Soybean mGWAS DBExplore The Genetic Basis Of Soybean Metabolism Glycine max
Overview Annotation GWAS Evidence Associated genes

P22661

Metabolite ID
P22661
Deionized mass
803.1914 Da
Average m/z
804.2047
Average RT
13.9201
Adduct
[M+H]+
Association scope
Overlapping genes only
Associated genes
65
GWAS result file
Available
Open in Soybean Metabolome Repository

Candidate annotations

Search compound candidates by deionized mass and tolerance. Follow compound IDs for database records, or use name searches to explore chemistry and soybean literature. About candidate annotations

GWAS Evidence

Dataset: indexed GWAS records.

Settings

SNP counts, plot highlights, gene associations and downloads use P < 10⁻¹⁰. Changing the threshold updates this page together.

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Associated genes

65 genes linked to SNP records with P < 10⁻¹⁰ in the selected scope. Supporting SNP records are counted per feature–gene pair.

Gene ID Alias Description Arabidopsis ortholog Supporting SNP recordsGene interval (1-based)Minimum P
Glyma.13G203300 hypothetical protein AT3G63530:BB:RING/U-box superfamily protein 3Chr13:31727841–31735910 (-)9.73e-14
Glyma.18G107900 hypothetical protein AT1G06490:CalS7:glucan synthase-like 7 3Chr18:12220182–12260477 (+)7.376e-12
Glyma.03G251100 hypothetical protein AT3G04490:AT3G04490:exportin-4 protein 2Chr03:44673965–44702804 (-)9.473e-11
Glyma.08G123500 hypothetical protein NA 2Chr08:9494946–9505931 (-)7.374e-11
Glyma.13G203200 hypothetical protein AT3G52105:AT3G52105:DIS3-exonuclease-like protein 2Chr13:31720004–31725252 (+)9.728e-14
Glyma.19G029600 hypothetical protein NA 2Chr19:3681517–3690884 (-)7.342e-11
Glyma.03G136000 hypothetical protein NA 1Chr03:35138670–35188160 (-)6.514e-11
Glyma.04G084200 hypothetical protein AT2G25830:AT2G25830:YebC-like protein 1Chr04:7137351–7146570 (-)1.911e-12
Glyma.04G084300 hypothetical protein AT2G25800:AT2G25800:elongation factor Ts (DUF810) 1Chr04:7153009–7158438 (+)4.576e-11
Glyma.04G084800 hypothetical protein AT5G11630:NOXY2:uncharacterized protein 1Chr04:7187985–7192897 (+)9.007e-11
Glyma.05G124700 hypothetical protein NA 1Chr05:31807311–31817648 (+)4.892e-12
Glyma.05G127300 hypothetical protein AT1G64520:RPN12a:regulatory particle non-ATPase 12A__AT5G42040:RPN12b:regulatory particle non-ATPase 12B 1Chr05:32021521–32025767 (-)1.55e-11
Glyma.05G127400 hypothetical protein AT1G29850:AT1G29850:double-stranded DNA-binding family protein 1Chr05:32030115–32033716 (+)1.55e-11
Glyma.05G127500 hypothetical protein NA 1Chr05:32041345–32049554 (+)3.962e-12
Glyma.05G127800 hypothetical protein AT4G18240:SS4:starch synthase 4 1Chr05:32125404–32138244 (+)1.286e-11
Glyma.05G127900 SAD1 AT5G48870:SAD1:Small nuclear ribonucleoprotein family protein 1Chr05:32139620–32141770 (-)1.286e-11
Glyma.05G128200 hypothetical protein AT5G46330:FLS2:Leucine-rich receptor-like protein kinase family protein 1Chr05:32158034–32162343 (-)1.286e-11
Glyma.05G220900 hypothetical protein NA 1Chr05:40040654–40043504 (+)9.2e-11
Glyma.05G224500 hypothetical protein NA 1Chr05:40342583–40345336 (+)3.776e-14
Glyma.05G224700 hypothetical protein NA 1Chr05:40351005–40361888 (+)1.622e-13
Glyma.05G226000 hypothetical protein AT5G19730:AT5G19730:Pectin lyase-like superfamily protein 1Chr05:40458098–40461736 (+)3.82e-17
Glyma.05G226400 hypothetical protein AT4G29140:ADS1:MATE efflux family protein 1Chr05:40480968–40482410 (-)5.6e-13
Glyma.05G236400 hypothetical protein AT1G23210:GH9B6:glycosyl hydrolase 9B6__AT1G70710:GH9B1:glycosyl hydrolase 9B1 1Chr05:41274513–41279615 (-)3.113e-13
Glyma.05G236700 hypothetical protein AT4G33760:AT4G33760:tRNA synthetase class II (D, K and N) family protein 1Chr05:41301540–41310727 (+)1.239e-19
Glyma.05G237800 hypothetical protein AT1G48790:AMSH1:associated molecule with the SH3 domain of STAM 1 1Chr05:41406807–41413022 (-)5.43e-15
Glyma.06G125200 hypothetical protein AT4G27940:MTM1:manganese tracking factor for mitochondrial SOD2 1Chr06:10209787–10215982 (+)4.835e-12
Glyma.06G125300 hypothetical protein AT5G24105:AGP41:arabinogalactan protein 41 1Chr06:10216506–10218901 (-)4.835e-12
Glyma.08G122200 hypothetical protein NA 1Chr08:9416766–9429995 (-)7.374e-11
Glyma.08G122300 hypothetical protein AT1G29390:COR314-TM2:cold regulated 314 thylakoid membrane 2 1Chr08:9435391–9437279 (+)7.374e-11
Glyma.08G122500 hypothetical protein NA 1Chr08:9441329–9445315 (-)7.374e-11
Glyma.08G122700 hypothetical protein AT1G29350:AT1G29350:RNA polymerase II degradation factor-like protein (DUF1296) 1Chr08:9452604–9458932 (+)7.374e-11
Glyma.08G211800 hypothetical protein NA 1Chr08:17104514–17105442 (-)8.9e-11
Glyma.10G078700 hypothetical protein NA 1Chr10:8882318–8903950 (+)1.029e-11
Glyma.10G079100 hypothetical protein NA 1Chr10:8960669–8962364 (-)1.029e-11
Glyma.10G079800 hypothetical protein NA 1Chr10:9223520–9228511 (-)1.029e-11
Glyma.10G080000 hypothetical protein AT3G11660:NHL1:NDR1/HIN1-like 1__AT3G52470:AT3G52470:Late embryosis abundant (LEA) hydroxyproline-rich glycoprotein fam… 1Chr10:9258476–9260697 (-)1.029e-11
Glyma.11G000700 hypothetical protein AT4G34150:AT4G34150:Calcium-dependent lipid-binding (CaLB domain) family protein 1Chr11:33497–35198 (+)9.233e-11
Glyma.13G197700 hypothetical protein AT5G38730:AT5G38730:Tetratricopeptide repeat (TPR)-like superfamily protein 1Chr13:31174654–31180595 (-)5.966e-11
Glyma.13G200600 hypothetical protein AT1G64830:AT1G64830:Eukaryotic aspartyl protease family protein 1Chr13:31428112–31429431 (-)3.303e-11
Glyma.13G201600 hypothetical protein NA 1Chr13:31521512–31522992 (+)6.374e-12
Glyma.13G203600 hypothetical protein AT5G13490:AAC2:ADP/ATP carrier 2 1Chr13:31753843–31756013 (-)2.466e-11
Glyma.13G203700 hypothetical protein NA 1Chr13:31780982–31784218 (+)9.729e-14
Glyma.13G203900 hypothetical protein NA 1Chr13:31793697–31796601 (-)4.542e-15
Glyma.13G204200 hypothetical protein NA 1Chr13:31822330–31826011 (+)5.694e-11
Glyma.14G077100 hypothetical protein AT5G42610:AT5G42610:calcium uniporter (DUF607) 1Chr14:6486139–6488935 (+)2.972e-11
Glyma.14G077200 hypothetical protein AT5G42620:AT5G42620:metalloendopeptidase / zinc ion binding protein 1Chr14:6498564–6506068 (+)2.972e-11
Glyma.14G077300 hypothetical protein AT1G75040:PR5:pathosis-related protein 5 1Chr14:6508609–6520744 (-)2.972e-11
Glyma.15G121100 hypothetical protein NA 1Chr15:9567797–9570248 (+)5.33e-11
Glyma.15G121500 hypothetical protein AT1G03370:AT1G03370:C2 calcium/lipid-binding and GRAM domain containing protein 1Chr15:9602794–9615281 (+)5.33e-11
Glyma.15G121800 hypothetical protein NA 1Chr15:9643746–9648073 (+)5.33e-11
Glyma.15G139000 hypothetical protein NA 1Chr15:11314329–11317181 (-)7.288e-12
Glyma.16G117400 hypothetical protein NA 1Chr16:26234552–26238233 (-)9.514e-12
Glyma.16G118100 hypothetical protein AT2G17570:cPT1:Undecaprenyl pyrophosphate synthetase family protein 1Chr16:26324650–26336836 (+)6.021e-12
Glyma.16G209000 hypothetical protein NA 1Chr16:36841786–36845498 (-)2.621e-11
Glyma.16G209300 hypothetical protein NA 1Chr16:36856833–36863994 (-)6.176e-11
Glyma.17G064000 hypothetical protein AT2G18840:AT2G18840:Integral membrane Yip1 family protein__AT4G30260:AT4G30260:Integral membrane Yip1 family protein 1Chr17:4924830–4930155 (-)7.098e-11
Glyma.17G064200 hypothetical protein AT5G57500:AT5G57500:Galactosyltransferase family protein 1Chr17:4943412–4944357 (-)7.098e-11
Glyma.17G189300 hypothetical protein NA 1Chr17:25644440–25649489 (-)9.935e-12
Glyma.18G045700 hypothetical protein NA 1Chr18:3956176–3958846 (+)2.344e-11
Glyma.18G108400 hypothetical protein NA 1Chr18:12370997–12390275 (-)8.487e-15
Glyma.18G298600 hypothetical protein AT1G44960:AT1G44960:SNARE associated Golgi protein family 1Chr18:57614292–57617223 (+)1.07e-12
Glyma.18G298800 hypothetical protein NA 1Chr18:57633577–57639546 (+)6.028e-12
Glyma.18G299100 hypothetical protein AT5G13420:TRA2:Aldolase-type TIM barrel family protein 1Chr18:57674222–57678396 (+)2.005e-11
Glyma.19G128200 hypothetical protein NA 1Chr19:38739769–38743404 (+)4.689e-12
Glyma.19G129500 hypothetical protein AT2G41160:AT2G41160:Ubiquitin-associated (UBA) protein 1Chr19:38884116–38901744 (-)3.239e-11