Overview Annotation GWAS Evidence Associated genes

P24506

Metabolite ID
P24506
Deionized mass
261.0304 Da
Average m/z
262.0386
Average RT
14.4340
Adduct
[M+H]+
Association scope
Overlapping genes only
Associated genes
9
GWAS result file
Available

Candidate annotations

Search compound candidates by deionized mass and tolerance. Follow compound IDs for database records, or use name searches to explore chemistry and soybean literature. About candidate annotations

GWAS Evidence

Dataset: indexed GWAS records.

Settings

SNP counts, plot highlights, gene associations and downloads use P < 10⁻¹⁰. Changing the threshold updates this page together.

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This Q–Q plot describes the indexed records. For downsampled files, it does not represent the distribution across all tested variants. Data coverage

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Associated genes

9 genes linked to SNP records with P < 10⁻¹⁰ in the selected scope. Supporting SNP records are counted per feature–gene pair.

Gene ID Alias Description Arabidopsis ortholog Supporting SNP recordsGene interval (1-based)Minimum P
Glyma.15G019600 hypothetical protein AT5G48120:MET18:ARM repeat superfamily protein 2Chr15:1524472–1536978 (-)3.69e-11
Glyma.02G126300 hypothetical protein NA 1Chr02:12670653–12677305 (+)1.174e-11
Glyma.02G126400 hypothetical protein NA 1Chr02:12678071–12683492 (+)1.174e-11
Glyma.02G126800 hypothetical protein AT1G13580:LAG13:LAG1 longevity assurance-like protein__AT3G25540:LAG1:TRAM, LAG1 and CLN8 (TLC) lipid-sensing domain co… 1Chr02:12771578–12777488 (+)1.174e-11
Glyma.02G127400 hypothetical protein AT1G26190:AT1G26190:Phosphoribulokinase / Uridine kinase family 1Chr02:12849745–12869066 (+)1.174e-11
Glyma.02G127600 hypothetical protein NA 1Chr02:12976382–12983547 (+)1.174e-11
Glyma.09G080200 hypothetical protein NA 1Chr09:9256042–9263239 (-)5.541e-11
Glyma.11G090300 hypothetical protein AT4G19190:AT4G19190:zinc knuckle (CCHC-type) family protein 1Chr11:6849007–6855564 (+)3.215e-11
Glyma.15G020300 hypothetical protein AT1G51950:IAA18:indole-3-acetic acid inducible 18__AT3G16500:PAP1:phytochrome-associated protein 1 1Chr15:1573643–1577917 (+)6.14e-11