P24008
Metabolite ID
P24008
Deionized mass
669.2601 Da
Average m/z
670.2690
Average RT
14.2914
Adduct
[M+H]+
Association scope
Overlapping genes only
Associated genes
65
GWAS result file
Available
Candidate annotations
Search compound candidates by deionized mass and tolerance. Follow compound IDs for database records, or use name searches to explore chemistry and soybean literature. About candidate annotations
GWAS Evidence
Dataset: indexed GWAS records.
SNP counts, plot highlights, gene associations and downloads use P < 10⁻¹⁰. Changing the threshold updates this page together.
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This Q–Q plot describes the indexed records. For downsampled files, it does not represent the distribution across all tested variants. Data coverage
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Associated genes
65 genes linked to SNP records with P < 10⁻¹⁰ in the selected scope. Supporting SNP records are counted per feature–gene pair.
| Gene ID | Alias | Description | Arabidopsis ortholog | Supporting SNP records | Gene interval (1-based) | Minimum P |
|---|---|---|---|---|---|---|
| Glyma.01G169700 | hypothetical protein | AT4G36410:UBC17:ubiquitin-conjugating enzyme 17 | 1 | Chr01:50715084–50719427 (-) | 6.14e-13 | |
| Glyma.01G169800 | hypothetical protein | AT4G36400:D2HGDH:FAD-linked oxidases family protein | 1 | Chr01:50726088–50733347 (-) | 6.14e-13 | |
| Glyma.02G115900 | hypothetical protein | AT1G26480:GRF12:ral regulatory factor 12 | 1 | Chr02:11280858–11285984 (+) | 6.986e-13 | |
| Glyma.02G133800 | hypothetical protein | AT1G49660:CXE5:carboxyesterase 5 | 1 | Chr02:13850366–13851962 (-) | 3.216e-11 | |
| Glyma.03G022100 | hypothetical protein | AT4G32430:AT4G32430:Pentatricopeptide repeat (PPR) superfamily protein | 1 | Chr03:2301675–2307263 (+) | 3.476e-11 | |
| Glyma.04G084200 | hypothetical protein | AT2G25830:AT2G25830:YebC-like protein | 1 | Chr04:7137351–7146570 (-) | 5.895e-11 | |
| Glyma.04G086600 | hypothetical protein | NA | 1 | Chr04:7374806–7380808 (+) | 5.319e-11 | |
| Glyma.05G124700 | hypothetical protein | NA | 1 | Chr05:31807311–31817648 (+) | 3.713e-12 | |
| Glyma.05G127200 | hypothetical protein | AT1G29790:AT1G29790:S-adenosyl-L-methionine-dependent methyltransferases superfamily protein | 1 | Chr05:32014213–32017922 (-) | 3.526e-12 | |
| Glyma.05G127300 | hypothetical protein | AT1G64520:RPN12a:regulatory particle non-ATPase 12A__AT5G42040:RPN12b:regulatory particle non-ATPase 12B | 1 | Chr05:32021521–32025767 (-) | 6.948e-12 | |
| Glyma.05G127400 | hypothetical protein | AT1G29850:AT1G29850:double-stranded DNA-binding family protein | 1 | Chr05:32030115–32033716 (+) | 6.948e-12 | |
| Glyma.05G127500 | hypothetical protein | NA | 1 | Chr05:32041345–32049554 (+) | 1.379e-12 | |
| Glyma.05G127800 | hypothetical protein | AT4G18240:SS4:starch synthase 4 | 1 | Chr05:32125404–32138244 (+) | 3.32e-12 | |
| Glyma.05G127900 | SAD1 | AT5G48870:SAD1:Small nuclear ribonucleoprotein family protein | 1 | Chr05:32139620–32141770 (-) | 3.32e-12 | |
| Glyma.05G128200 | hypothetical protein | AT5G46330:FLS2:Leucine-rich receptor-like protein kinase family protein | 1 | Chr05:32158034–32162343 (-) | 3.32e-12 | |
| Glyma.05G236400 | hypothetical protein | AT1G23210:GH9B6:glycosyl hydrolase 9B6__AT1G70710:GH9B1:glycosyl hydrolase 9B1 | 1 | Chr05:41274513–41279615 (-) | 4.596e-11 | |
| Glyma.05G236700 | hypothetical protein | AT4G33760:AT4G33760:tRNA synthetase class II (D, K and N) family protein | 1 | Chr05:41301540–41310727 (+) | 6.321e-14 | |
| Glyma.07G068700 | hypothetical protein | AT2G46060:AT2G46060:transmembrane protein-like protein | 1 | Chr07:6200187–6208590 (+) | 8.999e-11 | |
| Glyma.07G068800 | hypothetical protein | NA | 1 | Chr07:6211775–6221107 (-) | 8.999e-11 | |
| Glyma.09G080200 | hypothetical protein | NA | 1 | Chr09:9256042–9263239 (-) | 2.784e-11 | |
| Glyma.09G082000 | hypothetical protein | NA | 1 | Chr09:9638564–9650178 (+) | 2.689e-14 | |
| Glyma.09G084300 | hypothetical protein | AT2G34680:AIR9:Outer arm dynein light chain 1 protein | 1 | Chr09:10129602–10197250 (-) | 3.054e-13 | |
| Glyma.10G081200 | hypothetical protein | NA | 1 | Chr10:9600771–9603988 (-) | 8.662e-11 | |
| Glyma.10G081700 | hypothetical protein | NA | 1 | Chr10:9752508–9758422 (+) | 2.462e-12 | |
| Glyma.11G049700 | hypothetical protein | NA | 1 | Chr11:3731308–3734534 (+) | 2.759e-11 | |
| Glyma.11G050300 | hypothetical protein | AT2G23093:AT2G23093:Major facilitator superfamily protein | 1 | Chr11:3765453–3771565 (+) | 8.08e-11 | |
| Glyma.11G050500 | hypothetical protein | AT5G67370:CGLD27:DUF1230 family protein (DUF1230) | 1 | Chr11:3778152–3782174 (+) | 8.08e-11 | |
| Glyma.11G050600 | hypothetical protein | NA | 1 | Chr11:3779988–3786583 (-) | 8.08e-11 | |
| Glyma.11G051600 | hypothetical protein | NA | 1 | Chr11:3857225–3859564 (-) | 8.08e-11 | |
| Glyma.12G108600 | hypothetical protein | NA | 1 | Chr12:9994609–9997302 (-) | 1.55e-14 | |
| Glyma.12G109500 | hypothetical protein | AT4G03415:PP2C52:Protein phosphatase 2C family protein | 1 | Chr12:10308026–10314332 (-) | 1.55e-14 | |
| Glyma.12G114500 | hypothetical protein | AT4G22930:PYR4:pyrimidin 4 | 1 | Chr12:11396572–11400825 (-) | 1.742e-11 | |
| Glyma.12G114900 | hypothetical protein | NA | 1 | Chr12:11457987–11462951 (-) | 1.742e-11 | |
| Glyma.12G202200 | hypothetical protein | AT2G20860:LIP1:lipoic acid synthase 1 | 1 | Chr12:36267599–36271584 (+) | 3.319e-13 | |
| Glyma.12G202300 | hypothetical protein | NA | 1 | Chr12:36275438–36276838 (+) | 3.319e-13 | |
| Glyma.12G202400 | hypothetical protein | AT4G03415:PP2C52:Protein phosphatase 2C family protein | 1 | Chr12:36289704–36295084 (-) | 1.598e-11 | |
| Glyma.12G203600 | EXPB8 | AT2G20750:EXPB1:expansin B1 | 1 | Chr12:36390283–36394245 (-) | 1.927e-11 | |
| Glyma.12G204000 | hypothetical protein | AT1G03687:AT1G03687:DTW domain-containing protein | 1 | Chr12:36428558–36432835 (+) | 7.637e-12 | |
| Glyma.12G204400 | hypothetical protein | AT4G03560:TPC1:two-pore channel 1 | 1 | Chr12:36473422–36498915 (+) | 7.637e-12 | |
| Glyma.13G203200 | hypothetical protein | AT3G52105:AT3G52105:DIS3-exonuclease-like protein | 1 | Chr13:31720004–31725252 (+) | 9.465e-11 | |
| Glyma.13G203300 | hypothetical protein | AT3G63530:BB:RING/U-box superfamily protein | 1 | Chr13:31727841–31735910 (-) | 9.465e-11 | |
| Glyma.13G203700 | hypothetical protein | NA | 1 | Chr13:31780982–31784218 (+) | 9.465e-11 | |
| Glyma.13G203900 | hypothetical protein | NA | 1 | Chr13:31793697–31796601 (-) | 2.045e-11 | |
| Glyma.15G124000 | hypothetical protein | NA | 1 | Chr15:9845097–9849312 (-) | 9.377e-12 | |
| Glyma.16G050500 | AFB3B | auxin signaling F-box 3 protein | AT3G26810:AFB2:auxin signaling F-box 2 | 1 | Chr16:4853237–4856710 (+) | 1.594e-12 |
| Glyma.16G050900 | COL16 | NA | 1 | Chr16:4874634–4878624 (+) | 4.126e-11 | |
| Glyma.16G118100 | hypothetical protein | AT2G17570:cPT1:Undecaprenyl pyrophosphate synthetase family protein | 1 | Chr16:26324650–26336836 (+) | 2.9e-11 | |
| Glyma.16G119300 | hypothetical protein | NA | 1 | Chr16:26643902–26644416 (+) | 3.12e-11 | |
| Glyma.16G121500 | hypothetical protein | NA | 1 | Chr16:27007186–27010856 (+) | 2.916e-11 | |
| Glyma.16G145100 | hypothetical protein | NA | 1 | Chr16:30578388–30581421 (-) | 6.365e-11 | |
| Glyma.16G145600 | hypothetical protein | AT1G11310:MLO2:Seven transmembrane MLO family protein__AT2G39200:MLO12:Seven transmembrane MLO family protein__AT1G6156… | 1 | Chr16:30652378–30659548 (+) | 6.365e-11 | |
| Glyma.16G196400 | hypothetical protein | AT5G07270:XBAT33:uncharacterized protein | 1 | Chr16:35782198–35790495 (-) | 3.155e-11 | |
| Glyma.16G196800 | hypothetical protein | AT5G07250:RBL3:RHOMBOID-like protein 3 | 1 | Chr16:35831912–35835153 (+) | 4.924e-11 | |
| Glyma.16G196900 | hypothetical protein | NA | 1 | Chr16:35841279–35846894 (-) | 4.139e-12 | |
| Glyma.18G263900 | hypothetical protein | AT5G15410:DND1:Cyclic nucleotide-regulated ion channel family protein | 1 | Chr18:54907058–54912936 (-) | 8.25e-11 | |
| Glyma.18G266500 | hypothetical protein | NA | 1 | Chr18:55088284–55091427 (-) | 3.022e-11 | |
| Glyma.19G011600 | hypothetical protein | NA | 1 | Chr19:1111789–1116419 (+) | 3.923e-11 | |
| Glyma.19G011700 | hypothetical protein | AT3G01420:DOX1:Peroxidase superfamily protein | 1 | Chr19:1123637–1130946 (+) | 3.923e-11 | |
| Glyma.19G012100 | hypothetical protein | AT3G28150:TBL22:TRICHOME BIREFRINGENCE-LIKE 22 | 1 | Chr19:1155711–1161298 (-) | 3.942e-14 | |
| Glyma.19G012300 | hypothetical protein | NA | 1 | Chr19:1165111–1173031 (-) | 3.942e-14 | |
| Glyma.19G128200 | hypothetical protein | NA | 1 | Chr19:38739769–38743404 (+) | 1.382e-11 | |
| Glyma.20G013100 | hypothetical protein | NA | 1 | Chr20:1134080–1135710 (-) | 4.196e-12 | |
| Glyma.20G019500 | hypothetical protein | AT1G21065:AT1G21065:secondary thiamine-phosphate synthase enzyme | 1 | Chr20:2039210–2040459 (+) | 9.535e-13 | |
| Glyma.20G019700 | hypothetical protein | NA | 1 | Chr20:2047020–2050862 (-) | 1.214e-11 | |
| Glyma.20G019800 | hypothetical protein | AT1G49350:AT1G49350:pfkB-like carbohydrate kinase family protein | 1 | Chr20:2051817–2057262 (+) | 8.638e-16 |