Soybean mGWAS DBExplore The Genetic Basis Of Soybean Metabolism Glycine max
Overview Annotation GWAS Evidence Associated genes

P23444

Metabolite ID
P23444
Deionized mass
332.1359 Da
Average m/z
333.1418
Average RT
14.1311
Adduct
[M+H]+
Association scope
Overlapping genes only
Associated genes
56
GWAS result file
Available
Open in Soybean Metabolome Repository

Candidate annotations

Search compound candidates by deionized mass and tolerance. Follow compound IDs for database records, or use name searches to explore chemistry and soybean literature. About candidate annotations

GWAS Evidence

Dataset: indexed GWAS records.

Settings

SNP counts, plot highlights, gene associations and downloads use P < 10⁻¹⁰. Changing the threshold updates this page together.

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Associated genes

56 genes linked to SNP records with P < 10⁻¹⁰ in the selected scope. Supporting SNP records are counted per feature–gene pair.

Gene ID Alias Description Arabidopsis ortholog Supporting SNP recordsGene interval (1-based)Minimum P
Glyma.19G011800 hypothetical protein AT3G01420:DOX1:Peroxidase superfamily protein 4Chr19:1134716–1143232 (+)1.911e-13
Glyma.06G305700 hypothetical protein AT2G05710:ACO3:aconitase 3 3Chr06:49451501–49461369 (-)5.116e-13
Glyma.06G305100 hypothetical protein NA 2Chr06:49413291–49417661 (-)5.349e-13
Glyma.06G305300 hypothetical protein NA 2Chr06:49431590–49435985 (-)5.116e-13
Glyma.14G076000 hypothetical protein AT5G42960:AT5G42960:outer envelope pore 24B-like protein 2Chr14:6371619–6375055 (+)8.452e-12
Glyma.19G011700 hypothetical protein AT3G01420:DOX1:Peroxidase superfamily protein 2Chr19:1123637–1130946 (+)8.706e-14
Glyma.19G011900 hypothetical protein AT3G28140:AT3G28140:RNA ligase/cyclic nucleotide phosphodiesterase family protein__AT5G40190:AT5G40190:RNA ligase/cycli… 2Chr19:1148510–1149495 (+)1.911e-13
Glyma.19G012100 hypothetical protein AT3G28150:TBL22:TRICHOME BIREFRINGENCE-LIKE 22 2Chr19:1155711–1161298 (-)3.902e-15
Glyma.19G012300 hypothetical protein NA 2Chr19:1165111–1173031 (-)3.902e-15
Glyma.01G169700 hypothetical protein AT4G36410:UBC17:ubiquitin-conjugating enzyme 17 1Chr01:50715084–50719427 (-)8.73e-11
Glyma.01G169800 hypothetical protein AT4G36400:D2HGDH:FAD-linked oxidases family protein 1Chr01:50726088–50733347 (-)8.73e-11
Glyma.03G022100 hypothetical protein AT4G32430:AT4G32430:Pentatricopeptide repeat (PPR) superfamily protein 1Chr03:2301675–2307263 (+)2.94e-11
Glyma.04G086600 hypothetical protein NA 1Chr04:7374806–7380808 (+)2.095e-11
Glyma.05G137500 hypothetical protein NA 1Chr05:33012282–33015297 (-)1.011e-11
Glyma.05G137600 hypothetical protein NA 1Chr05:33018107–33020120 (-)3.571e-11
Glyma.06G079400 hypothetical protein NA 1Chr06:6105463–6107101 (+)2.949e-11
Glyma.06G084800 hypothetical protein NA 1Chr06:6515571–6517480 (-)9.139e-11
Glyma.06G085000 hypothetical protein NA 1Chr06:6524339–6529016 (-)9.139e-11
Glyma.06G085100 hypothetical protein NA 1Chr06:6531956–6537295 (-)9.139e-11
Glyma.06G125200 hypothetical protein AT4G27940:MTM1:manganese tracking factor for mitochondrial SOD2 1Chr06:10209787–10215982 (+)1.126e-11
Glyma.06G125300 hypothetical protein AT5G24105:AGP41:arabinogalactan protein 41 1Chr06:10216506–10218901 (-)1.126e-11
Glyma.06G126500 hypothetical protein AT5G04070:AT5G04070:NAD(P)-binding Rossmann-fold superfamily protein 1Chr06:10367536–10373426 (-)1.326e-12
Glyma.06G305200 hypothetical protein AT3G21690:AT3G21690:MATE efflux family protein 1Chr06:49420013–49426780 (-)4.454e-15
Glyma.06G305600 hypothetical protein NA 1Chr06:49446542–49450635 (-)5.116e-13
Glyma.06G320000 hypothetical protein AT1G05740:AT1G05740:FAM136A-like protein (DUF842) 1Chr06:50870241–50873816 (+)1.93e-11
Glyma.06G320100 hypothetical protein AT5G56290:PEX5:peroxin 5 1Chr06:50874167–50888925 (-)1.93e-11
Glyma.07G075000 hypothetical protein AT5G60990:AT5G60990:DEA(D/H)-box RNA helicase family protein 1Chr07:6821674–6829551 (-)4.789e-15
Glyma.07G075300 hypothetical protein NA 1Chr07:6843882–6845602 (-)4.789e-15
Glyma.07G075400 hypothetical protein NA 1Chr07:6849233–6853058 (+)1.485e-12
Glyma.07G091400 COL21 CONSTANS-like zinc finger protein AT1G25440:BBX15:B-box type zinc finger protein with CCT domain-containing protein 1Chr07:8539101–8547001 (+)1.468e-11
Glyma.07G093700 hypothetical protein AT3G18290:BTS:zinc finger protein-like protein 1Chr07:8723740–8734056 (-)7.5e-11
Glyma.07G100400 hypothetical protein AT3G18050:AT3G18050:GPI-anchored protein 1Chr07:9523110–9526319 (+)6.745e-11
Glyma.08G016700 hypothetical protein AT1G63840:AT1G63840:RING/U-box superfamily protein 1Chr08:1330226–1331366 (-)3.353e-12
Glyma.08G119300 hypothetical protein AT1G29330:ERD2:ER lumen protein retaining receptor family protein 1Chr08:9198213–9201688 (-)6.389e-11
Glyma.09G016800 hypothetical protein NA 1Chr09:1300913–1311894 (+)3.476e-11
Glyma.09G080200 hypothetical protein NA 1Chr09:9256042–9263239 (-)4.862e-13
Glyma.09G082000 hypothetical protein NA 1Chr09:9638564–9650178 (+)2.379e-17
Glyma.09G084300 hypothetical protein AT2G34680:AIR9:Outer arm dynein light chain 1 protein 1Chr09:10129602–10197250 (-)6.552e-16
Glyma.09G133800 hypothetical protein NA 1Chr09:33268295–33269240 (+)1.932e-11
Glyma.09G233700 hypothetical protein AT1G33430:AT1G33430:Galactosyltransferase family protein 1Chr09:45632775–45635630 (-)7.183e-13
Glyma.13G135500 hypothetical protein AT5G02780:GSTL1:glutathione transferase lambda 1 1Chr13:24798567–24801567 (+)2.946e-11
Glyma.13G135700 hypothetical protein NA 1Chr13:24812720–24818735 (+)2.946e-11
Glyma.13G135800 hypothetical protein AT5G02800:CDL1:Protein kinase superfamily protein 1Chr13:24820151–24823999 (-)2.946e-11
Glyma.13G181100 hypothetical protein AT2G47960:AT2G47960:trafficking protein particle complex subunit-like protein 1Chr13:29426889–29433599 (-)6.198e-11
Glyma.14G017600 hypothetical protein AT5G55280:FTSZ1-1:homolog of bacterial cytokinesis Z-ring protein FTSZ 1-1 1Chr14:1257629–1260935 (+)4.345e-12
Glyma.14G066800 hypothetical protein NA 1Chr14:5511222–5513114 (+)1.089e-14
Glyma.14G075900 hypothetical protein NA 1Chr14:6362111–6364010 (-)4.032e-14
Glyma.14G076100 hypothetical protein NA 1Chr14:6375700–6379969 (+)4.29e-11
Glyma.14G077100 hypothetical protein AT5G42610:AT5G42610:calcium uniporter (DUF607) 1Chr14:6486139–6488935 (+)7.264e-16
Glyma.14G077200 hypothetical protein AT5G42620:AT5G42620:metalloendopeptidase / zinc ion binding protein 1Chr14:6498564–6506068 (+)7.264e-16
Glyma.14G077300 hypothetical protein AT1G75040:PR5:pathosis-related protein 5 1Chr14:6508609–6520744 (-)7.264e-16
Glyma.14G078400 hypothetical protein NA 1Chr14:6634738–6639304 (+)7.169e-11
Glyma.14G082300 hypothetical protein AT5G42750:BKI1:BRI1 kinase inhibitor 1 1Chr14:7130733–7132305 (+)2.163e-12
Glyma.19G011600 hypothetical protein NA 1Chr19:1111789–1116419 (+)8.707e-14
Glyma.20G019500 hypothetical protein AT1G21065:AT1G21065:secondary thiamine-phosphate synthase enzyme 1Chr20:2039210–2040459 (+)9.08e-13
Glyma.20G019700 hypothetical protein NA 1Chr20:2047020–2050862 (-)1.089e-11