Overview Annotation GWAS Evidence Associated genes

P24296

Metabolite ID
P24296
Deionized mass
533.2359 Da
Average m/z
534.2438
Average RT
14.3778
Adduct
[M+H]+
Association scope
Overlapping genes only
Associated genes
6
GWAS result file
Available

Candidate annotations

Search compound candidates by deionized mass and tolerance. Follow compound IDs for database records, or use name searches to explore chemistry and soybean literature. About candidate annotations

GWAS Evidence

Dataset: indexed GWAS records.

Settings

SNP counts, plot highlights, gene associations and downloads use P < 10⁻¹⁰. Changing the threshold updates this page together.

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This Q–Q plot describes the indexed records. For downsampled files, it does not represent the distribution across all tested variants. Data coverage

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Associated genes

6 genes linked to SNP records with P < 10⁻¹⁰ in the selected scope. Supporting SNP records are counted per feature–gene pair.

Gene ID Alias Description Arabidopsis ortholog Supporting SNP recordsGene interval (1-based)Minimum P
Glyma.09G210000 hypothetical protein AT5G45620:AT5G45620:Proteasome component (PCI) domain protein 2Chr09:43422744–43428344 (-)2.017e-11
Glyma.03G023000 hypothetical protein AT4G00220:JLO:Lateral organ boundaries (LOB) domain family protein 1Chr03:2423540–2428634 (-)9.644e-11
Glyma.03G035600 hypothetical protein NA 1Chr03:4295128–4296444 (-)4.506e-11
Glyma.05G236400 hypothetical protein AT1G23210:GH9B6:glycosyl hydrolase 9B6__AT1G70710:GH9B1:glycosyl hydrolase 9B1 1Chr05:41274513–41279615 (-)2.274e-12
Glyma.09G209800 hypothetical protein NA 1Chr09:43411309–43411773 (+)9.927e-11
Glyma.12G095500 hypothetical protein AT3G44150:AT3G44150:Expp1 protein 1Chr12:8023570–8027770 (-)5.975e-13