Soybean mGWAS DBExplore The Genetic Basis Of Soybean Metabolism Glycine max
Overview Annotation GWAS Evidence Associated genes

P22203

Metabolite ID
P22203
Deionized mass
1158.3466 Da
Average m/z
1159.3521
Average RT
13.7985
Adduct
[M+H]+
Association scope
Overlapping genes only
Associated genes
96
GWAS result file
Available
Open in Soybean Metabolome Repository

Candidate annotations

Search compound candidates by deionized mass and tolerance. Follow compound IDs for database records, or use name searches to explore chemistry and soybean literature. About candidate annotations

GWAS Evidence

Dataset: indexed GWAS records.

Settings

SNP counts, plot highlights, gene associations and downloads use P < 10⁻¹⁰. Changing the threshold updates this page together.

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Associated genes

96 genes linked to SNP records with P < 10⁻¹⁰ in the selected scope. Supporting SNP records are counted per feature–gene pair.

Gene ID Alias Description Arabidopsis ortholog Supporting SNP recordsGene interval (1-based)Minimum P
Glyma.19G011800 hypothetical protein AT3G01420:DOX1:Peroxidase superfamily protein 4Chr19:1134716–1143232 (+)2.348e-17
Glyma.06G201700 hypothetical protein NA 3Chr06:18577883–18617874 (+)8.769e-13
Glyma.06G305700 hypothetical protein AT2G05710:ACO3:aconitase 3 3Chr06:49451501–49461369 (-)3.077e-12
Glyma.16G147900 hypothetical protein NA 3Chr16:30864919–30872425 (+)1.583e-12
Glyma.06G313500 hypothetical protein NA 2Chr06:50191600–50203098 (-)9.507e-14
Glyma.06G315100 hypothetical protein AT5G04930:ALA1:aminophospholipid ATPase 1 2Chr06:50401945–50408153 (+)9.359e-15
Glyma.13G135700 hypothetical protein NA 2Chr13:24812720–24818735 (+)8.654e-12
Glyma.13G135800 hypothetical protein AT5G02800:CDL1:Protein kinase superfamily protein 2Chr13:24820151–24823999 (-)8.654e-12
Glyma.14G093100 hypothetical protein NA 2Chr14:8654730–8655892 (-)5.406e-11
Glyma.19G011700 hypothetical protein AT3G01420:DOX1:Peroxidase superfamily protein 2Chr19:1123637–1130946 (+)1.973e-19
Glyma.19G011900 hypothetical protein AT3G28140:AT3G28140:RNA ligase/cyclic nucleotide phosphodiesterase family protein__AT5G40190:AT5G40190:RNA ligase/cycli… 2Chr19:1148510–1149495 (+)9.012e-15
Glyma.19G012100 hypothetical protein AT3G28150:TBL22:TRICHOME BIREFRINGENCE-LIKE 22 2Chr19:1155711–1161298 (-)7.761e-22
Glyma.19G012300 hypothetical protein NA 2Chr19:1165111–1173031 (-)7.761e-22
Glyma.01G096700 hypothetical protein NA 1Chr01:31374967–31380201 (+)9.096e-11
Glyma.01G120000 hypothetical protein NA 1Chr01:41270985–41274854 (+)5.719e-12
Glyma.01G123900 hypothetical protein AT3G51770:ETO1:tetratricopeptide repeat (TPR)-containing protein 1Chr01:42831758–42837350 (+)2.862e-11
Glyma.01G168800 hypothetical protein AT1G24430:AT1G24430:HXXXD-type acyl-transferase family protein 1Chr01:50633986–50636589 (+)2.799e-11
Glyma.01G169700 hypothetical protein AT4G36410:UBC17:ubiquitin-conjugating enzyme 17 1Chr01:50715084–50719427 (-)3.227e-13
Glyma.01G169800 hypothetical protein AT4G36400:D2HGDH:FAD-linked oxidases family protein 1Chr01:50726088–50733347 (-)3.227e-13
Glyma.02G086900 hypothetical protein AT3G24130:AT3G24130:Pectin lyase-like superfamily protein 1Chr02:7553127–7557516 (-)3.031e-15
Glyma.03G001500 B15-3-5 AT2G38600:AT2G38600:HAD superfamily, subfamily IIIB acid phosphatase 1Chr03:169480–172727 (+)4.628e-12
Glyma.03G022100 hypothetical protein AT4G32430:AT4G32430:Pentatricopeptide repeat (PPR) superfamily protein 1Chr03:2301675–2307263 (+)9.883e-12
Glyma.03G023000 hypothetical protein AT4G00220:JLO:Lateral organ boundaries (LOB) domain family protein 1Chr03:2423540–2428634 (-)1.186e-11
Glyma.03G031700 hypothetical protein AT1G79600:AT1G79600:Protein kinase superfamily protein 1Chr03:3567906–3572939 (-)1.606e-12
Glyma.05G112300 hypothetical protein NA 1Chr05:29852015–29852896 (-)8.637e-11
Glyma.05G124700 hypothetical protein NA 1Chr05:31807311–31817648 (+)2.828e-13
Glyma.05G126400 hypothetical protein NA 1Chr05:31961493–31968339 (+)1.261e-12
Glyma.05G127200 hypothetical protein AT1G29790:AT1G29790:S-adenosyl-L-methionine-dependent methyltransferases superfamily protein 1Chr05:32014213–32017922 (-)4.22e-13
Glyma.05G127300 hypothetical protein AT1G64520:RPN12a:regulatory particle non-ATPase 12A__AT5G42040:RPN12b:regulatory particle non-ATPase 12B 1Chr05:32021521–32025767 (-)1.213e-12
Glyma.05G127400 hypothetical protein AT1G29850:AT1G29850:double-stranded DNA-binding family protein 1Chr05:32030115–32033716 (+)1.213e-12
Glyma.05G127500 hypothetical protein NA 1Chr05:32041345–32049554 (+)5.127e-13
Glyma.05G127800 hypothetical protein AT4G18240:SS4:starch synthase 4 1Chr05:32125404–32138244 (+)3.686e-12
Glyma.05G127900 SAD1 AT5G48870:SAD1:Small nuclear ribonucleoprotein family protein 1Chr05:32139620–32141770 (-)3.686e-12
Glyma.05G128200 hypothetical protein AT5G46330:FLS2:Leucine-rich receptor-like protein kinase family protein 1Chr05:32158034–32162343 (-)3.686e-12
Glyma.05G236400 hypothetical protein AT1G23210:GH9B6:glycosyl hydrolase 9B6__AT1G70710:GH9B1:glycosyl hydrolase 9B1 1Chr05:41274513–41279615 (-)1.885e-12
Glyma.05G236700 hypothetical protein AT4G33760:AT4G33760:tRNA synthetase class II (D, K and N) family protein 1Chr05:41301540–41310727 (+)9.515e-14
Glyma.06G084800 hypothetical protein NA 1Chr06:6515571–6517480 (-)3.629e-12
Glyma.06G085000 hypothetical protein NA 1Chr06:6524339–6529016 (-)3.629e-12
Glyma.06G085100 hypothetical protein NA 1Chr06:6531956–6537295 (-)3.629e-12
Glyma.06G085200 hypothetical protein NA 1Chr06:6540849–6545557 (+)2.432e-12
Glyma.06G261900 hypothetical protein NA 1Chr06:44875369–44879702 (-)5.069e-18
Glyma.06G305200 hypothetical protein AT3G21690:AT3G21690:MATE efflux family protein 1Chr06:49420013–49426780 (-)9.806e-11
Glyma.06G305300 hypothetical protein NA 1Chr06:49431590–49435985 (-)3.077e-12
Glyma.06G305600 hypothetical protein NA 1Chr06:49446542–49450635 (-)3.077e-12
Glyma.06G316500 hypothetical protein AT2G47420:DIM1A:Ribosomal RNA adenine dimethylase family protein 1Chr06:50531222–50538652 (-)2.679e-15
Glyma.06G317100 hypothetical protein AT5G61520:AT5G61520:Major facilitator superfamily protein 1Chr06:50586679–50589765 (+)5.043e-13
Glyma.06G320000 hypothetical protein AT1G05740:AT1G05740:FAM136A-like protein (DUF842) 1Chr06:50870241–50873816 (+)2.261e-11
Glyma.06G320100 hypothetical protein AT5G56290:PEX5:peroxin 5 1Chr06:50874167–50888925 (-)2.261e-11
Glyma.07G071000 hypothetical protein AT4G00480:ATMYC1:basic helix-loop-helix (bHLH) DNA-binding superfamily protein 1Chr07:6464646–6470484 (+)5.507e-12
Glyma.07G129600 hypothetical protein AT4G29670:ACHT2:atypical CYS HIS rich thioredoxin 2 1Chr07:15404178–15410144 (-)3.175e-11
Glyma.09G080200 hypothetical protein NA 1Chr09:9256042–9263239 (-)7.321e-14
Glyma.09G082000 hypothetical protein NA 1Chr09:9638564–9650178 (+)5.895e-16
Glyma.09G084300 hypothetical protein AT2G34680:AIR9:Outer arm dynein light chain 1 protein 1Chr09:10129602–10197250 (-)4.569e-14
Glyma.09G238200 NIP2-1 putative Si transporter NIP2-1 NA 1Chr09:46029192–46034136 (+)9.043e-12
Glyma.09G246700 hypothetical protein AT1G22840:CYTC-1:CYTOCHROME C-1 1Chr09:46835469–46838091 (-)1.093e-11
Glyma.09G252100 hypothetical protein AT1G79790:FHY1:Haloacid dehalogenase-like hydrolase (HAD) superfamily protein 1Chr09:47245185–47248478 (+)1.618e-12
Glyma.09G253800 hypothetical protein NA 1Chr09:47356240–47357763 (-)2.995e-11
Glyma.09G253900 hypothetical protein NA 1Chr09:47359742–47364806 (-)2.995e-11
Glyma.09G270500 hypothetical protein AT1G09780:iPGAM1:Phosphoglycerate mutase, 2,3-bisphosphoglycerate-independent 1Chr09:48745649–48751140 (+)4.527e-11
Glyma.10G263800 hypothetical protein AT1G23010:LPR1:Cupredoxin superfamily protein 1Chr10:48805999–48811533 (-)6.549e-12
Glyma.10G265400 hypothetical protein AT2G01290:RPI2: 1Chr10:48921268–48922795 (+)3.687e-12
Glyma.12G028800 hypothetical protein AT1G50300:TAF15:TBP-associated factor 15 1Chr12:2148313–2153234 (-)1.626e-11
Glyma.12G049300 hypothetical protein NA 1Chr12:3538428–3539170 (-)1.169e-13
Glyma.12G108600 hypothetical protein NA 1Chr12:9994609–9997302 (-)3.038e-12
Glyma.12G109500 hypothetical protein AT4G03415:PP2C52:Protein phosphatase 2C family protein 1Chr12:10308026–10314332 (-)3.038e-12
Glyma.12G114500 hypothetical protein AT4G22930:PYR4:pyrimidin 4 1Chr12:11396572–11400825 (-)3.175e-12
Glyma.12G114900 hypothetical protein NA 1Chr12:11457987–11462951 (-)3.175e-12
Glyma.12G202200 hypothetical protein AT2G20860:LIP1:lipoic acid synthase 1 1Chr12:36267599–36271584 (+)2.483e-11
Glyma.12G202300 hypothetical protein NA 1Chr12:36275438–36276838 (+)2.483e-11
Glyma.12G202400 hypothetical protein AT4G03415:PP2C52:Protein phosphatase 2C family protein 1Chr12:36289704–36295084 (-)3.977e-11
Glyma.13G135300 hypothetical protein NA 1Chr13:24770681–24773826 (+)2.189e-11
Glyma.13G135400 hypothetical protein AT5G12130:PDE149:integral membrane TerC family protein 1Chr13:24786242–24791938 (+)2.189e-11
Glyma.13G135500 hypothetical protein AT5G02780:GSTL1:glutathione transferase lambda 1 1Chr13:24798567–24801567 (+)8.654e-12
Glyma.13G203900 hypothetical protein NA 1Chr13:31793697–31796601 (-)9.057e-11
Glyma.14G066800 hypothetical protein NA 1Chr14:5511222–5513114 (+)9.483e-18
Glyma.14G067800 hypothetical protein AT3G12380:ARP5:actin-related protein 5 1Chr14:5675792–5680343 (+)6.549e-11
Glyma.15G124000 hypothetical protein NA 1Chr15:9845097–9849312 (-)1.782e-13
Glyma.15G124500 MLO-like protein 13 AT4G24250:MLO13:Seven transmembrane MLO family protein 1Chr15:9888761–9894068 (-)2.525e-11
Glyma.16G031600 hypothetical protein NA 1Chr16:2964569–2985013 (+)9.352e-11
Glyma.16G050500 AFB3B auxin signaling F-box 3 protein AT3G26810:AFB2:auxin signaling F-box 2 1Chr16:4853237–4856710 (+)1.945e-13
Glyma.16G050900 COL16 NA 1Chr16:4874634–4878624 (+)1.877e-12
Glyma.16G051100 hypothetical protein NA 1Chr16:4896279–4898219 (-)1.074e-12
Glyma.16G139500 hypothetical protein AT5G66550:AT5G66550:Maf-like protein 1Chr16:29686243–29690410 (-)1.698e-11
Glyma.16G160900 hypothetical protein NA 1Chr16:32013447–32016235 (+)6.176e-11
Glyma.16G161500 hypothetical protein NA 1Chr16:32076715–32092322 (-)6.018e-11
Glyma.16G208500 EIF6 AT3G55620:eIF6A:Translation initiation factor IF6 1Chr16:36806718–36809299 (+)6.938e-12
Glyma.16G209300 hypothetical protein NA 1Chr16:36856833–36863994 (-)6.567e-13
Glyma.16G209400 hypothetical protein AT1G17840:ABCG11:white-brown complex-like protein 1Chr16:36871978–36878151 (-)8.813e-12
Glyma.17G251200 hypothetical protein NA 1Chr17:40605249–40607536 (+)2.016e-11
Glyma.17G258400 hypothetical protein AT1G30755:AT1G30755:elongation factor G, putative (DUF668) 1Chr17:41248979–41254225 (+)4.054e-11
Glyma.17G258700 hypothetical protein AT4G24190:SHD:Chaperone protein htpG family protein 1Chr17:41280124–41284980 (-)2.916e-13
Glyma.18G099700 hypothetical protein AT5G54860:AT5G54860:Major facilitator superfamily protein 1Chr18:10459970–10464888 (-)9.472e-13
Glyma.19G011600 hypothetical protein NA 1Chr19:1111789–1116419 (+)1.973e-19
Glyma.19G128200 hypothetical protein NA 1Chr19:38739769–38743404 (+)1.961e-12
Glyma.20G109800 hypothetical protein AT2G35130:AT2G35130:Tetratricopeptide repeat (TPR)-like superfamily protein 1Chr20:35213258–35219502 (+)6.502e-11
Glyma.20G112900 hypothetical protein AT2G39210:AT2G39210:Major facilitator superfamily protein 1Chr20:35498179–35500565 (-)6.367e-11