Overview Annotation GWAS Evidence Associated genes

P23649

Metabolite ID
P23649
Deionized mass
273.0803 Da
Average m/z
274.0892
Average RT
14.1720
Adduct
[M+H]+
Association scope
Overlapping genes only
Associated genes
51
GWAS result file
Available

Candidate annotations

Search compound candidates by deionized mass and tolerance. Follow compound IDs for database records, or use name searches to explore chemistry and soybean literature. About candidate annotations

GWAS Evidence

Dataset: indexed GWAS records.

Settings

SNP counts, plot highlights, gene associations and downloads use P < 10⁻¹⁰. Changing the threshold updates this page together.

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This Q–Q plot describes the indexed records. For downsampled files, it does not represent the distribution across all tested variants. Data coverage

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Associated genes

51 genes linked to SNP records with P < 10⁻¹⁰ in the selected scope. Supporting SNP records are counted per feature–gene pair.

Gene ID Alias Description Arabidopsis ortholog Supporting SNP recordsGene interval (1-based)Minimum P
Glyma.13G134400 hypothetical protein AT2G37370:AT2G37370:centrosomal protein of 135 kDa-like protein 3Chr13:24677399–24693129 (-)3.341e-11
Glyma.06G315100 hypothetical protein AT5G04930:ALA1:aminophospholipid ATPase 1 2Chr06:50401945–50408153 (+)9.484e-14
Glyma.06G317100 hypothetical protein AT5G61520:AT5G61520:Major facilitator superfamily protein 2Chr06:50586679–50589765 (+)8.699e-13
Glyma.12G204400 hypothetical protein AT4G03560:TPC1:two-pore channel 1 2Chr12:36473422–36498915 (+)1.511e-19
Glyma.14G093100 hypothetical protein NA 2Chr14:8654730–8655892 (-)1.21e-13
Glyma.01G096700 hypothetical protein NA 1Chr01:31374967–31380201 (+)7.981e-11
Glyma.01G119600 SLE3 AT2G40170:GEA6:Stress induced protein 1Chr01:41172520–41174209 (-)9.242e-12
Glyma.01G120000 hypothetical protein NA 1Chr01:41270985–41274854 (+)1.753e-11
Glyma.01G121400 hypothetical protein AT5G01400:ESP4:HEAT repeat-containing protein 1Chr01:41808055–41828625 (-)2.048e-12
Glyma.01G123900 hypothetical protein AT3G51770:ETO1:tetratricopeptide repeat (TPR)-containing protein 1Chr01:42831758–42837350 (+)7.55e-11
Glyma.01G124100 hypothetical protein NA 1Chr01:42886229–42892204 (-)9.355e-13
Glyma.01G169700 hypothetical protein AT4G36410:UBC17:ubiquitin-conjugating enzyme 17 1Chr01:50715084–50719427 (-)4.481e-11
Glyma.01G169800 hypothetical protein AT4G36400:D2HGDH:FAD-linked oxidases family protein 1Chr01:50726088–50733347 (-)4.481e-11
Glyma.02G205300 hypothetical protein NA 1Chr02:39037472–39038396 (-)3.348e-11
Glyma.03G147400 hypothetical protein NA 1Chr03:36293698–36295294 (+)3.457e-12
Glyma.04G084200 hypothetical protein AT2G25830:AT2G25830:YebC-like protein 1Chr04:7137351–7146570 (-)4.49e-12
Glyma.04G084300 hypothetical protein AT2G25800:AT2G25800:elongation factor Ts (DUF810) 1Chr04:7153009–7158438 (+)1.874e-11
Glyma.05G127500 hypothetical protein NA 1Chr05:32041345–32049554 (+)5.798e-11
Glyma.05G236400 hypothetical protein AT1G23210:GH9B6:glycosyl hydrolase 9B6__AT1G70710:GH9B1:glycosyl hydrolase 9B1 1Chr05:41274513–41279615 (-)5.254e-15
Glyma.05G236700 hypothetical protein AT4G33760:AT4G33760:tRNA synthetase class II (D, K and N) family protein 1Chr05:41301540–41310727 (+)8.386e-19
Glyma.05G237800 hypothetical protein AT1G48790:AMSH1:associated molecule with the SH3 domain of STAM 1 1Chr05:41406807–41413022 (-)4.411e-14
Glyma.06G316500 hypothetical protein AT2G47420:DIM1A:Ribosomal RNA adenine dimethylase family protein 1Chr06:50531222–50538652 (-)2.44e-12
Glyma.08G204800 hypothetical protein AT3G16140:PSAH-1:photosystem I subunit H-1 1Chr08:16601039–16602646 (+)6.896e-11
Glyma.09G080200 hypothetical protein NA 1Chr09:9256042–9263239 (-)6.699e-12
Glyma.09G082000 hypothetical protein NA 1Chr09:9638564–9650178 (+)2.135e-15
Glyma.09G084300 hypothetical protein AT2G34680:AIR9:Outer arm dynein light chain 1 protein 1Chr09:10129602–10197250 (-)1.457e-18
Glyma.09G110000 hypothetical protein NA 1Chr09:21593730–21602127 (+)3.268e-11
Glyma.10G078700 hypothetical protein NA 1Chr10:8882318–8903950 (+)2.14e-12
Glyma.10G079100 hypothetical protein NA 1Chr10:8960669–8962364 (-)2.14e-12
Glyma.10G079800 hypothetical protein NA 1Chr10:9223520–9228511 (-)2.14e-12
Glyma.10G080000 hypothetical protein AT3G11660:NHL1:NDR1/HIN1-like 1__AT3G52470:AT3G52470:Late embryosis abundant (LEA) hydroxyproline-rich glycoprotein fam… 1Chr10:9258476–9260697 (-)2.14e-12
Glyma.10G081200 hypothetical protein NA 1Chr10:9600771–9603988 (-)9.763e-13
Glyma.10G081700 hypothetical protein NA 1Chr10:9752508–9758422 (+)5.09e-14
Glyma.10G274700 hypothetical protein AT1G68560:XYL1:alpha-xylosidase 1__AT3G45940:AT3G45940:Glycosyl hydrolases family 31 protein 1Chr10:49769554–49774168 (-)1.227e-12
Glyma.12G203700 hypothetical protein AT4G28260:AT4G28260:acyl-UDP-N-acetylglucosamine O-acyltransferase 1Chr12:36406747–36413696 (+)4.216e-11
Glyma.12G204000 hypothetical protein AT1G03687:AT1G03687:DTW domain-containing protein 1Chr12:36428558–36432835 (+)1.511e-19
Glyma.12G204600 hypothetical protein AT4G28310:AT4G28310:microtubule-associated protein 1Chr12:36504234–36505245 (+)1.661e-16
Glyma.13G134300 hypothetical protein NA 1Chr13:24664171–24665742 (-)3.341e-11
Glyma.13G134500 hypothetical protein AT3G09560:PAH1:Lipin family protein 1Chr13:24696109–24705068 (-)7.181e-11
Glyma.13G156000 hypothetical protein AT2G07560:HA6:H[+]-ATPase 6__AT3G42640:HA8:H[+]-ATPase 8 1Chr13:27104338–27109785 (+)1.092e-12
Glyma.13G201600 hypothetical protein NA 1Chr13:31521512–31522992 (+)2.299e-11
Glyma.13G203900 hypothetical protein NA 1Chr13:31793697–31796601 (-)1.021e-12
Glyma.13G238400 hypothetical protein AT3G46930:AT3G46930:Protein kinase superfamily protein__AT5G58950:AT5G58950:Protein kinase superfamily protein 1Chr13:34872388–34881743 (-)3.662e-11
Glyma.15G124500 MLO-like protein 13 AT4G24250:MLO13:Seven transmembrane MLO family protein 1Chr15:9888761–9894068 (-)6.96e-11
Glyma.16G118100 hypothetical protein AT2G17570:cPT1:Undecaprenyl pyrophosphate synthetase family protein 1Chr16:26324650–26336836 (+)9.031e-11
Glyma.16G119400 hypothetical protein NA 1Chr16:26684278–26687087 (+)4.425e-11
Glyma.16G199300 hypothetical protein AT4G25440:ZFWD1:zinc finger WD40 repeat protein 1 1Chr16:36062040–36068016 (-)6.858e-11
Glyma.16G199400 hypothetical protein NA 1Chr16:36071524–36075157 (+)6.858e-11
Glyma.17G215500 KNAT5 NA 1Chr17:36212363–36217688 (-)8.524e-11
Glyma.19G005200 hypothetical protein AT3G27640:AT3G27640:Transducin/WD40 repeat-like superfamily protein 1Chr19:472201–476152 (-)2.485e-12
Glyma.19G009400 hypothetical protein AT5G40270:AT5G40270:HD domain-containing metal-dependent phosphohydrolase family protein 1Chr19:885045–893253 (+)7.694e-11