Soybean mGWAS DBExplore The Genetic Basis Of Soybean Metabolism Glycine max
Overview Annotation GWAS Evidence Associated genes

P23493

Metabolite ID
P23493
Deionized mass
665.2736 Da
Average m/z
666.2778
Average RT
14.1430
Adduct
[M+H]+
Association scope
Overlapping genes only
Associated genes
45
GWAS result file
Available
Open in Soybean Metabolome Repository

Candidate annotations

Search compound candidates by deionized mass and tolerance. Follow compound IDs for database records, or use name searches to explore chemistry and soybean literature. About candidate annotations

GWAS Evidence

Dataset: indexed GWAS records.

Settings

SNP counts, plot highlights, gene associations and downloads use P < 10⁻¹⁰. Changing the threshold updates this page together.

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Associated genes

45 genes linked to SNP records with P < 10⁻¹⁰ in the selected scope. Supporting SNP records are counted per feature–gene pair.

Gene ID Alias Description Arabidopsis ortholog Supporting SNP recordsGene interval (1-based)Minimum P
Glyma.16G209300 hypothetical protein NA 5Chr16:36856833–36863994 (-)3.88e-12
Glyma.06G305700 hypothetical protein AT2G05710:ACO3:aconitase 3 3Chr06:49451501–49461369 (-)1.821e-12
Glyma.16G210200 hypothetical protein NA 3Chr16:36933402–36938940 (+)5.622e-11
Glyma.03G023000 hypothetical protein AT4G00220:JLO:Lateral organ boundaries (LOB) domain family protein 2Chr03:2423540–2428634 (-)1.157e-12
Glyma.09G058900 hypothetical protein NA 2Chr09:5397968–5404650 (-)5.029e-13
Glyma.01G173900 hypothetical protein NA 1Chr01:51092004–51094319 (+)5.548e-11
Glyma.01G175500 hypothetical protein AT3G50660:DWF4:Cytochrome P450 superfamily protein 1Chr01:51219681–51224948 (+)9.028e-12
Glyma.02G205400 hypothetical protein AT5G57880:MPS1:multipolar spindle 1 1Chr02:39040135–39043181 (-)5.79e-11
Glyma.03G209700 hypothetical protein NA 1Chr03:41646792–41648527 (+)2.325e-12
Glyma.05G124700 hypothetical protein NA 1Chr05:31807311–31817648 (+)4.415e-13
Glyma.06G084800 hypothetical protein NA 1Chr06:6515571–6517480 (-)6.727e-12
Glyma.06G085000 hypothetical protein NA 1Chr06:6524339–6529016 (-)6.727e-12
Glyma.06G085100 hypothetical protein NA 1Chr06:6531956–6537295 (-)6.727e-12
Glyma.06G085200 hypothetical protein NA 1Chr06:6540849–6545557 (+)1.074e-11
Glyma.06G112300 hypothetical protein AT1G44780:AT1G44780:translation initiation factor__AT4G08310:AT4G08310:DNA ligase 1Chr06:9113982–9118848 (-)5.727e-12
Glyma.06G112600 hypothetical protein AT1G77620:AT1G77620:P-loop containing nucleoside triphosphate hydrolases superfamily protein 1Chr06:9134358–9144986 (+)5.727e-12
Glyma.06G112700 hypothetical protein AT1G44760:AT1G44760:Adenine nucleotide alpha hydrolases-like superfamily protein 1Chr06:9156973–9158659 (+)5.727e-12
Glyma.06G118500 hypothetical protein NA 1Chr06:9644661–9650144 (-)1.739e-12
Glyma.06G118800 hypothetical protein NA 1Chr06:9666921–9667708 (+)1.739e-12
Glyma.06G121000 hypothetical protein NA 1Chr06:9848464–9850191 (-)8.518e-11
Glyma.06G129800 hypothetical protein AT5G53030:AT5G53030:uncharacterized protein 1Chr06:10667029–10669377 (+)6.94e-12
Glyma.06G130100 hypothetical protein AT3G49290:ABIL2:ABL interactor-like protein 2 1Chr06:10695256–10699675 (+)6.94e-12
Glyma.06G130300 hypothetical protein AT5G53080:AT5G53080:Tetratricopeptide repeat (TPR)-like superfamily protein 1Chr06:10709045–10716245 (-)1.261e-11
Glyma.06G130700 hypothetical protein AT5G53060:RCF3:RNA-binding KH domain-containing protein 1Chr06:10742110–10747597 (-)1.337e-12
Glyma.06G305300 hypothetical protein NA 1Chr06:49431590–49435985 (-)1.821e-12
Glyma.06G305600 hypothetical protein NA 1Chr06:49446542–49450635 (-)1.821e-12
Glyma.09G080200 hypothetical protein NA 1Chr09:9256042–9263239 (-)8.438e-13
Glyma.09G082000 hypothetical protein NA 1Chr09:9638564–9650178 (+)1.268e-11
Glyma.13G081100 hypothetical protein NA 1Chr13:18881427–18886462 (-)1.887e-11
Glyma.14G044000 hypothetical protein AT5G62290:AT5G62290:nucleotide-sensitive chloride conductance regulator (ICln) family protein 1Chr14:3343611–3346483 (+)2.841e-11
Glyma.14G066800 hypothetical protein NA 1Chr14:5511222–5513114 (+)4.029e-12
Glyma.15G009800 hypothetical protein NA 1Chr15:753771–758859 (-)4.409e-11
Glyma.15G124000 hypothetical protein NA 1Chr15:9845097–9849312 (-)4.269e-11
Glyma.15G124500 MLO-like protein 13 AT4G24250:MLO13:Seven transmembrane MLO family protein 1Chr15:9888761–9894068 (-)2.198e-12
Glyma.16G160900 hypothetical protein NA 1Chr16:32013447–32016235 (+)5.953e-11
Glyma.16G207900 hypothetical protein AT5G08450:AT5G08450:zinc finger CCCH domain protein 1Chr16:36754888–36763450 (+)7.561e-11
Glyma.16G209000 hypothetical protein NA 1Chr16:36841786–36845498 (-)2.395e-12
Glyma.16G209400 hypothetical protein AT1G17840:ABCG11:white-brown complex-like protein 1Chr16:36871978–36878151 (-)7.125e-11
Glyma.16G209900 hypothetical protein NA 1Chr16:36919141–36924601 (+)5.622e-11
Glyma.16G210300 hypothetical protein AT1G73340:AT1G73340:Cytochrome P450 superfamily protein 1Chr16:36943073–36948828 (+)7.092e-13
Glyma.16G210400 hypothetical protein AT1G73350:AT1G73350:ankyrin repeat protein 1Chr16:36949685–36953467 (+)6.261e-13
Glyma.17G008800 hypothetical protein NA 1Chr17:725683–728962 (+)9.538e-11
Glyma.17G144000 hypothetical protein AT4G16760:ACX1:acyl-CoA oxidase 1 1Chr17:11759547–11765498 (-)9.275e-11
Glyma.18G251900 hypothetical protein AT3G60320:AT3G60320:bZIP domain class transcription factor (DUF630 and DUF632)__AT1G02110:AT1G02110:bZIP domain class t… 1Chr18:53855786–53862322 (-)2.645e-13
Glyma.20G112600 hypothetical protein AT5G04310:AT5G04310:Pectin lyase-like superfamily protein 1Chr20:35468911–35474203 (+)9.192e-12