P25410
Metabolite ID
P25410
Deionized mass
407.1560 Da
Average m/z
408.1636
Average RT
14.6844
Adduct
[M+H]+
Association scope
Overlapping genes only
Associated genes
16
GWAS result file
Available
Candidate annotations
Search compound candidates by deionized mass and tolerance. Follow compound IDs for database records, or use name searches to explore chemistry and soybean literature. About candidate annotations
GWAS Evidence
Dataset: indexed GWAS records.
SNP counts, plot highlights, gene associations and downloads use P < 10⁻¹⁰. Changing the threshold updates this page together.
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This Q–Q plot describes the indexed records. For downsampled files, it does not represent the distribution across all tested variants. Data coverage
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Associated genes
16 genes linked to SNP records with P < 10⁻¹⁰ in the selected scope. Supporting SNP records are counted per feature–gene pair.
| Gene ID | Alias | Description | Arabidopsis ortholog | Supporting SNP records | Gene interval (1-based) | Minimum P |
|---|---|---|---|---|---|---|
| Glyma.08G303400 | hypothetical protein | NA | 2 | Chr08:42139097–42147365 (+) | 6.23e-11 | |
| Glyma.18G243300 | hypothetical protein | AT3G24090:GFAT:putative glucosamine-fructose-6-phosphate aminotransferase | 2 | Chr18:53151480–53157909 (+) | 1.197e-11 | |
| Glyma.01G034700 | hypothetical protein | NA | 1 | Chr01:3599923–3602578 (-) | 3.05e-11 | |
| Glyma.05G127500 | hypothetical protein | NA | 1 | Chr05:32041345–32049554 (+) | 2.753e-11 | |
| Glyma.05G127800 | hypothetical protein | AT4G18240:SS4:starch synthase 4 | 1 | Chr05:32125404–32138244 (+) | 7.602e-11 | |
| Glyma.05G127900 | SAD1 | AT5G48870:SAD1:Small nuclear ribonucleoprotein family protein | 1 | Chr05:32139620–32141770 (-) | 7.602e-11 | |
| Glyma.05G128200 | hypothetical protein | AT5G46330:FLS2:Leucine-rich receptor-like protein kinase family protein | 1 | Chr05:32158034–32162343 (-) | 7.602e-11 | |
| Glyma.09G080200 | hypothetical protein | NA | 1 | Chr09:9256042–9263239 (-) | 5.285e-11 | |
| Glyma.09G082000 | hypothetical protein | NA | 1 | Chr09:9638564–9650178 (+) | 7.357e-11 | |
| Glyma.11G058500 | hypothetical protein | AT4G37190:AT4G37190:plasma membrane, autoregulation-binding site, misato segment II, myosin-like, tubulin/FtsZ protein | 1 | Chr11:4417029–4423791 (-) | 1.761e-12 | |
| Glyma.12G108600 | hypothetical protein | NA | 1 | Chr12:9994609–9997302 (-) | 6.709e-11 | |
| Glyma.12G109500 | hypothetical protein | AT4G03415:PP2C52:Protein phosphatase 2C family protein | 1 | Chr12:10308026–10314332 (-) | 6.709e-11 | |
| Glyma.16G159100 | hypothetical protein | NA | 1 | Chr16:31889835–31894662 (+) | 4.874e-11 | |
| Glyma.18G243800 | Tic20-II | AT2G47840:Tic20-II:putative conserved protein ycf60 | 1 | Chr18:53176043–53177130 (+) | 1.197e-11 | |
| Glyma.18G244400 | hypothetical protein | AT3G03330:AT3G03330:NAD(P)-binding Rossmann-fold superfamily protein | 1 | Chr18:53211659–53216296 (+) | 2.074e-11 | |
| Glyma.19G218100 | hypothetical protein | AT1G02390:GPAT2:glycerol-3-phosphate acyltransferase 2 | 1 | Chr19:47082133–47085750 (+) | 6.961e-12 |