Soybean mGWAS DBExplore The Genetic Basis Of Soybean Metabolism Glycine max
Overview Annotation GWAS Evidence Associated genes

P23607

Metabolite ID
P23607
Deionized mass
184.0633 Da
Average m/z
185.0704
Average RT
14.1646
Adduct
[M+H]+
Association scope
Overlapping genes only
Associated genes
102
GWAS result file
Available
Open in Soybean Metabolome Repository

Candidate annotations

Search compound candidates by deionized mass and tolerance. Follow compound IDs for database records, or use name searches to explore chemistry and soybean literature. About candidate annotations

GWAS Evidence

Dataset: indexed GWAS records.

Settings

SNP counts, plot highlights, gene associations and downloads use P < 10⁻¹⁰. Changing the threshold updates this page together.

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Associated genes

102 genes linked to SNP records with P < 10⁻¹⁰ in the selected scope. Supporting SNP records are counted per feature–gene pair.

Gene ID Alias Description Arabidopsis ortholog Supporting SNP recordsGene interval (1-based)Minimum P
Glyma.19G027000 hypothetical protein NA 4Chr19:3335896–3343744 (+)6.574e-15
Glyma.03G001500 B15-3-5 AT2G38600:AT2G38600:HAD superfamily, subfamily IIIB acid phosphatase 3Chr03:169480–172727 (+)2.434e-11
Glyma.17G218600 hypothetical protein NA 3Chr17:36975400–36982812 (-)1.342e-11
Glyma.08G117500 hypothetical protein AT4G18780:IRX1:cellulose synthase family protein 2Chr08:9065033–9071774 (-)1.009e-11
Glyma.08G122200 hypothetical protein NA 2Chr08:9416766–9429995 (-)1.281e-16
Glyma.08G122300 hypothetical protein AT1G29390:COR314-TM2:cold regulated 314 thylakoid membrane 2 2Chr08:9435391–9437279 (+)1.281e-16
Glyma.08G123500 hypothetical protein NA 2Chr08:9494946–9505931 (-)1.281e-16
Glyma.10G081700 hypothetical protein NA 2Chr10:9752508–9758422 (+)3.058e-14
Glyma.12G204400 hypothetical protein AT4G03560:TPC1:two-pore channel 1 2Chr12:36473422–36498915 (+)1.031e-12
Glyma.13G134400 hypothetical protein AT2G37370:AT2G37370:centrosomal protein of 135 kDa-like protein 2Chr13:24677399–24693129 (-)8.923e-12
Glyma.13G135700 hypothetical protein NA 2Chr13:24812720–24818735 (+)1.999e-13
Glyma.13G135800 hypothetical protein AT5G02800:CDL1:Protein kinase superfamily protein 2Chr13:24820151–24823999 (-)1.999e-13
Glyma.14G201600 hypothetical protein NA 2Chr14:46703283–46706500 (+)3.545e-12
Glyma.16G031600 hypothetical protein NA 2Chr16:2964569–2985013 (+)8.391e-12
Glyma.16G118100 hypothetical protein AT2G17570:cPT1:Undecaprenyl pyrophosphate synthetase family protein 2Chr16:26324650–26336836 (+)2.858e-13
Glyma.19G026600 hypothetical protein AT4G13700:PAP23:purple acid phosphatase 23 2Chr19:3303658–3312907 (-)6.574e-15
Glyma.19G029600 hypothetical protein NA 2Chr19:3681517–3690884 (-)4.889e-12
Glyma.02G133800 hypothetical protein AT1G49660:CXE5:carboxyesterase 5 1Chr02:13850366–13851962 (-)6.585e-13
Glyma.03G023000 hypothetical protein AT4G00220:JLO:Lateral organ boundaries (LOB) domain family protein 1Chr03:2423540–2428634 (-)1.362e-12
Glyma.03G177700 hypothetical protein NA 1Chr03:39046772–39051158 (+)3.645e-11
Glyma.04G112200 hypothetical protein AT5G51750:SBT1.3:subtilase 1.3 1Chr04:12562882–12565006 (+)8.263e-11
Glyma.05G149200 hypothetical protein NA 1Chr05:34347910–34353885 (-)6.775e-11
Glyma.05G149300 hypothetical protein AT2G03870:EMB2816:Small nuclear ribonucleoprotein family protein 1Chr05:34357418–34361032 (-)9.025e-12
Glyma.05G149900 hypothetical protein NA 1Chr05:34389242–34393621 (-)9.025e-12
Glyma.05G224700 hypothetical protein NA 1Chr05:40351005–40361888 (+)5.611e-13
Glyma.05G226000 hypothetical protein AT5G19730:AT5G19730:Pectin lyase-like superfamily protein 1Chr05:40458098–40461736 (+)1.401e-12
Glyma.05G236400 hypothetical protein AT1G23210:GH9B6:glycosyl hydrolase 9B6__AT1G70710:GH9B1:glycosyl hydrolase 9B1 1Chr05:41274513–41279615 (-)1.497e-11
Glyma.05G236700 hypothetical protein AT4G33760:AT4G33760:tRNA synthetase class II (D, K and N) family protein 1Chr05:41301540–41310727 (+)4.059e-13
Glyma.06G112300 hypothetical protein AT1G44780:AT1G44780:translation initiation factor__AT4G08310:AT4G08310:DNA ligase 1Chr06:9113982–9118848 (-)1.405e-12
Glyma.06G112600 hypothetical protein AT1G77620:AT1G77620:P-loop containing nucleoside triphosphate hydrolases superfamily protein 1Chr06:9134358–9144986 (+)1.405e-12
Glyma.06G112700 hypothetical protein AT1G44760:AT1G44760:Adenine nucleotide alpha hydrolases-like superfamily protein 1Chr06:9156973–9158659 (+)1.405e-12
Glyma.06G190300 hypothetical protein AT1G74730:AT1G74730:transmembrane protein, putative (DUF1118) 1Chr06:16709212–16710732 (-)1.154e-12
Glyma.08G114700 hypothetical protein AT3G13600:AT3G13600:calmodulin-binding family protein 1Chr08:8768854–8772973 (-)8.71e-11
Glyma.08G118400 hypothetical protein AT4G18810:AT4G18810:NAD(P)-binding Rossmann-fold superfamily protein 1Chr08:9147404–9153858 (-)1.009e-11
Glyma.08G119300 hypothetical protein AT1G29330:ERD2:ER lumen protein retaining receptor family protein 1Chr08:9198213–9201688 (-)2.62e-11
Glyma.08G122500 hypothetical protein NA 1Chr08:9441329–9445315 (-)1.281e-16
Glyma.08G122600 hypothetical protein NA 1Chr08:9445153–9450502 (+)8.952e-12
Glyma.08G122700 hypothetical protein AT1G29350:AT1G29350:RNA polymerase II degradation factor-like protein (DUF1296) 1Chr08:9452604–9458932 (+)1.281e-16
Glyma.08G211800 hypothetical protein NA 1Chr08:17104514–17105442 (-)4.571e-11
Glyma.09G016500 hypothetical protein NA 1Chr09:1274652–1276853 (-)2.075e-11
Glyma.09G016800 hypothetical protein NA 1Chr09:1300913–1311894 (+)7.376e-12
Glyma.09G018700 hypothetical protein NA 1Chr09:1470411–1472672 (-)3.728e-11
Glyma.09G249500 hypothetical protein NA 1Chr09:47056885–47062577 (+)7.191e-11
Glyma.09G282900 hypothetical protein AT2G29090:CYP707A2:cytochrome P450, family 707, subfamily A, polypeptide 2 1Chr09:49863377–49871270 (+)9.416e-12
Glyma.10G078700 hypothetical protein NA 1Chr10:8882318–8903950 (+)1.401e-12
Glyma.10G079100 hypothetical protein NA 1Chr10:8960669–8962364 (-)1.401e-12
Glyma.10G079700 hypothetical protein AT2G35980:YLS9:Late embryosis abundant (LEA) hydroxyproline-rich glycoprotein family 1Chr10:9218478–9219468 (-)6.45e-11
Glyma.10G079800 hypothetical protein NA 1Chr10:9223520–9228511 (-)1.401e-12
Glyma.10G080000 hypothetical protein AT3G11660:NHL1:NDR1/HIN1-like 1__AT3G52470:AT3G52470:Late embryosis abundant (LEA) hydroxyproline-rich glycoprotein fam… 1Chr10:9258476–9260697 (-)1.401e-12
Glyma.10G080400 hypothetical protein AT2G33990:iqd9:IQ-domain 9 1Chr10:9454616–9455485 (+)1.934e-11
Glyma.10G080600 hypothetical protein NA 1Chr10:9501678–9504456 (+)7.008e-11
Glyma.10G080700 hypothetical protein NA 1Chr10:9510013–9512097 (+)7.008e-11
Glyma.10G080900 hypothetical protein NA 1Chr10:9552268–9552854 (+)7.008e-11
Glyma.10G081200 hypothetical protein NA 1Chr10:9600771–9603988 (-)6.678e-13
Glyma.10G081300 hypothetical protein NA 1Chr10:9621308–9625766 (-)1.934e-11
Glyma.10G082100 hypothetical protein AT3G05680:EMB2016:embryo defective 2016 1Chr10:9934486–9960586 (-)1.171e-11
Glyma.10G082200 hypothetical protein NA 1Chr10:9967027–9970045 (-)8.333e-12
Glyma.12G108600 hypothetical protein NA 1Chr12:9994609–9997302 (-)4.888e-14
Glyma.12G109500 hypothetical protein AT4G03415:PP2C52:Protein phosphatase 2C family protein 1Chr12:10308026–10314332 (-)4.889e-14
Glyma.12G114500 hypothetical protein AT4G22930:PYR4:pyrimidin 4 1Chr12:11396572–11400825 (-)3.146e-11
Glyma.12G114900 hypothetical protein NA 1Chr12:11457987–11462951 (-)3.146e-11
Glyma.12G202200 hypothetical protein AT2G20860:LIP1:lipoic acid synthase 1 1Chr12:36267599–36271584 (+)9.906e-13
Glyma.12G202300 hypothetical protein NA 1Chr12:36275438–36276838 (+)9.906e-13
Glyma.12G202400 hypothetical protein AT4G03415:PP2C52:Protein phosphatase 2C family protein 1Chr12:36289704–36295084 (-)4.64e-11
Glyma.12G203600 EXPB8 AT2G20750:EXPB1:expansin B1 1Chr12:36390283–36394245 (-)7.604e-14
Glyma.12G203700 hypothetical protein AT4G28260:AT4G28260:acyl-UDP-N-acetylglucosamine O-acyltransferase 1Chr12:36406747–36413696 (+)1.408e-12
Glyma.12G204000 hypothetical protein AT1G03687:AT1G03687:DTW domain-containing protein 1Chr12:36428558–36432835 (+)1.031e-12
Glyma.13G134300 hypothetical protein NA 1Chr13:24664171–24665742 (-)8.923e-12
Glyma.13G135300 hypothetical protein NA 1Chr13:24770681–24773826 (+)2.58e-11
Glyma.13G135400 hypothetical protein AT5G12130:PDE149:integral membrane TerC family protein 1Chr13:24786242–24791938 (+)2.58e-11
Glyma.13G135500 hypothetical protein AT5G02780:GSTL1:glutathione transferase lambda 1 1Chr13:24798567–24801567 (+)1.999e-13
Glyma.13G201600 hypothetical protein NA 1Chr13:31521512–31522992 (+)6.776e-12
Glyma.13G203900 hypothetical protein NA 1Chr13:31793697–31796601 (-)7.083e-11
Glyma.14G068100 hypothetical protein AT3G12550:FDM3:XH/XS domain-containing protein 1Chr14:5701618–5711043 (-)7.612e-11
Glyma.14G072200 Ipk1 AT5G42810:IPK1:inositol-pentakisphosphate 2-kinase 1__AT1G22100:AT1G22100:Inositol-pentakisphosphate 2-kinase family pr… 1Chr14:6059598–6063755 (-)1.569e-11
Glyma.14G201700 hypothetical protein NA 1Chr14:46711634–46715644 (-)3.546e-12
Glyma.15G035600 hypothetical protein AT3G46740:TOC75-III:translocon at the outer envelope membrane of chloroplasts 75-III 1Chr15:2830678–2835534 (+)3.819e-11
Glyma.15G121100 hypothetical protein NA 1Chr15:9567797–9570248 (+)5.181e-13
Glyma.15G121300 hypothetical protein AT5G47760:PGLP2:2-phosphoglycolate phosphatase 2 1Chr15:9584685–9590201 (-)2.354e-12
Glyma.15G121500 hypothetical protein AT1G03370:AT1G03370:C2 calcium/lipid-binding and GRAM domain containing protein 1Chr15:9602794–9615281 (+)5.181e-13
Glyma.15G121800 hypothetical protein NA 1Chr15:9643746–9648073 (+)5.181e-13
Glyma.15G124500 MLO-like protein 13 AT4G24250:MLO13:Seven transmembrane MLO family protein 1Chr15:9888761–9894068 (-)4.701e-11
Glyma.16G028100 hypothetical protein AT3G07570:AT3G07570:Cytochrome b561/ferric reductase transmembrane with DOMON related domain-containing protein 1Chr16:2725294–2733429 (-)1.233e-11
Glyma.16G105100 hypothetical protein NA 1Chr16:21259552–21267517 (-)4.603e-11
Glyma.16G105400 hypothetical protein AT2G43040:NPG1:tetratricopeptide repeat (TPR)-containing protein 1Chr16:21357465–21364357 (-)6.275e-12
Glyma.16G113000 hypothetical protein NA 1Chr16:25112070–25116073 (+)2.427e-12
Glyma.16G116200 hypothetical protein AT4G35560:DAW1:Transducin/WD40 repeat-like superfamily protein 1Chr16:25892277–25904773 (+)2.595e-11
Glyma.16G117400 hypothetical protein NA 1Chr16:26234552–26238233 (-)7.137e-12
Glyma.16G119300 hypothetical protein NA 1Chr16:26643902–26644416 (+)4.087e-13
Glyma.16G119400 hypothetical protein NA 1Chr16:26684278–26687087 (+)1.001e-12
Glyma.16G209300 hypothetical protein NA 1Chr16:36856833–36863994 (-)5.028e-11
Glyma.16G210300 hypothetical protein AT1G73340:AT1G73340:Cytochrome P450 superfamily protein 1Chr16:36943073–36948828 (+)1.214e-11
Glyma.16G210400 hypothetical protein AT1G73350:AT1G73350:ankyrin repeat protein 1Chr16:36949685–36953467 (+)1.214e-11
Glyma.17G064000 hypothetical protein AT2G18840:AT2G18840:Integral membrane Yip1 family protein__AT4G30260:AT4G30260:Integral membrane Yip1 family protein 1Chr17:4924830–4930155 (-)6.902e-12
Glyma.17G064200 hypothetical protein AT5G57500:AT5G57500:Galactosyltransferase family protein 1Chr17:4943412–4944357 (-)6.902e-12
Glyma.17G218700 hypothetical protein NA 1Chr17:36986191–36991558 (-)1.342e-11
Glyma.19G012100 hypothetical protein AT3G28150:TBL22:TRICHOME BIREFRINGENCE-LIKE 22 1Chr19:1155711–1161298 (-)7.008e-12
Glyma.19G012300 hypothetical protein NA 1Chr19:1165111–1173031 (-)7.008e-12
Glyma.19G119100 hypothetical protein AT3G03650:EDA5:Exostosin family protein 1Chr19:37668759–37672434 (+)3.882e-13
Glyma.19G119200 hypothetical protein AT3G03630:CS26:cysteine synthase 26 1Chr19:37677773–37683394 (+)3.33e-12
Glyma.20G019800 hypothetical protein AT1G49350:AT1G49350:pfkB-like carbohydrate kinase family protein 1Chr20:2051817–2057262 (+)6.866e-11
Glyma.20G107200 hypothetical protein AT4G38540:AT4G38540:FAD/NAD(P)-binding oxidoreductase family protein 1Chr20:34984922–34988496 (+)1.467e-11