Soybean mGWAS DBExplore The Genetic Basis Of Soybean Metabolism Glycine max
Overview Annotation GWAS Evidence Associated genes

P23188

Metabolite ID
P23188
Deionized mass
289.2449 Da
Average m/z
290.2535
Average RT
14.0606
Adduct
[M+H]+
Association scope
Overlapping genes only
Associated genes
66
GWAS result file
Available
Open in Soybean Metabolome Repository

Candidate annotations

Search compound candidates by deionized mass and tolerance. Follow compound IDs for database records, or use name searches to explore chemistry and soybean literature. About candidate annotations

GWAS Evidence

Dataset: indexed GWAS records.

Settings

SNP counts, plot highlights, gene associations and downloads use P < 10⁻¹⁰. Changing the threshold updates this page together.

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Associated genes

66 genes linked to SNP records with P < 10⁻¹⁰ in the selected scope. Supporting SNP records are counted per feature–gene pair.

Gene ID Alias Description Arabidopsis ortholog Supporting SNP recordsGene interval (1-based)Minimum P
Glyma.19G037200 hypothetical protein AT5G15680:AT5G15680:ARM repeat superfamily protein 4Chr19:5178930–5212367 (+)1.104e-13
Glyma.03G021400 hypothetical protein AT2G45540:AT2G45540:WD-40 repeat family protein / beige-like protein 3Chr03:2202325–2234931 (+)4.481e-11
Glyma.13G134400 hypothetical protein AT2G37370:AT2G37370:centrosomal protein of 135 kDa-like protein 3Chr13:24677399–24693129 (-)3.73e-14
Glyma.03G021600 hypothetical protein AT2G45510:CYP704A2:cytochrome P450, family 704, subfamily A, polypeptide 2__AT2G44890:CYP704A1:cytochrome P450, family … 2Chr03:2240686–2246512 (-)2.797e-11
Glyma.07G100400 hypothetical protein AT3G18050:AT3G18050:GPI-anchored protein 2Chr07:9523110–9526319 (+)2.42e-11
Glyma.18G106600 hypothetical protein NA 2Chr18:11947553–11951868 (+)7.699e-13
Glyma.19G011800 hypothetical protein AT3G01420:DOX1:Peroxidase superfamily protein 2Chr19:1134716–1143232 (+)1.878e-13
Glyma.19G029600 hypothetical protein NA 2Chr19:3681517–3690884 (-)3.611e-11
Glyma.03G018600 hypothetical protein AT2G45695:AT2G45695:Ubiquitin related modifier 1 1Chr03:1859210–1862572 (-)1.117e-11
Glyma.03G018800 hypothetical protein AT2G45680:TCP9:TCP family transcription factor 1Chr03:1875182–1876855 (+)3.831e-11
Glyma.03G022900 hypothetical protein NA 1Chr03:2409690–2420328 (-)1.592e-11
Glyma.03G023000 hypothetical protein AT4G00220:JLO:Lateral organ boundaries (LOB) domain family protein 1Chr03:2423540–2428634 (-)4.488e-12
Glyma.03G040600 hypothetical protein AT2G38400:AGT3:alanine:glyoxylate aminotransferase 3 1Chr03:5113019–5121557 (+)4.823e-12
Glyma.05G127800 hypothetical protein AT4G18240:SS4:starch synthase 4 1Chr05:32125404–32138244 (+)2.014e-12
Glyma.05G127900 SAD1 AT5G48870:SAD1:Small nuclear ribonucleoprotein family protein 1Chr05:32139620–32141770 (-)2.014e-12
Glyma.05G128200 hypothetical protein AT5G46330:FLS2:Leucine-rich receptor-like protein kinase family protein 1Chr05:32158034–32162343 (-)2.014e-12
Glyma.05G131200 hypothetical protein AT5G58230:MSI1:Transducin/WD40 repeat-like superfamily protein 1Chr05:32421116–32425198 (-)6.535e-11
Glyma.05G236700 hypothetical protein AT4G33760:AT4G33760:tRNA synthetase class II (D, K and N) family protein 1Chr05:41301540–41310727 (+)1.228e-13
Glyma.05G237800 hypothetical protein AT1G48790:AMSH1:associated molecule with the SH3 domain of STAM 1 1Chr05:41406807–41413022 (-)1.787e-17
Glyma.06G112300 hypothetical protein AT1G44780:AT1G44780:translation initiation factor__AT4G08310:AT4G08310:DNA ligase 1Chr06:9113982–9118848 (-)2.122e-11
Glyma.06G112600 hypothetical protein AT1G77620:AT1G77620:P-loop containing nucleoside triphosphate hydrolases superfamily protein 1Chr06:9134358–9144986 (+)2.122e-11
Glyma.06G112700 hypothetical protein AT1G44760:AT1G44760:Adenine nucleotide alpha hydrolases-like superfamily protein 1Chr06:9156973–9158659 (+)2.122e-11
Glyma.06G125200 hypothetical protein AT4G27940:MTM1:manganese tracking factor for mitochondrial SOD2 1Chr06:10209787–10215982 (+)2.415e-12
Glyma.06G125300 hypothetical protein AT5G24105:AGP41:arabinogalactan protein 41 1Chr06:10216506–10218901 (-)2.415e-12
Glyma.06G126500 hypothetical protein AT5G04070:AT5G04070:NAD(P)-binding Rossmann-fold superfamily protein 1Chr06:10367536–10373426 (-)3.075e-14
Glyma.06G126900 hypothetical protein AT5G04520:AT5G04520:3-oxoacyl-acyl-carrier synthase-like protein (Protein of unknown function DUF455) 1Chr06:10403126–10408307 (-)1.433e-12
Glyma.06G129800 hypothetical protein AT5G53030:AT5G53030:uncharacterized protein 1Chr06:10667029–10669377 (+)1.519e-11
Glyma.06G130100 hypothetical protein AT3G49290:ABIL2:ABL interactor-like protein 2 1Chr06:10695256–10699675 (+)1.519e-11
Glyma.06G130300 hypothetical protein AT5G53080:AT5G53080:Tetratricopeptide repeat (TPR)-like superfamily protein 1Chr06:10709045–10716245 (-)1.469e-11
Glyma.06G134900 hypothetical protein AT4G27670:HSP21:heat shock protein 21 1Chr06:11083841–11088991 (+)7.434e-12
Glyma.07G091400 COL21 CONSTANS-like zinc finger protein AT1G25440:BBX15:B-box type zinc finger protein with CCT domain-containing protein 1Chr07:8539101–8547001 (+)7.939e-13
Glyma.07G095400 hypothetical protein NA 1Chr07:8914725–8920132 (+)5.766e-12
Glyma.08G016700 hypothetical protein AT1G63840:AT1G63840:RING/U-box superfamily protein 1Chr08:1330226–1331366 (-)1.487e-13
Glyma.08G202000 hypothetical protein AT1G52150:ATHB-15:Homeobox-leucine zipper family protein / lipid-binding START domain-containing protein 1Chr08:16375907–16384294 (-)1.295e-11
Glyma.09G052700 hypothetical protein AT1G31120:KUP10:K+ uptake permease 10 1Chr09:4617652–4626364 (+)4.148e-13
Glyma.09G082000 hypothetical protein NA 1Chr09:9638564–9650178 (+)6.779e-11
Glyma.12G008300 hypothetical protein AT3G21640:TWD1:FKBP-type peptidyl-prolyl cis-trans isomerase family protein 1Chr12:613939–617457 (+)8.363e-11
Glyma.13G134300 hypothetical protein NA 1Chr13:24664171–24665742 (-)1.974e-12
Glyma.13G134500 hypothetical protein AT3G09560:PAH1:Lipin family protein 1Chr13:24696109–24705068 (-)3.73e-14
Glyma.14G067800 hypothetical protein AT3G12380:ARP5:actin-related protein 5 1Chr14:5675792–5680343 (+)4.167e-11
Glyma.14G068100 hypothetical protein AT3G12550:FDM3:XH/XS domain-containing protein 1Chr14:5701618–5711043 (-)2.85e-11
Glyma.14G068500 hypothetical protein NA 1Chr14:5741909–5745574 (-)7.183e-14
Glyma.14G069500 hypothetical protein AT5G37810:NIP4;1:NOD26-like intrinsic protein 4;1 1Chr14:5822246–5825628 (-)2.692e-17
Glyma.14G075900 hypothetical protein NA 1Chr14:6362111–6364010 (-)1.266e-11
Glyma.15G124000 hypothetical protein NA 1Chr15:9845097–9849312 (-)4.877e-13
Glyma.15G124500 MLO-like protein 13 AT4G24250:MLO13:Seven transmembrane MLO family protein 1Chr15:9888761–9894068 (-)3.067e-14
Glyma.16G050900 COL16 NA 1Chr16:4874634–4878624 (+)6.832e-12
Glyma.16G057600 hypothetical protein AT3G27170:CLC-B:chloride channel B 1Chr16:5650591–5655830 (+)5.989e-11
Glyma.16G117400 hypothetical protein NA 1Chr16:26234552–26238233 (-)5.624e-11
Glyma.17G215500 KNAT5 NA 1Chr17:36212363–36217688 (-)2.596e-11
Glyma.18G044900 hypothetical protein AT1G66120:AAE11:AMP-dependent synthetase and ligase family protein__AT1G68270:AT1G68270:AMP-dependent synthetase and li… 1Chr18:3881382–3884162 (+)1.83e-11
Glyma.18G045700 hypothetical protein NA 1Chr18:3956176–3958846 (+)4.157e-11
Glyma.18G106700 hypothetical protein NA 1Chr18:11956201–11957138 (-)3.054e-11
Glyma.18G106800 hypothetical protein AT2G42880:MPK20:MAP kinase 20 1Chr18:11959920–11966545 (-)3.054e-11
Glyma.19G005200 hypothetical protein AT3G27640:AT3G27640:Transducin/WD40 repeat-like superfamily protein 1Chr19:472201–476152 (-)1.66e-12
Glyma.19G011700 hypothetical protein AT3G01420:DOX1:Peroxidase superfamily protein 1Chr19:1123637–1130946 (+)4.626e-11
Glyma.19G037400 hypothetical protein AT5G38820:AT5G38820:Transmembrane amino acid transporter family protein 1Chr19:5224298–5228610 (-)1.104e-13
Glyma.19G038000 hypothetical protein AT3G02350:GAUT9:galacturonosyltransferase 9 1Chr19:5321094–5324327 (+)1.104e-13
Glyma.19G038100 hypothetical protein NA 1Chr19:5350324–5355097 (+)3.831e-11
Glyma.19G038300 hypothetical protein NA 1Chr19:5381177–5383149 (+)1.104e-13
Glyma.19G038400 hypothetical protein AT3G02360:AT3G02360:6-phosphogluconate dehydrogenase family protein 1Chr19:5386122–5388865 (+)1.104e-13
Glyma.19G040100 hypothetical protein AT3G02460:AT3G02460:Ypt/Rab-GAP domain of gyp1p superfamily protein 1Chr19:5773912–5781906 (-)2.441e-11
Glyma.19G041000 hypothetical protein NA 1Chr19:5964641–5965947 (-)2.441e-11
Glyma.19G106200 hypothetical protein AT5G13890:AT5G13890:plant viral-response family protein (DUF716) 1Chr19:35710867–35712227 (+)4.248e-11
Glyma.20G107500 hypothetical protein AT2G16910:AMS:basic helix-loop-helix (bHLH) DNA-binding superfamily protein 1Chr20:35011922–35015196 (-)1.423e-11
Glyma.20G108700 hypothetical protein AT1G09290:AT1G09290:uncharacterized protein 1Chr20:35109869–35115132 (-)4.926e-11