Soybean mGWAS DBExplore The Genetic Basis Of Soybean Metabolism Glycine max
Overview Annotation GWAS Evidence Associated genes

P23589

Metabolite ID
P23589
Deionized mass
267.1496 Da
Average m/z
268.1545
Average RT
14.1613
Adduct
[M+H]+
Association scope
Overlapping genes only
Associated genes
56
GWAS result file
Available
Open in Soybean Metabolome Repository

Candidate annotations

Search compound candidates by deionized mass and tolerance. Follow compound IDs for database records, or use name searches to explore chemistry and soybean literature. About candidate annotations

GWAS Evidence

Dataset: indexed GWAS records.

Settings

SNP counts, plot highlights, gene associations and downloads use P < 10⁻¹⁰. Changing the threshold updates this page together.

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Associated genes

56 genes linked to SNP records with P < 10⁻¹⁰ in the selected scope. Supporting SNP records are counted per feature–gene pair.

Gene ID Alias Description Arabidopsis ortholog Supporting SNP recordsGene interval (1-based)Minimum P
Glyma.20G105300 hypothetical protein AT4G38470:STY46:ACT-like protein tyrosine kinase family protein 6Chr20:34757381–34771672 (+)7.382e-11
Glyma.16G209300 hypothetical protein NA 5Chr16:36856833–36863994 (-)2.61e-12
Glyma.08G226000 hypothetical protein AT3G13062:AT3G13062:Polyketide cyclase/dehydrase and lipid transport superfamily protein 3Chr08:18321377–18335864 (-)4.227e-11
Glyma.08G123500 hypothetical protein NA 2Chr08:9494946–9505931 (-)8.631e-12
Glyma.14G201600 hypothetical protein NA 2Chr14:46703283–46706500 (+)5.014e-17
Glyma.18G196200 hypothetical protein AT3G09100:AT3G09100:mRNA capping enzyme family protein 2Chr18:47102746–47129707 (+)4.002e-11
Glyma.19G029600 hypothetical protein NA 2Chr19:3681517–3690884 (-)4.841e-11
Glyma.20G107200 hypothetical protein AT4G38540:AT4G38540:FAD/NAD(P)-binding oxidoreductase family protein 2Chr20:34984922–34988496 (+)2.366e-15
Glyma.01G173900 hypothetical protein NA 1Chr01:51092004–51094319 (+)4.631e-11
Glyma.03G209700 hypothetical protein NA 1Chr03:41646792–41648527 (+)3.465e-12
Glyma.05G226400 hypothetical protein AT4G29140:ADS1:MATE efflux family protein 1Chr05:40480968–40482410 (-)5.655e-11
Glyma.05G232400 hypothetical protein AT3G24440:VRN5:Fibronectin type III domain-containing protein 1Chr05:40992124–41003814 (+)4.831e-11
Glyma.05G232600 hypothetical protein AT4G13360:AT4G13360:ATP-dependent caseinolytic (Clp) protease/crotonase family protein__AT3G24360:AT3G24360:ATP-depende… 1Chr05:41009642–41015826 (+)4.775e-11
Glyma.05G232800 hypothetical protein AT3G18500:AT3G18500:DNAse I-like superfamily protein 1Chr05:41022747–41030067 (-)4.775e-11
Glyma.05G233100 hypothetical protein NA 1Chr05:41041130–41048359 (-)4.775e-11
Glyma.05G233400 ALMT9 aluminum-activated malate transporter 9 AT3G18440:ALMT9:aluminum-activated malate transporter 9 1Chr05:41058365–41063472 (-)4.775e-11
Glyma.07G013400 hypothetical protein AT3G21310:AT3G21310:Core-2/I-branching beta-1,6-N-acetylglucosaminyltransferase family protein 1Chr07:1028243–1033837 (-)1.38e-12
Glyma.07G013500 hypothetical protein NA 1Chr07:1036819–1041984 (-)1.38e-12
Glyma.07G017600 hypothetical protein NA 1Chr07:1415837–1422680 (+)1.216e-11
Glyma.07G018100 hypothetical protein NA 1Chr07:1442368–1445430 (-)2.456e-11
Glyma.07G018300 hypothetical protein AT3G27750:EMB3123:PPR containing protein 1Chr07:1457706–1458428 (+)2.456e-11
Glyma.07G071000 hypothetical protein AT4G00480:ATMYC1:basic helix-loop-helix (bHLH) DNA-binding superfamily protein 1Chr07:6464646–6470484 (+)3.376e-11
Glyma.07G202300 IFS1 isoflavone synthase 1 NA 1Chr07:37166660–37169027 (+)5.442e-11
Glyma.08G122200 hypothetical protein NA 1Chr08:9416766–9429995 (-)8.631e-12
Glyma.08G122300 hypothetical protein AT1G29390:COR314-TM2:cold regulated 314 thylakoid membrane 2 1Chr08:9435391–9437279 (+)8.631e-12
Glyma.08G122500 hypothetical protein NA 1Chr08:9441329–9445315 (-)8.631e-12
Glyma.08G122700 hypothetical protein AT1G29350:AT1G29350:RNA polymerase II degradation factor-like protein (DUF1296) 1Chr08:9452604–9458932 (+)8.631e-12
Glyma.08G204800 hypothetical protein AT3G16140:PSAH-1:photosystem I subunit H-1 1Chr08:16601039–16602646 (+)1.144e-11
Glyma.08G211800 hypothetical protein NA 1Chr08:17104514–17105442 (-)6.801e-11
Glyma.08G226100 hypothetical protein AT3G13060:ECT5:evolutionarily conserved C-terminal region 5 1Chr08:18339384–18347070 (-)4.227e-11
Glyma.08G226400 hypothetical protein AT3G13050:NiaP:Major facilitator superfamily protein 1Chr08:18370226–18374060 (-)4.227e-11
Glyma.09G268900 hypothetical protein NA 1Chr09:48638803–48644136 (+)1.176e-12
Glyma.09G270200 hypothetical protein AT5G01020:AT5G01020:Protein kinase superfamily protein 1Chr09:48725417–48728520 (-)1.595e-11
Glyma.09G270400 hypothetical protein NA 1Chr09:48735991–48740879 (+)2.622e-13
Glyma.14G201700 hypothetical protein NA 1Chr14:46711634–46715644 (-)5.014e-17
Glyma.14G201800 hypothetical protein AT5G58390:AT5G58390:Peroxidase superfamily protein 1Chr14:46728613–46733836 (+)1.553e-12
Glyma.15G070100 hypothetical protein AT1G61140:EDA16:SNF2 domain-containing protein / helicase domain-containing protein / zinc finger protein-like protein 1Chr15:5355553–5364428 (+)1.554e-13
Glyma.15G071600 hypothetical protein AT4G21660:AT4G21660:proline-rich spliceosome-associated (PSP) family protein 1Chr15:5481672–5488866 (-)1.554e-13
Glyma.15G124000 hypothetical protein NA 1Chr15:9845097–9849312 (-)1.172e-12
Glyma.16G115800 hypothetical protein NA 1Chr16:25719040–25728740 (-)3.574e-11
Glyma.16G118100 hypothetical protein AT2G17570:cPT1:Undecaprenyl pyrophosphate synthetase family protein 1Chr16:26324650–26336836 (+)1.247e-11
Glyma.16G119300 hypothetical protein NA 1Chr16:26643902–26644416 (+)1.733e-11
Glyma.16G189100 hypothetical protein AT1G05190:emb2394:Ribosomal protein L6 family 1Chr16:35170253–35173950 (-)6.801e-12
Glyma.16G209000 hypothetical protein NA 1Chr16:36841786–36845498 (-)3.298e-12
Glyma.16G210300 hypothetical protein AT1G73340:AT1G73340:Cytochrome P450 superfamily protein 1Chr16:36943073–36948828 (+)2.425e-12
Glyma.16G210400 hypothetical protein AT1G73350:AT1G73350:ankyrin repeat protein 1Chr16:36949685–36953467 (+)2.425e-12
Glyma.17G215500 KNAT5 NA 1Chr17:36212363–36217688 (-)1.323e-12
Glyma.19G012100 hypothetical protein AT3G28150:TBL22:TRICHOME BIREFRINGENCE-LIKE 22 1Chr19:1155711–1161298 (-)9.221e-12
Glyma.19G012300 hypothetical protein NA 1Chr19:1165111–1173031 (-)9.221e-12
Glyma.20G104900 hypothetical protein NA 1Chr20:34706863–34713989 (-)7.382e-11
Glyma.20G106900 hypothetical protein NA 1Chr20:34962043–34967985 (+)3.147e-14
Glyma.20G107500 hypothetical protein AT2G16910:AMS:basic helix-loop-helix (bHLH) DNA-binding superfamily protein 1Chr20:35011922–35015196 (-)1.39e-12
Glyma.20G108900 hypothetical protein AT4G24175:AT4G24175:kinesin-like protein 1Chr20:35119868–35122488 (+)1.708e-14
Glyma.20G109600 hypothetical protein AT3G14290:PAE2:20S proteasome alpha subunit E2__AT1G53850:PAE1:20S proteasome alpha subunit E1 1Chr20:35200934–35205885 (-)6.07e-13
Glyma.20G109800 hypothetical protein AT2G35130:AT2G35130:Tetratricopeptide repeat (TPR)-like superfamily protein 1Chr20:35213258–35219502 (+)4.614e-17
Glyma.20G110000 hypothetical protein AT3G54260:TBL36:TRICHOME BIREFRINGENCE-LIKE 36 1Chr20:35229423–35231861 (+)5.318e-11