Soybean mGWAS DBExplore The Genetic Basis Of Soybean Metabolism Glycine max
Overview Annotation GWAS Evidence Associated genes

P23739

Metabolite ID
P23739
Deionized mass
467.2227 Da
Average m/z
468.2311
Average RT
14.1956
Adduct
[M+H]+
Association scope
Overlapping genes only
Associated genes
56
GWAS result file
Available
Open in Soybean Metabolome Repository

Candidate annotations

Search compound candidates by deionized mass and tolerance. Follow compound IDs for database records, or use name searches to explore chemistry and soybean literature. About candidate annotations

GWAS Evidence

Dataset: indexed GWAS records.

Settings

SNP counts, plot highlights, gene associations and downloads use P < 10⁻¹⁰. Changing the threshold updates this page together.

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Associated genes

56 genes linked to SNP records with P < 10⁻¹⁰ in the selected scope. Supporting SNP records are counted per feature–gene pair.

Gene ID Alias Description Arabidopsis ortholog Supporting SNP recordsGene interval (1-based)Minimum P
Glyma.01G126800 hypothetical protein NA 2Chr01:43602195–43612710 (+)2.408e-11
Glyma.08G114700 hypothetical protein AT3G13600:AT3G13600:calmodulin-binding family protein 2Chr08:8768854–8772973 (-)5.826e-12
Glyma.19G029600 hypothetical protein NA 2Chr19:3681517–3690884 (-)2.328e-11
Glyma.01G040000 hypothetical protein NA 1Chr01:4336374–4338196 (+)1.888e-11
Glyma.01G045400 hypothetical protein NA 1Chr01:5140834–5144197 (-)4.238e-12
Glyma.01G121400 hypothetical protein AT5G01400:ESP4:HEAT repeat-containing protein 1Chr01:41808055–41828625 (-)4.88e-11
Glyma.01G123900 hypothetical protein AT3G51770:ETO1:tetratricopeptide repeat (TPR)-containing protein 1Chr01:42831758–42837350 (+)8.495e-13
Glyma.01G124100 hypothetical protein NA 1Chr01:42886229–42892204 (-)2.135e-12
Glyma.01G124800 hypothetical protein AT2G38320:TBL34:TRICHOME BIREFRINGENCE-LIKE 34 1Chr01:43072403–43076304 (+)2.518e-12
Glyma.01G125400 hypothetical protein NA 1Chr01:43394231–43404097 (-)2.518e-12
Glyma.01G125500 hypothetical protein NA 1Chr01:43398981–43401979 (+)2.518e-12
Glyma.01G126000 hypothetical protein AT5G01650:AT5G01650:Tautomerase/MIF superfamily protein 1Chr01:43477322–43480661 (-)2.518e-12
Glyma.01G126300 hypothetical protein NA 1Chr01:43513210–43516682 (-)2.518e-12
Glyma.01G126400 hypothetical protein NA 1Chr01:43526917–43529405 (-)2.518e-12
Glyma.01G126500 hypothetical protein NA 1Chr01:43543307–43549330 (-)2.518e-12
Glyma.01G126900 hypothetical protein NA 1Chr01:43632082–43635399 (+)2.408e-11
Glyma.03G021600 hypothetical protein AT2G45510:CYP704A2:cytochrome P450, family 704, subfamily A, polypeptide 2__AT2G44890:CYP704A1:cytochrome P450, family … 1Chr03:2240686–2246512 (-)3.218e-11
Glyma.03G202700 hypothetical protein AT5G16280:AT5G16280:Tetratricopeptide repeat (TPR)-like superfamily protein 1Chr03:41108071–41128352 (+)7.265e-11
Glyma.03G209700 hypothetical protein NA 1Chr03:41646792–41648527 (+)1.022e-13
Glyma.05G236400 hypothetical protein AT1G23210:GH9B6:glycosyl hydrolase 9B6__AT1G70710:GH9B1:glycosyl hydrolase 9B1 1Chr05:41274513–41279615 (-)9.981e-11
Glyma.05G236700 hypothetical protein AT4G33760:AT4G33760:tRNA synthetase class II (D, K and N) family protein 1Chr05:41301540–41310727 (+)3.479e-12
Glyma.06G126500 hypothetical protein AT5G04070:AT5G04070:NAD(P)-binding Rossmann-fold superfamily protein 1Chr06:10367536–10373426 (-)1.984e-14
Glyma.08G109000 SUB1 NA 1Chr08:8364770–8373803 (-)1.768e-12
Glyma.08G109400 CHS1 AT5G13930:TT4:Chalcone and stilbene synthase family protein 1Chr08:8391364–8394840 (+)1.398e-11
Glyma.08G110000 hypothetical protein AT3G23840:AT3G23840:HXXXD-type acyl-transferase family protein 1Chr08:8438346–8442806 (-)1.768e-12
Glyma.08G110200 hypothetical protein NA 1Chr08:8471393–8473156 (+)7.595e-12
Glyma.08G111700 hypothetical protein NA 1Chr08:8604527–8606424 (-)2.716e-11
Glyma.08G204800 hypothetical protein AT3G16140:PSAH-1:photosystem I subunit H-1 1Chr08:16601039–16602646 (+)4.546e-11
Glyma.09G082000 hypothetical protein NA 1Chr09:9638564–9650178 (+)1.782e-13
Glyma.09G084300 hypothetical protein AT2G34680:AIR9:Outer arm dynein light chain 1 protein 1Chr09:10129602–10197250 (-)1.569e-12
Glyma.13G135500 hypothetical protein AT5G02780:GSTL1:glutathione transferase lambda 1 1Chr13:24798567–24801567 (+)4.383e-11
Glyma.13G135700 hypothetical protein NA 1Chr13:24812720–24818735 (+)4.383e-11
Glyma.13G135800 hypothetical protein AT5G02800:CDL1:Protein kinase superfamily protein 1Chr13:24820151–24823999 (-)4.382e-11
Glyma.13G156000 hypothetical protein AT2G07560:HA6:H[+]-ATPase 6__AT3G42640:HA8:H[+]-ATPase 8 1Chr13:27104338–27109785 (+)9.286e-11
Glyma.14G066800 hypothetical protein NA 1Chr14:5511222–5513114 (+)1.32e-11
Glyma.14G067800 hypothetical protein AT3G12380:ARP5:actin-related protein 5 1Chr14:5675792–5680343 (+)1.937e-11
Glyma.14G068100 hypothetical protein AT3G12550:FDM3:XH/XS domain-containing protein 1Chr14:5701618–5711043 (-)1.98e-11
Glyma.14G068500 hypothetical protein NA 1Chr14:5741909–5745574 (-)3.895e-13
Glyma.14G069500 hypothetical protein AT5G37810:NIP4;1:NOD26-like intrinsic protein 4;1 1Chr14:5822246–5825628 (-)7.568e-12
Glyma.14G071600 hypothetical protein AT1G27620:AT1G27620:HXXXD-type acyl-transferase family protein 1Chr14:6016839–6019954 (+)6.196e-13
Glyma.14G071700 hypothetical protein AT1G19660:AT1G19660:Wound-responsive family protein__AT1G75380:BBD1:bifunctional nuclease in basal defense response 1 1Chr14:6037810–6041899 (+)9.051e-14
Glyma.14G071800 hypothetical protein NA 1Chr14:6040746–6041899 (-)9.051e-14
Glyma.14G075900 hypothetical protein NA 1Chr14:6362111–6364010 (-)6.506e-12
Glyma.14G213400 hypothetical protein NA 1Chr14:47844823–47847028 (+)2.365e-11
Glyma.16G114900 hypothetical protein NA 1Chr16:25456379–25485759 (+)2.415e-11
Glyma.16G115800 hypothetical protein NA 1Chr16:25719040–25728740 (-)5.548e-12
Glyma.16G121000 IQD20 AT3G51380:IQD20:IQ-domain 20 1Chr16:26909514–26910355 (+)2.838e-12
Glyma.16G140600 hypothetical protein NA 1Chr16:29836830–29839178 (+)2.362e-11
Glyma.16G189100 hypothetical protein AT1G05190:emb2394:Ribosomal protein L6 family 1Chr16:35170253–35173950 (-)7.586e-12
Glyma.16G198600 hypothetical protein AT5G52060:BAG1:BCL-2-associated athano 1 1Chr16:35958085–35960833 (+)1.028e-11
Glyma.17G064000 hypothetical protein AT2G18840:AT2G18840:Integral membrane Yip1 family protein__AT4G30260:AT4G30260:Integral membrane Yip1 family protein 1Chr17:4924830–4930155 (-)7.629e-11
Glyma.17G064200 hypothetical protein AT5G57500:AT5G57500:Galactosyltransferase family protein 1Chr17:4943412–4944357 (-)7.629e-11
Glyma.18G263900 hypothetical protein AT5G15410:DND1:Cyclic nucleotide-regulated ion channel family protein 1Chr18:54907058–54912936 (-)4.809e-11
Glyma.19G027700 hypothetical protein AT5G15440:EDL1:EID1-like 1 1Chr19:3471299–3475645 (+)9.394e-12
Glyma.20G107200 hypothetical protein AT4G38540:AT4G38540:FAD/NAD(P)-binding oxidoreductase family protein 1Chr20:34984922–34988496 (+)3.138e-11
Glyma.20G108900 hypothetical protein AT4G24175:AT4G24175:kinesin-like protein 1Chr20:35119868–35122488 (+)7.896e-11