Soybean mGWAS DBExplore The Genetic Basis Of Soybean Metabolism Glycine max
Overview Annotation GWAS Evidence Associated genes

P23595

Metabolite ID
P23595
Deionized mass
254.0677 Da
Average m/z
255.0746
Average RT
14.1619
Adduct
[M+H]+
Association scope
Overlapping genes only
Associated genes
51
GWAS result file
Available
Open in Soybean Metabolome Repository

Candidate annotations

Search compound candidates by deionized mass and tolerance. Follow compound IDs for database records, or use name searches to explore chemistry and soybean literature. About candidate annotations

GWAS Evidence

Dataset: indexed GWAS records.

Settings

SNP counts, plot highlights, gene associations and downloads use P < 10⁻¹⁰. Changing the threshold updates this page together.

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Associated genes

51 genes linked to SNP records with P < 10⁻¹⁰ in the selected scope. Supporting SNP records are counted per feature–gene pair.

Gene ID Alias Description Arabidopsis ortholog Supporting SNP recordsGene interval (1-based)Minimum P
Glyma.19G027000 hypothetical protein NA 4Chr19:3335896–3343744 (+)2.362e-12
Glyma.03G001500 B15-3-5 AT2G38600:AT2G38600:HAD superfamily, subfamily IIIB acid phosphatase 3Chr03:169480–172727 (+)4.85e-11
Glyma.17G218600 hypothetical protein NA 3Chr17:36975400–36982812 (-)5.487e-11
Glyma.08G122200 hypothetical protein NA 2Chr08:9416766–9429995 (-)9.448e-16
Glyma.08G122300 hypothetical protein AT1G29390:COR314-TM2:cold regulated 314 thylakoid membrane 2 2Chr08:9435391–9437279 (+)9.448e-16
Glyma.08G123500 hypothetical protein NA 2Chr08:9494946–9505931 (-)9.448e-16
Glyma.14G201600 hypothetical protein NA 2Chr14:46703283–46706500 (+)9.299e-12
Glyma.16G031600 hypothetical protein NA 2Chr16:2964569–2985013 (+)2.114e-11
Glyma.19G026600 hypothetical protein AT4G13700:PAP23:purple acid phosphatase 23 2Chr19:3303658–3312907 (-)2.362e-12
Glyma.19G029600 hypothetical protein NA 2Chr19:3681517–3690884 (-)7.772e-11
Glyma.02G133800 hypothetical protein AT1G49660:CXE5:carboxyesterase 5 1Chr02:13850366–13851962 (-)4.69e-12
Glyma.02G204700 hypothetical protein AT4G30610:BRS1:alpha/beta-Hydrolases superfamily protein 1Chr02:38993365–39000790 (+)1.6e-12
Glyma.02G205300 hypothetical protein NA 1Chr02:39037472–39038396 (-)3.591e-12
Glyma.03G013500 hypothetical protein AT1G01700:ROPGEF2:RHO guanyl-nucleotide exchange factor 2 1Chr03:1370977–1375024 (+)6.767e-11
Glyma.05G224700 hypothetical protein NA 1Chr05:40351005–40361888 (+)6.36e-12
Glyma.05G226000 hypothetical protein AT5G19730:AT5G19730:Pectin lyase-like superfamily protein 1Chr05:40458098–40461736 (+)1.408e-11
Glyma.05G236700 hypothetical protein AT4G33760:AT4G33760:tRNA synthetase class II (D, K and N) family protein 1Chr05:41301540–41310727 (+)4.32e-11
Glyma.08G117500 hypothetical protein AT4G18780:IRX1:cellulose synthase family protein 1Chr08:9065033–9071774 (-)4.537e-11
Glyma.08G118400 hypothetical protein AT4G18810:AT4G18810:NAD(P)-binding Rossmann-fold superfamily protein 1Chr08:9147404–9153858 (-)4.537e-11
Glyma.08G119300 hypothetical protein AT1G29330:ERD2:ER lumen protein retaining receptor family protein 1Chr08:9198213–9201688 (-)8.99e-11
Glyma.08G122500 hypothetical protein NA 1Chr08:9441329–9445315 (-)9.448e-16
Glyma.08G122600 hypothetical protein NA 1Chr08:9445153–9450502 (+)4.209e-11
Glyma.08G122700 hypothetical protein AT1G29350:AT1G29350:RNA polymerase II degradation factor-like protein (DUF1296) 1Chr08:9452604–9458932 (+)9.448e-16
Glyma.09G249500 hypothetical protein NA 1Chr09:47056885–47062577 (+)3.549e-12
Glyma.09G251800 hypothetical protein AT1G65380:CLV2:Leucine-rich repeat (LRR) family protein 1Chr09:47220796–47224266 (+)2.822e-11
Glyma.10G078700 hypothetical protein NA 1Chr10:8882318–8903950 (+)3.746e-11
Glyma.10G079100 hypothetical protein NA 1Chr10:8960669–8962364 (-)3.746e-11
Glyma.10G079800 hypothetical protein NA 1Chr10:9223520–9228511 (-)3.746e-11
Glyma.10G080000 hypothetical protein AT3G11660:NHL1:NDR1/HIN1-like 1__AT3G52470:AT3G52470:Late embryosis abundant (LEA) hydroxyproline-rich glycoprotein fam… 1Chr10:9258476–9260697 (-)3.746e-11
Glyma.10G081200 hypothetical protein NA 1Chr10:9600771–9603988 (-)2.044e-11
Glyma.10G081700 hypothetical protein NA 1Chr10:9752508–9758422 (+)9.739e-13
Glyma.11G062400 hypothetical protein AT4G36860:AT4G36860:LIM domain-containing protein 1Chr11:4720040–4726569 (+)6.678e-11
Glyma.11G064300 hypothetical protein AT4G36780:BEH2:BES1/BZR1 homolog 2 1Chr11:4849799–4851673 (+)3.781e-11
Glyma.13G135500 hypothetical protein AT5G02780:GSTL1:glutathione transferase lambda 1 1Chr13:24798567–24801567 (+)7.576e-12
Glyma.13G135700 hypothetical protein NA 1Chr13:24812720–24818735 (+)7.576e-12
Glyma.13G135800 hypothetical protein AT5G02800:CDL1:Protein kinase superfamily protein 1Chr13:24820151–24823999 (-)7.576e-12
Glyma.14G093100 hypothetical protein NA 1Chr14:8654730–8655892 (-)6.174e-11
Glyma.14G201700 hypothetical protein NA 1Chr14:46711634–46715644 (-)9.299e-12
Glyma.15G035600 hypothetical protein AT3G46740:TOC75-III:translocon at the outer envelope membrane of chloroplasts 75-III 1Chr15:2830678–2835534 (+)9.732e-11
Glyma.15G121100 hypothetical protein NA 1Chr15:9567797–9570248 (+)1.947e-11
Glyma.15G121300 hypothetical protein AT5G47760:PGLP2:2-phosphoglycolate phosphatase 2 1Chr15:9584685–9590201 (-)7.645e-11
Glyma.15G121500 hypothetical protein AT1G03370:AT1G03370:C2 calcium/lipid-binding and GRAM domain containing protein 1Chr15:9602794–9615281 (+)1.947e-11
Glyma.15G121800 hypothetical protein NA 1Chr15:9643746–9648073 (+)1.947e-11
Glyma.16G105400 hypothetical protein AT2G43040:NPG1:tetratricopeptide repeat (TPR)-containing protein 1Chr16:21357465–21364357 (-)3.795e-11
Glyma.16G182600 hypothetical protein AT5G52400:CYP715A1:cytochrome P450, family 715, subfamily A, polypeptide 1 1Chr16:34364037–34367765 (-)2.335e-11
Glyma.17G064000 hypothetical protein AT2G18840:AT2G18840:Integral membrane Yip1 family protein__AT4G30260:AT4G30260:Integral membrane Yip1 family protein 1Chr17:4924830–4930155 (-)3.925e-11
Glyma.17G064200 hypothetical protein AT5G57500:AT5G57500:Galactosyltransferase family protein 1Chr17:4943412–4944357 (-)3.925e-11
Glyma.17G218700 hypothetical protein NA 1Chr17:36986191–36991558 (-)5.487e-11
Glyma.18G045700 hypothetical protein NA 1Chr18:3956176–3958846 (+)3.489e-11
Glyma.19G119100 hypothetical protein AT3G03650:EDA5:Exostosin family protein 1Chr19:37668759–37672434 (+)9.853e-13
Glyma.19G119200 hypothetical protein AT3G03630:CS26:cysteine synthase 26 1Chr19:37677773–37683394 (+)8.355e-12