Soybean mGWAS DBExplore The Genetic Basis Of Soybean Metabolism Glycine max
Overview Annotation GWAS Evidence Associated genes

P22279

Metabolite ID
P22279
Deionized mass
278.1511 Da
Average m/z
279.1571
Average RT
13.8167
Adduct
[M+H]+
Association scope
Overlapping genes only
Associated genes
63
GWAS result file
Available
Open in Soybean Metabolome Repository

Candidate annotations

Search compound candidates by deionized mass and tolerance. Follow compound IDs for database records, or use name searches to explore chemistry and soybean literature. About candidate annotations

GWAS Evidence

Dataset: indexed GWAS records.

Settings

SNP counts, plot highlights, gene associations and downloads use P < 10⁻¹⁰. Changing the threshold updates this page together.

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Associated genes

63 genes linked to SNP records with P < 10⁻¹⁰ in the selected scope. Supporting SNP records are counted per feature–gene pair.

Gene ID Alias Description Arabidopsis ortholog Supporting SNP recordsGene interval (1-based)Minimum P
Glyma.16G209300 hypothetical protein NA 4Chr16:36856833–36863994 (-)3.622e-12
Glyma.06G305700 hypothetical protein AT2G05710:ACO3:aconitase 3 3Chr06:49451501–49461369 (-)7.07e-13
Glyma.08G117500 hypothetical protein AT4G18780:IRX1:cellulose synthase family protein 2Chr08:9065033–9071774 (-)1.505e-11
Glyma.08G123500 hypothetical protein NA 2Chr08:9494946–9505931 (-)1.179e-12
Glyma.09G274700 hypothetical protein NA 2Chr09:49057465–49065986 (-)3.458e-16
Glyma.09G275800 hypothetical protein NA 2Chr09:49116424–49122191 (-)3.458e-16
Glyma.09G276100 hypothetical protein AT2G38510:AT2G38510:MATE efflux family protein 2Chr09:49139110–49143810 (-)3.458e-16
Glyma.09G277300 hypothetical protein NA 2Chr09:49271634–49276648 (-)6.156e-13
Glyma.14G093100 hypothetical protein NA 2Chr14:8654730–8655892 (-)5.738e-11
Glyma.16G031600 hypothetical protein NA 2Chr16:2964569–2985013 (+)1.085e-15
Glyma.19G029600 hypothetical protein NA 2Chr19:3681517–3690884 (-)2.301e-11
Glyma.20G107200 hypothetical protein AT4G38540:AT4G38540:FAD/NAD(P)-binding oxidoreductase family protein 2Chr20:34984922–34988496 (+)1.017e-11
Glyma.01G120000 hypothetical protein NA 1Chr01:41270985–41274854 (+)4.812e-12
Glyma.01G121400 hypothetical protein AT5G01400:ESP4:HEAT repeat-containing protein 1Chr01:41808055–41828625 (-)5.986e-11
Glyma.01G168800 hypothetical protein AT1G24430:AT1G24430:HXXXD-type acyl-transferase family protein 1Chr01:50633986–50636589 (+)1.223e-12
Glyma.02G086900 hypothetical protein AT3G24130:AT3G24130:Pectin lyase-like superfamily protein 1Chr02:7553127–7557516 (-)1.742e-11
Glyma.04G063900 hypothetical protein NA 1Chr04:5310107–5313853 (+)7.793e-11
Glyma.04G234900 hypothetical protein AT5G53000:TAP46:2A phosphatase associated protein of 46 kD 1Chr04:50332008–50336222 (-)2.452e-13
Glyma.04G235400 hypothetical protein AT3G49260:iqd21:IQ-domain 21 1Chr04:50351726–50356449 (-)5.001e-11
Glyma.05G224200 hypothetical protein NA 1Chr05:40307329–40312025 (+)9.084e-12
Glyma.05G236700 hypothetical protein AT4G33760:AT4G33760:tRNA synthetase class II (D, K and N) family protein 1Chr05:41301540–41310727 (+)1.219e-11
Glyma.06G130300 hypothetical protein AT5G53080:AT5G53080:Tetratricopeptide repeat (TPR)-like superfamily protein 1Chr06:10709045–10716245 (-)1.025e-12
Glyma.06G130700 hypothetical protein AT5G53060:RCF3:RNA-binding KH domain-containing protein 1Chr06:10742110–10747597 (-)5.907e-12
Glyma.06G261900 hypothetical protein NA 1Chr06:44875369–44879702 (-)1.624e-11
Glyma.06G305300 hypothetical protein NA 1Chr06:49431590–49435985 (-)7.07e-13
Glyma.06G305600 hypothetical protein NA 1Chr06:49446542–49450635 (-)7.07e-13
Glyma.08G118400 hypothetical protein AT4G18810:AT4G18810:NAD(P)-binding Rossmann-fold superfamily protein 1Chr08:9147404–9153858 (-)1.505e-11
Glyma.08G119300 hypothetical protein AT1G29330:ERD2:ER lumen protein retaining receptor family protein 1Chr08:9198213–9201688 (-)8.562e-12
Glyma.08G122200 hypothetical protein NA 1Chr08:9416766–9429995 (-)1.179e-12
Glyma.08G122300 hypothetical protein AT1G29390:COR314-TM2:cold regulated 314 thylakoid membrane 2 1Chr08:9435391–9437279 (+)1.179e-12
Glyma.08G122500 hypothetical protein NA 1Chr08:9441329–9445315 (-)1.179e-12
Glyma.08G122700 hypothetical protein AT1G29350:AT1G29350:RNA polymerase II degradation factor-like protein (DUF1296) 1Chr08:9452604–9458932 (+)1.179e-12
Glyma.09G274900 hypothetical protein AT5G02280:AT5G02280:SNARE-like superfamily protein 1Chr09:49069946–49073277 (-)3.459e-16
Glyma.09G275100 hypothetical protein AT3G08760:ATSIK:Protein kinase superfamily protein 1Chr09:49079101–49084269 (-)3.459e-16
Glyma.09G275300 hypothetical protein NA 1Chr09:49094668–49096996 (-)3.459e-16
Glyma.09G275500 hypothetical protein NA 1Chr09:49105837–49106989 (+)2.158e-11
Glyma.09G275900 hypothetical protein AT5G01850:AT5G01850:Protein kinase superfamily protein 1Chr09:49128687–49133154 (-)3.459e-16
Glyma.09G276000 hypothetical protein NA 1Chr09:49131662–49132187 (+)3.459e-16
Glyma.09G276300 WNK10 AT3G51630:WNK5:with no lysine (K) kinase 5 1Chr09:49161113–49166087 (+)1.392e-15
Glyma.10G037300 hypothetical protein AT3G54670:TTN8:Structural maintenance of chromosomes (SMC) family protein 1Chr10:3270545–3283318 (-)1.227e-11
Glyma.10G213900 hypothetical protein AT2G35820:AT2G35820:ureidoglycolate hydrolase__AT2G35810:AT2G35810:ureidoglycolate hydrolase 1Chr10:44627193–44629900 (+)7.473e-13
Glyma.10G214200 hypothetical protein NA 1Chr10:44640345–44645298 (+)7.473e-13
Glyma.10G214700 hypothetical protein AT1G72000:A/N-InvF:Plant neutral invertase family protein__AT1G22650:A/N-InvD:Plant neutral invertase family protein__A… 1Chr10:44674211–44679550 (-)1.452e-14
Glyma.12G028800 hypothetical protein AT1G50300:TAF15:TBP-associated factor 15 1Chr12:2148313–2153234 (-)4.9e-11
Glyma.12G049300 hypothetical protein NA 1Chr12:3538428–3539170 (-)9.218e-12
Glyma.13G156000 hypothetical protein AT2G07560:HA6:H[+]-ATPase 6__AT3G42640:HA8:H[+]-ATPase 8 1Chr13:27104338–27109785 (+)3.505e-11
Glyma.14G204400 hypothetical protein AT2G30470:HSI2:B3 domain-containing transcription repressor VAL1 1Chr14:46936057–46943868 (-)4.603e-11
Glyma.15G124000 hypothetical protein NA 1Chr15:9845097–9849312 (-)8.004e-13
Glyma.16G020900 hypothetical protein NA 1Chr16:1932165–1935289 (-)5.2e-11
Glyma.16G105400 hypothetical protein AT2G43040:NPG1:tetratricopeptide repeat (TPR)-containing protein 1Chr16:21357465–21364357 (-)9.464e-11
Glyma.16G207900 hypothetical protein AT5G08450:AT5G08450:zinc finger CCCH domain protein 1Chr16:36754888–36763450 (+)1.45e-11
Glyma.16G208500 EIF6 AT3G55620:eIF6A:Translation initiation factor IF6 1Chr16:36806718–36809299 (+)1.782e-11
Glyma.17G251200 hypothetical protein NA 1Chr17:40605249–40607536 (+)8.095e-11
Glyma.20G027600 hypothetical protein NA 1Chr20:3140862–3142270 (+)9.995e-11
Glyma.20G084500 hypothetical protein AT2G33340:MAC3B:MOS4-associated complex 3B__AT1G04510:MAC3A:MOS4-associated complex 3A 1Chr20:31666190–31674959 (-)9.436e-11
Glyma.20G106900 hypothetical protein NA 1Chr20:34962043–34967985 (+)3.322e-11
Glyma.20G107900 hypothetical protein NA 1Chr20:35044042–35046452 (-)6.419e-11
Glyma.20G108000 hypothetical protein NA 1Chr20:35047833–35051623 (-)5.387e-11
Glyma.20G108900 hypothetical protein AT4G24175:AT4G24175:kinesin-like protein 1Chr20:35119868–35122488 (+)2.61e-12
Glyma.20G109600 hypothetical protein AT3G14290:PAE2:20S proteasome alpha subunit E2__AT1G53850:PAE1:20S proteasome alpha subunit E1 1Chr20:35200934–35205885 (-)3.067e-12
Glyma.20G109800 hypothetical protein AT2G35130:AT2G35130:Tetratricopeptide repeat (TPR)-like superfamily protein 1Chr20:35213258–35219502 (+)6.398e-17
Glyma.20G110000 hypothetical protein AT3G54260:TBL36:TRICHOME BIREFRINGENCE-LIKE 36 1Chr20:35229423–35231861 (+)1.38e-13
Glyma.20G217100 hypothetical protein AT1G64640:ENODL8:early nodulin-like protein 8 1Chr20:45278452–45280126 (-)4.303e-11