Soybean mGWAS DBExplore The Genetic Basis Of Soybean Metabolism Glycine max
Overview Annotation GWAS Evidence Associated genes

P22485

Metabolite ID
P22485
Deionized mass
593.8824 Da
Average m/z
594.8880
Average RT
13.8723
Adduct
[M+H]+
Association scope
Overlapping genes only
Associated genes
45
GWAS result file
Available
Open in Soybean Metabolome Repository

Candidate annotations

Search compound candidates by deionized mass and tolerance. Follow compound IDs for database records, or use name searches to explore chemistry and soybean literature. About candidate annotations

GWAS Evidence

Dataset: indexed GWAS records.

Settings

SNP counts, plot highlights, gene associations and downloads use P < 10⁻¹⁰. Changing the threshold updates this page together.

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Associated genes

45 genes linked to SNP records with P < 10⁻¹⁰ in the selected scope. Supporting SNP records are counted per feature–gene pair.

Gene ID Alias Description Arabidopsis ortholog Supporting SNP recordsGene interval (1-based)Minimum P
Glyma.06G305700 hypothetical protein AT2G05710:ACO3:aconitase 3 3Chr06:49451501–49461369 (-)5.052e-11
Glyma.09G277300 hypothetical protein NA 2Chr09:49271634–49276648 (-)3.388e-11
Glyma.12G202200 hypothetical protein AT2G20860:LIP1:lipoic acid synthase 1 2Chr12:36267599–36271584 (+)4.389e-17
Glyma.12G202400 hypothetical protein AT4G03415:PP2C52:Protein phosphatase 2C family protein 2Chr12:36289704–36295084 (-)2.442e-14
Glyma.14G093100 hypothetical protein NA 2Chr14:8654730–8655892 (-)6.92e-13
Glyma.01G010400 SLTI248 DEAD-box RNA helicase AT1G31970:STRS1:DEA(D/H)-box RNA helicase family protein 1Chr01:1009200–1013846 (+)8.817e-11
Glyma.01G175500 hypothetical protein AT3G50660:DWF4:Cytochrome P450 superfamily protein 1Chr01:51219681–51224948 (+)6.216e-11
Glyma.02G295900 hypothetical protein NA 1Chr02:47375932–47378006 (+)7.121e-13
Glyma.02G296200 hypothetical protein AT5G55390:EDM2:ENHANCED DOWNY MILDEW 2 1Chr02:47383044–47395946 (-)7.121e-13
Glyma.02G296300 hypothetical protein AT5G55400:AT5G55400:Actin binding Calponin homology (CH) domain-containing protein 1Chr02:47399263–47406220 (-)5.04e-12
Glyma.03G023000 hypothetical protein AT4G00220:JLO:Lateral organ boundaries (LOB) domain family protein 1Chr03:2423540–2428634 (-)1.34e-12
Glyma.05G029900 hypothetical protein AT5G62730:AT5G62730:Major facilitator superfamily protein 1Chr05:2565716–2569741 (-)5.693e-11
Glyma.05G034000 hypothetical protein AT4G03400:DFL2:Auxin-responsive GH3 family protein 1Chr05:2965889–2971412 (-)1.911e-12
Glyma.05G137500 hypothetical protein NA 1Chr05:33012282–33015297 (-)3.54e-11
Glyma.05G137600 hypothetical protein NA 1Chr05:33018107–33020120 (-)8.56e-11
Glyma.05G224700 hypothetical protein NA 1Chr05:40351005–40361888 (+)1.141e-11
Glyma.05G226000 hypothetical protein AT5G19730:AT5G19730:Pectin lyase-like superfamily protein 1Chr05:40458098–40461736 (+)2.304e-11
Glyma.06G019800 hypothetical protein NA 1Chr06:1494230–1501925 (+)2.886e-12
Glyma.06G184100 hypothetical protein NA 1Chr06:15897746–15902462 (+)5.855e-11
Glyma.06G305300 hypothetical protein NA 1Chr06:49431590–49435985 (-)5.052e-11
Glyma.06G305600 hypothetical protein NA 1Chr06:49446542–49450635 (-)5.052e-11
Glyma.09G058900 hypothetical protein NA 1Chr09:5397968–5404650 (-)1.151e-11
Glyma.09G080200 hypothetical protein NA 1Chr09:9256042–9263239 (-)3.602e-13
Glyma.09G082000 hypothetical protein NA 1Chr09:9638564–9650178 (+)1.078e-16
Glyma.09G084300 hypothetical protein AT2G34680:AIR9:Outer arm dynein light chain 1 protein 1Chr09:10129602–10197250 (-)2.949e-15
Glyma.09G280300 hypothetical protein AT2G38480:AT2G38480:Uncharacterized protein family (UPF0497) 1Chr09:49547489–49550731 (-)2.467e-12
Glyma.09G282900 hypothetical protein AT2G29090:CYP707A2:cytochrome P450, family 707, subfamily A, polypeptide 2 1Chr09:49863377–49871270 (+)2.117e-11
Glyma.10G028500 hypothetical protein NA 1Chr10:2476846–2478953 (+)2.768e-11
Glyma.10G028700 hypothetical protein AT1G03090:MCCA:methylcrotonyl-CoA carboxylase alpha chain 1Chr10:2485817–2497071 (-)2.768e-11
Glyma.12G183700 hypothetical protein AT2G27600:SKD1:AAA-type ATPase family protein 1Chr12:34470517–34477475 (-)3.55e-11
Glyma.12G202300 hypothetical protein NA 1Chr12:36275438–36276838 (+)4.389e-17
Glyma.12G203600 EXPB8 AT2G20750:EXPB1:expansin B1 1Chr12:36390283–36394245 (-)3.392e-12
Glyma.13G181100 hypothetical protein AT2G47960:AT2G47960:trafficking protein particle complex subunit-like protein 1Chr13:29426889–29433599 (-)5.349e-11
Glyma.14G094900 hypothetical protein AT1G60960:IRT3:iron regulated transporter 3 1Chr14:8824846–8827258 (-)4.534e-11
Glyma.15G121100 hypothetical protein NA 1Chr15:9567797–9570248 (+)4.041e-12
Glyma.15G121300 hypothetical protein AT5G47760:PGLP2:2-phosphoglycolate phosphatase 2 1Chr15:9584685–9590201 (-)1.876e-15
Glyma.15G121500 hypothetical protein AT1G03370:AT1G03370:C2 calcium/lipid-binding and GRAM domain containing protein 1Chr15:9602794–9615281 (+)4.041e-12
Glyma.15G121800 hypothetical protein NA 1Chr15:9643746–9648073 (+)4.041e-12
Glyma.15G124500 MLO-like protein 13 AT4G24250:MLO13:Seven transmembrane MLO family protein 1Chr15:9888761–9894068 (-)9.445e-11
Glyma.16G105100 hypothetical protein NA 1Chr16:21259552–21267517 (-)3.854e-11
Glyma.16G105400 hypothetical protein AT2G43040:NPG1:tetratricopeptide repeat (TPR)-containing protein 1Chr16:21357465–21364357 (-)2.757e-12
Glyma.16G113000 hypothetical protein NA 1Chr16:25112070–25116073 (+)1.3e-13
Glyma.16G179800 hypothetical protein AT5G52520:OVA6:Class II aaRS and biotin synthetases superfamily protein 1Chr16:34022480–34027055 (-)1.46e-11
Glyma.16G196200 HSF-32 heat stress transcription factor 32 AT5G62020:HSFB2A:heat shock transcription factor B2A 1Chr16:35760178–35761852 (+)5.723e-11
Glyma.18G242900 hypothetical protein NA 1Chr18:53113341–53119592 (-)2.959e-11