr02:47892900–47896207 (+) | 9.615e-11 | |
| Glyma.02G304000 | hypothetical protein | AT1G51350:AT1G51350:ARM repeat superfamily protein | 1 | Chr02:47908136–47915999 (-) | 9.615e-11 | |
| Glyma.03G035400 | hypothetical protein | AT3G42630:AT3G42630:Pentatricopeptide repeat (PPR) superfamily protein | 1 | Chr03:4282985–4285957 (-) | 5.072e-11 | |
| Glyma.03G035500 | hypothetical protein | NA | 1 | Chr03:4289118–4294184 (+) | 2.772e-11 | |
| Glyma.04G082800 | hypothetical protein | NA | 1 | Chr04:6977997–6983005 (-) | 2.351e-12 | |
| Glyma.04G084200 | hypothetical protein | AT2G25830:AT2G25830:YebC-like protein | 1 | Chr04:7137351–7146570 (-) | 5.528e-18 | |
| Glyma.04G084300 | hypothetical protein | AT2G25800:AT2G25800:elongation factor Ts (DUF810) | 1 | Chr04:7153009–7158438 (+) | 3.197e-15 | |
| Glyma.04G086600 | hypothetical protein | NA | 1 | Chr04:7374806–7380808 (+) | 5.023e-12 | |
| Glyma.04G112200 | hypothetical protein | AT5G51750:SBT1.3:subtilase 1.3 | 1 | Chr04:12562882–12565006 (+) | 6.699e-12 | |
| Glyma.04G190200 | hypothetical protein | AT3G48330:PIMT1:protein-l-isoaspartate methyltransferase 1 | 1 | Chr04:46086785–46089618 (-) | 5.505e-12 | |
| Glyma.04G237000 | hypothetical protein | AT1G31910:AT1G31910:GHMP kinase family protein | 1 | Chr04:50558708–50569783 (+) | 5.515e-11 | |
| Glyma.04G237200 | hypothetical protein | AT3G52210:AT3G52210:S-adenosyl-L-methionine-dependent methyltransferases superfamily protein | 1 | Chr04:50576216–50582296 (-) | 5.515e-11 | |
| Glyma.04G237500 | hypothetical protein | AT5G15940:AT5G15940:NAD(P)-binding Rossmann-fold superfamily protein__AT5G04070:AT5G04070:NAD(P)-binding Rossmann-fold … | 1 | Chr04:50604264–50609423 (+) | 5.515e-11 | |
| Glyma.05G124700 | hypothetical protein | NA | 1 | Chr05:31807311–31817648 (+) | 2.69e-11 | |
| Glyma.05G127200 | hypothetical protein | AT1G29790:AT1G29790:S-adenosyl-L-methionine-dependent methyltransferases superfamily protein | 1 | Chr05:32014213–32017922 (-) | 6.726e-12 | |
| Glyma.05G127300 | hypothetical protein | AT1G64520:RPN12a:regulatory particle non-ATPase 12A__AT5G42040:RPN12b:regulatory particle non-ATPase 12B | 1 | Chr05:32021521–32025767 (-) | 7.514e-12 | |
| Glyma.05G127400 | hypothetical protein | AT1G29850:AT1G29850:double-stranded DNA-binding family protein | 1 | Chr05:32030115–32033716 (+) | 7.514e-12 | |
| Glyma.05G127500 | hypothetical protein | NA | 1 | Chr05:32041345–32049554 (+) | 1.884e-13 | |
| Glyma.05G127800 | hypothetical protein | AT4G18240:SS4:starch synthase 4 | 1 | Chr05:32125404–32138244 (+) | 1.895e-13 | |
| Glyma.05G127900 | SAD1 | AT5G48870:SAD1:Small nuclear ribonucleoprotein family protein | 1 | Chr05:32139620–32141770 (-) | 1.895e-13 | |
| Glyma.05G128200 | hypothetical protein | AT5G46330:FLS2:Leucine-rich receptor-like protein kinase family protein | 1 | Chr05:32158034–32162343 (-) | 1.895e-13 | |
| Glyma.05G191600 | hypothetical protein | AT2G13680:CALS5:callose synthase 5 | 1 | Chr05:37711639–37726572 (-) | 6.215e-11 | |
| Glyma.05G224700 | hypothetical protein | NA | 1 | Chr05:40351005–40361888 (+) | 1.406e-11 | |
| Glyma.05G226000 | hypothetical protein | AT5G19730:AT5G19730:Pectin lyase-like superfamily protein | 1 | Chr05:40458098–40461736 (+) | 2.282e-11 | |
| Glyma.05G236400 | hypothetical protein | AT1G23210:GH9B6:glycosyl hydrolase 9B6__AT1G70710:GH9B1:glycosyl hydrolase 9B1 | 1 | Chr05:41274513–41279615 (-) | 5.266e-17 | |
| Glyma.05G236700 | hypothetical protein | AT4G33760:AT4G33760:tRNA synthetase class II (D, K and N) family protein | 1 | Chr05:41301540–41310727 (+) | 4.509e-20 | |
| Glyma.05G237800 | hypothetical protein | AT1G48790:AMSH1:associated molecule with the SH3 domain of STAM 1 | 1 | Chr05:41406807–41413022 (-) | 3.055e-12 | |
| Glyma.06G125200 | hypothetical protein | AT4G27940:MTM1:manganese tracking factor for mitochondrial SOD2 | 1 | Chr06:10209787–10215982 (+) | 3.763e-14 | |
| Glyma.06G125300 | hypothetical protein | AT5G24105:AGP41:arabinogalactan protein 41 | 1 | Chr06:10216506–10218901 (-) | 3.763e-14 | |
| Glyma.06G291800 | hypothetical protein | NA | 1 | Chr06:48044194–48047197 (-) | 1.61e-11 | |
| Glyma.06G292200 | hypothetical protein | AT5G44290:AT5G44290:Protein kinase superfamily protein | 1 | Chr06:48100578–48107433 (-) | 1.61e-11 | |
| Glyma.06G313500 | hypothetical protein | NA | 1 | Chr06:50191600–50203098 (-) | 3.397e-11 | |
| Glyma.07G015700 | hypothetical protein | AT1G79750:NADP-ME4:NADP-malic enzyme 4 | 1 | Chr07:1244977–1251198 (-) | 9.444e-12 | |
| Glyma.07G017600 | hypothetical protein | NA | 1 | Chr07:1415837–1422680 (+) | 2.108e-11 | |
| Glyma.08G016700 | hypothetical protein | AT1G63840:AT1G63840:RING/U-box superfamily protein | 1 | Chr08:1330226–1331366 (-) | 1.752e-12 | |
| Glyma.09G080200 | hypothetical protein | NA | 1 | Chr09:9256042–9263239 (-) | 8.467e-12 | |
| Glyma.09G082000 | hypothetical protein | NA | 1 | Chr09:9638564–9650178 (+) | 1.524e-14 | |
| Glyma.09G084300 | hypothetical protein | AT2G34680:AIR9:Outer arm dynein light chain 1 protein | 1 | Chr09:10129602–10197250 (-) | 1.631e-13 | |
| Glyma.10G028500 | hypothetical protein | NA | 1 | Chr10:2476846–2478953 (+) | 1.105e-12 | |
| Glyma.10G028700 | hypothetical protein | AT1G03090:MCCA:methylcrotonyl-CoA carboxylase alpha chain | 1 | Chr10:2485817–2497071 (-) | 1.105e-12 | |
| Glyma.12G049300 | hypothetical protein | NA | 1 | Chr12:3538428–3539170 (-) | 7.441e-11 | |
| Glyma.12G108600 | hypothetical protein | NA | 1 | Chr12:9994609–9997302 (-) | 5.141e-15 | |
| Glyma.12G109500 | hypothetical protein | AT4G03415:PP2C52:Protein phosphatase 2C family protein | 1 | Chr12:10308026–10314332 (-) | 5.141e-15 | |
| Glyma.12G114500 | hypothetical protein | AT4G22930:PYR4:pyrimidin 4 | 1 | Chr12:11396572–11400825 (-) | 1.594e-15 | |
| Glyma.12G114900 | hypothetical protein | NA | 1 | Chr12:11457987–11462951 (-) | 1.594e-15 | |
| Glyma.12G183400 | hypothetical protein | NA | 1 | Chr12:34427496–34440319 (-) | 5.241e-11 | |
| Glyma.12G203600 | EXPB8 | AT2G20750:EXPB1:expansin B1 | 1 | Chr12:36390283–36394245 (-) | 1.374e-11 | |
| Glyma.12G203700 | hypothetical protein | AT4G28260:AT4G28260:acyl-UDP-N-acetylglucosamine O-acyltransferase | 1 | Chr12:36406747–36413696 (+) | 2.796e-11 | |
| Glyma.12G204000 | hypothetical protein | AT1G03687:AT1G03687:DTW domain-containing protein | 1 | Chr12:36428558–36432835 (+) | 1.982e-15 | |
| Glyma.12G204600 | hypothetical protein | AT4G28310:AT4G28310:microtubule-associated protein | 1 | Chr12:36504234–36505245 (+) | 1.043e-12 | |
| Glyma.13G062700 | hypothetical protein | AT3G01180:SS2:starch synthase 2 | 1 | Chr13:16045152–16059846 (-) | 3.76e-11 | |
| Glyma.13G062800 | hypothetical protein | AT5G48600:SMC3:structural maintenance of chromosome 3 | 1 | Chr13:16067222–16078901 (-) | 3.76e-11 | |
| Glyma.13G135300 | hypothetical protein | NA | 1 | Chr13:24770681–24773826 (+) | 5.812e-14 | |
| Glyma.13G135400 | hypothetical protein | AT5G12130:PDE149:integral membrane TerC family protein | 1 | Chr13:24786242–24791938 (+) | 5.812e-14 | |
| Glyma.13G135500 | hypothetical protein | AT5G02780:GSTL1:glutathione transferase lambda 1 | 1 | Chr13:24798567–24801567 (+) | 1.658e-12 | |
| Glyma.13G203200 | hypothetical protein | AT3G52105:AT3G52105:DIS3-exonuclease-like protein | 1 | Chr13:31720004–31725252 (+) | 8.589e-12 | |
| Glyma.13G203300 | hypothetical protein | AT3G63530:BB:RING/U-box superfamily protein | 1 | Chr13:31727841–31735910 (-) | 8.589e-12 | |
| Glyma.13G203700 | hypothetical protein | NA | 1 | Chr13:31780982–31784218 (+) | 8.589e-12 | |
| Glyma.13G203900 | hypothetical protein | NA | 1 | Chr13:31793697–31796601 (-) | 6.553e-13 | |
| Glyma.14G066800 | hypothetical protein | NA | 1 | Chr14:5511222–5513114 (+) | 7.057e-11 | |
| Glyma.16G050500 | AFB3B | auxin signaling F-box 3 protein | AT3G26810:AFB2:auxin signaling F-box 2 | 1 | Chr16:4853237–4856710 (+) | 1.108e-12 |
| Glyma.16G050900 | COL16 | NA | 1 | Chr16:4874634–4878624 (+) | 2.028e-11 | |
| Glyma.16G117400 | hypothetical protein | NA | 1 | Chr16:26234552–26238233 (-) | 4.303e-11 | |
| Glyma.16G119300 | hypothetical protein | NA | 1 | Chr16:26643902–26644416 (+) | 5.321e-12 | |
| Glyma.16G119400 | hypothetical protein | NA | 1 | Chr16:26684278–26687087 (+) | 2.124e-11 | |
| Glyma.16G121500 | hypothetical protein | NA | 1 | Chr16:27007186–27010856 (+) | 3.125e-12 | |
| Glyma.16G179800 | hypothetical protein | AT5G52520:OVA6:Class II aaRS and biotin synthetases superfamily protein | 1 | Chr16:34022480–34027055 (-) | 3.051e-12 | |
| Glyma.16G182600 | hypothetical protein | AT5G52400:CYP715A1:cytochrome P450, family 715, subfamily A, polypeptide 1 | 1 | Chr16:34364037–34367765 (-) | 8.004e-11 | |
| Glyma.16G209300 | hypothetical protein | NA | 1 | Chr16:36856833–36863994 (-) | 1.581e-14 | |
| Glyma.16G210300 | hypothetical protein | AT1G73340:AT1G73340:Cytochrome P450 superfamily protein | 1 | Chr16:36943073–36948828 (+) | 2.506e-11 | |
| Glyma.16G210400 | hypothetical protein | AT1G73350:AT1G73350:ankyrin repeat protein | 1 | Chr16:36949685–36953467 (+) | 2.506e-11 | |
| Glyma.17G215500 | KNAT5 | NA | 1 | Chr17:36212363–36217688 (-) | 5.273e-11 | |
| Glyma.18G299100 | hypothetical protein | AT5G13420:TRA2:Aldolase-type TIM barrel family protein | 1 | Chr18:57674222–57678396 (+) | 1.768e-12 | |
| Glyma.19G005200 | hypothetical protein | AT3G27640:AT3G27640:Transducin/WD40 repeat-like superfamily protein | 1 | Chr19:472201–476152 (-) | 5.594e-12 | |
| Glyma.19G009400 | hypothetical protein | AT5G40270:AT5G40270:HD domain-containing metal-dependent phosphohydrolase family protein | 1 | Chr19:885045–893253 (+) | 4.424e-11 | |
| Glyma.19G011600 | hypothetical protein | NA | 1 | Chr19:1111789–1116419 (+) | 8.251e-12 | |
| Glyma.19G011800 | hypothetical protein | AT3G01420:DOX1:Peroxidase superfamily protein | 1 | Chr19:1134716–1143232 (+) | 4.687e-11 | |
| Glyma.19G012100 | hypothetical protein | AT3G28150:TBL22:TRICHOME BIREFRINGENCE-LIKE 22 | 1 | Chr19:1155711–1161298 (-) | 2.105e-13 | |
| Glyma.19G012300 | hypothetical protein | NA | 1 | Chr19:1165111–1173031 (-) | 2.105e-13 | |
| Glyma.19G128200 | hypothetical protein | NA | 1 | Chr19:38739769–38743404 (+) | 9.654e-11 | |
| Glyma.20G019500 | hypothetical protein | AT1G21065:AT1G21065:secondary thiamine-phosphate synthase enzyme | 1 | Chr20:2039210–2040459 (+) | 2.696e-13 | |
| Glyma.20G019700 | hypothetical protein | NA | 1 | Chr20:2047020–2050862 (-) | 2.782e-12 | |
| Glyma.20G019800 | hypothetical protein | AT1G49350:AT1G49350:pfkB-like carbohydrate kinase family protein | 1 | Chr20:2051817–2057262 (+) | 1.061e-12 | |
| Glyma.20G107200 | hypothetical protein | AT4G38540:AT4G38540:FAD/NAD(P)-binding oxidoreductase family protein | 1 | Chr20:34984922–34988496 (+) | 1.951e-11 |