Soybean mGWAS DBExplore The Genetic Basis Of Soybean Metabolism Glycine max
Overview Annotation GWAS Evidence Associated genes

P22110

Metabolite ID
P22110
Deionized mass
374.0846 Da
Average m/z
375.0907
Average RT
13.7737
Adduct
[M+H]+
Association scope
Overlapping genes only
Associated genes
114
GWAS result file
Available
Open in Soybean Metabolome Repository

Candidate annotations

Search compound candidates by deionized mass and tolerance. Follow compound IDs for database records, or use name searches to explore chemistry and soybean literature. About candidate annotations

GWAS Evidence

Dataset: indexed GWAS records.

Settings

SNP counts, plot highlights, gene associations and downloads use P < 10⁻¹⁰. Changing the threshold updates this page together.

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Associated genes

114 genes linked to SNP records with P < 10⁻¹⁰ in the selected scope. Supporting SNP records are counted per feature–gene pair.

Gene ID Alias Description Arabidopsis ortholog Supporting SNP recordsGene interval (1-based)Minimum P
Glyma.04G096800 hypothetical protein AT4G24460:CLT2:CRT (chloroquine-resistance transporter)-like transporter 2 4Chr04:8747857–8778229 (-)4.825e-11
Glyma.06G183500 hypothetical protein AT5G50000:AT5G50000:Protein kinase superfamily protein 3Chr06:15828917–15834067 (+)2.465e-16
Glyma.01G166400 hypothetical protein AT4G36080:AT4G36080:phosphotransferases/inositol or phosphatidylinositol kinase 2Chr01:50404781–50436297 (-)3.431e-11
Glyma.11G086500 hypothetical protein AT2G17530:AT2G17530:Protein kinase superfamily protein__AT4G35500:AT4G35500:Protein kinase superfamily protein 2Chr11:6505886–6510196 (-)8.316e-11
Glyma.13G135700 hypothetical protein NA 2Chr13:24812720–24818735 (+)3.682e-16
Glyma.13G135800 hypothetical protein AT5G02800:CDL1:Protein kinase superfamily protein 2Chr13:24820151–24823999 (-)3.682e-16
Glyma.16G031600 hypothetical protein NA 2Chr16:2964569–2985013 (+)4.562e-11
Glyma.16G118100 hypothetical protein AT2G17570:cPT1:Undecaprenyl pyrophosphate synthetase family protein 2Chr16:26324650–26336836 (+)1.955e-12
Glyma.16G196900 hypothetical protein NA 2Chr16:35841279–35846894 (-)2.608e-11
Glyma.19G029600 hypothetical protein NA 2Chr19:3681517–3690884 (-)9.601e-12
Glyma.01G123900 hypothetical protein AT3G51770:ETO1:tetratricopeptide repeat (TPR)-containing protein 1Chr01:42831758–42837350 (+)3.307e-12
Glyma.01G124100 hypothetical protein NA 1Chr01:42886229–42892204 (-)5.088e-12
Glyma.01G128100 hypothetical protein NA 1Chr01:44021618–44025300 (-)5.346e-11
Glyma.01G166300 hypothetical protein AT3G51230:AT3G51230:chalcone-flavanone isomerase family protein 1Chr01:50402188–50404181 (+)3.431e-11
Glyma.01G166600 hypothetical protein AT2G18000:TAF14:TBP-associated factor 14 1Chr01:50443699–50446896 (-)3.431e-11
Glyma.01G169700 hypothetical protein AT4G36410:UBC17:ubiquitin-conjugating enzyme 17 1Chr01:50715084–50719427 (-)2.593e-12
Glyma.01G169800 hypothetical protein AT4G36400:D2HGDH:FAD-linked oxidases family protein 1Chr01:50726088–50733347 (-)2.593e-12
Glyma.02G133800 hypothetical protein AT1G49660:CXE5:carboxyesterase 5 1Chr02:13850366–13851962 (-)8.818e-11
Glyma.03G022100 hypothetical protein AT4G32430:AT4G32430:Pentatricopeptide repeat (PPR) superfamily protein 1Chr03:2301675–2307263 (+)6.845e-11
Glyma.03G023000 hypothetical protein AT4G00220:JLO:Lateral organ boundaries (LOB) domain family protein 1Chr03:2423540–2428634 (-)1.022e-14
Glyma.03G040600 hypothetical protein AT2G38400:AGT3:alanine:glyoxylate aminotransferase 3 1Chr03:5113019–5121557 (+)1.592e-13
Glyma.03G177700 hypothetical protein NA 1Chr03:39046772–39051158 (+)6.267e-12
Glyma.04G096500 hypothetical protein NA 1Chr04:8664088–8675605 (+)4.825e-11
Glyma.04G096600 hypothetical protein AT1G58250:SAB:HYPERSENSITIVE TO PI STARVATION 4 1Chr04:8693806–8724007 (-)4.825e-11
Glyma.04G096900 hypothetical protein NA 1Chr04:8778953–8796458 (-)4.825e-11
Glyma.04G098400 hypothetical protein AT1G22490:AT1G22490:basic helix-loop-helix (bHLH) DNA-binding superfamily protein__AT1G72210:AT1G72210:basic helix-loop… 1Chr04:8914410–8916406 (+)8.99e-11
Glyma.04G104400 hypothetical protein NA 1Chr04:9885009–9889282 (+)7.609e-11
Glyma.05G034000 hypothetical protein AT4G03400:DFL2:Auxin-responsive GH3 family protein 1Chr05:2965889–2971412 (-)5.447e-11
Glyma.05G124700 hypothetical protein NA 1Chr05:31807311–31817648 (+)6.074e-11
Glyma.05G127500 hypothetical protein NA 1Chr05:32041345–32049554 (+)7.912e-11
Glyma.05G224700 hypothetical protein NA 1Chr05:40351005–40361888 (+)2.966e-11
Glyma.05G226000 hypothetical protein AT5G19730:AT5G19730:Pectin lyase-like superfamily protein 1Chr05:40458098–40461736 (+)2.478e-11
Glyma.05G236400 hypothetical protein AT1G23210:GH9B6:glycosyl hydrolase 9B6__AT1G70710:GH9B1:glycosyl hydrolase 9B1 1Chr05:41274513–41279615 (-)3.294e-14
Glyma.05G236700 hypothetical protein AT4G33760:AT4G33760:tRNA synthetase class II (D, K and N) family protein 1Chr05:41301540–41310727 (+)6.665e-16
Glyma.05G237800 hypothetical protein AT1G48790:AMSH1:associated molecule with the SH3 domain of STAM 1 1Chr05:41406807–41413022 (-)5.317e-13
Glyma.06G085200 hypothetical protein NA 1Chr06:6540849–6545557 (+)8.33e-11
Glyma.06G313500 hypothetical protein NA 1Chr06:50191600–50203098 (-)4.488e-13
Glyma.07G013400 hypothetical protein AT3G21310:AT3G21310:Core-2/I-branching beta-1,6-N-acetylglucosaminyltransferase family protein 1Chr07:1028243–1033837 (-)2.589e-11
Glyma.07G013500 hypothetical protein NA 1Chr07:1036819–1041984 (-)2.589e-11
Glyma.07G021100 hypothetical protein NA 1Chr07:1647678–1650627 (+)1.399e-11
Glyma.07G021600 hypothetical protein AT5G48930:HCT:hydroxycinnamoyl-CoA shikimate/quinate hydroxycinnamoyl transferase 1Chr07:1673827–1680014 (-)1.399e-11
Glyma.07G021700 hypothetical protein NA 1Chr07:1684537–1692320 (+)2.913e-12
Glyma.07G021800 hypothetical protein AT1G80920:J8:Chaperone DnaJ-domain superfamily protein 1Chr07:1697119–1698666 (+)2.459e-12
Glyma.07G034300 hypothetical protein NA 1Chr07:2701469–2717662 (-)9.072e-11
Glyma.08G149500 hypothetical protein NA 1Chr08:11460264–11465243 (-)7.434e-11
Glyma.08G338900 hypothetical protein NA 1Chr08:45536950–45543029 (-)6.674e-12
Glyma.10G028500 hypothetical protein NA 1Chr10:2476846–2478953 (+)2.536e-13
Glyma.10G028700 hypothetical protein AT1G03090:MCCA:methylcrotonyl-CoA carboxylase alpha chain 1Chr10:2485817–2497071 (-)2.536e-13
Glyma.11G000700 hypothetical protein AT4G34150:AT4G34150:Calcium-dependent lipid-binding (CaLB domain) family protein 1Chr11:33497–35198 (+)4.915e-12
Glyma.11G024800 hypothetical protein NA 1Chr11:1754343–1759398 (+)6.402e-11
Glyma.11G037100 hypothetical protein AT2G35660:CTF2A:FAD/NAD(P)-binding oxidoreductase family protein 1Chr11:2678678–2681764 (-)6.784e-12
Glyma.11G048300 hypothetical protein AT4G37640:ACA2:calcium ATPase 2 1Chr11:3601241–3607177 (+)2.326e-12
Glyma.11G049700 hypothetical protein NA 1Chr11:3731308–3734534 (+)2.735e-12
Glyma.11G050300 hypothetical protein AT2G23093:AT2G23093:Major facilitator superfamily protein 1Chr11:3765453–3771565 (+)7.52e-12
Glyma.11G050500 hypothetical protein AT5G67370:CGLD27:DUF1230 family protein (DUF1230) 1Chr11:3778152–3782174 (+)7.52e-12
Glyma.11G050600 hypothetical protein NA 1Chr11:3779988–3786583 (-)7.52e-12
Glyma.11G051600 hypothetical protein NA 1Chr11:3857225–3859564 (-)7.52e-12
Glyma.11G086100 hypothetical protein NA 1Chr11:6481228–6484662 (+)8.316e-11
Glyma.11G086300 hypothetical protein AT4G35520:MLH3:MUTL protein homolog 3 1Chr11:6487310–6496559 (-)8.316e-11
Glyma.11G095100 hypothetical protein NA 1Chr11:7212438–7214276 (-)1.066e-11
Glyma.11G127100 hypothetical protein AT1G06040:STO:B-box zinc finger family protein 1Chr11:9656242–9659517 (+)6.298e-12
Glyma.11G127200 hypothetical protein AT3G59480:AT3G59480:pfkB-like carbohydrate kinase family protein 1Chr11:9660434–9665570 (-)6.298e-12
Glyma.11G127300 hypothetical protein AT2G28480:AT2G28480:RNA-binding CRS1 / YhbY (CRM) domain protein 1Chr11:9667918–9671917 (-)6.298e-12
Glyma.12G114500 hypothetical protein AT4G22930:PYR4:pyrimidin 4 1Chr12:11396572–11400825 (-)6.447e-11
Glyma.12G114900 hypothetical protein NA 1Chr12:11457987–11462951 (-)6.447e-11
Glyma.12G202200 hypothetical protein AT2G20860:LIP1:lipoic acid synthase 1 1Chr12:36267599–36271584 (+)9.735e-15
Glyma.12G202300 hypothetical protein NA 1Chr12:36275438–36276838 (+)9.735e-15
Glyma.12G202400 hypothetical protein AT4G03415:PP2C52:Protein phosphatase 2C family protein 1Chr12:36289704–36295084 (-)1.163e-11
Glyma.13G135300 hypothetical protein NA 1Chr13:24770681–24773826 (+)2.625e-15
Glyma.13G135400 hypothetical protein AT5G12130:PDE149:integral membrane TerC family protein 1Chr13:24786242–24791938 (+)2.624e-15
Glyma.13G135500 hypothetical protein AT5G02780:GSTL1:glutathione transferase lambda 1 1Chr13:24798567–24801567 (+)3.682e-16
Glyma.13G156000 hypothetical protein AT2G07560:HA6:H[+]-ATPase 6__AT3G42640:HA8:H[+]-ATPase 8 1Chr13:27104338–27109785 (+)5.235e-11
Glyma.13G200600 hypothetical protein AT1G64830:AT1G64830:Eukaryotic aspartyl protease family protein 1Chr13:31428112–31429431 (-)1.352e-11
Glyma.13G201600 hypothetical protein NA 1Chr13:31521512–31522992 (+)1.45e-11
Glyma.14G069500 hypothetical protein AT5G37810:NIP4;1:NOD26-like intrinsic protein 4;1 1Chr14:5822246–5825628 (-)9.272e-13
Glyma.14G093100 hypothetical protein NA 1Chr14:8654730–8655892 (-)5.434e-11
Glyma.14G213400 hypothetical protein NA 1Chr14:47844823–47847028 (+)8.503e-11
Glyma.15G035600 hypothetical protein AT3G46740:TOC75-III:translocon at the outer envelope membrane of chloroplasts 75-III 1Chr15:2830678–2835534 (+)1.517e-11
Glyma.15G037400 hypothetical protein AT5G59420:ORP3C:OSBP(oxysterol binding protein)-related protein 3C 1Chr15:2950291–2955686 (-)8.586e-11
Glyma.15G037600 hypothetical protein AT2G29050:RBL1:RHOMBOID-like 1 1Chr15:2964304–2967785 (+)3.312e-11
Glyma.15G121100 hypothetical protein NA 1Chr15:9567797–9570248 (+)1.814e-13
Glyma.15G121300 hypothetical protein AT5G47760:PGLP2:2-phosphoglycolate phosphatase 2 1Chr15:9584685–9590201 (-)2.723e-13
Glyma.15G121500 hypothetical protein AT1G03370:AT1G03370:C2 calcium/lipid-binding and GRAM domain containing protein 1Chr15:9602794–9615281 (+)1.814e-13
Glyma.15G121800 hypothetical protein NA 1Chr15:9643746–9648073 (+)1.814e-13
Glyma.15G124000 hypothetical protein NA 1Chr15:9845097–9849312 (-)2.045e-12
Glyma.15G124500 MLO-like protein 13 AT4G24250:MLO13:Seven transmembrane MLO family protein 1Chr15:9888761–9894068 (-)1.486e-13
Glyma.15G139000 hypothetical protein NA 1Chr15:11314329–11317181 (-)1.04e-12
Glyma.16G003000 hypothetical protein AT1G58025:AT1G58025:DNA-binding bromodomain-containing protein 1Chr16:164584–168767 (+)1.871e-12
Glyma.16G003200 hypothetical protein NA 1Chr16:172940–178668 (-)1.871e-12
Glyma.16G003600 hypothetical protein AT5G49945:AT5G49945: 1Chr16:198072–202486 (-)5.336e-12
Glyma.16G025300 hypothetical protein NA 1Chr16:2438122–2440528 (-)1.378e-12
Glyma.16G025400 hypothetical protein AT2G46430:CNGC3:cyclic nucleotide gated channel 3 1Chr16:2443212–2450834 (-)1.378e-12
Glyma.16G050500 AFB3B auxin signaling F-box 3 protein AT3G26810:AFB2:auxin signaling F-box 2 1Chr16:4853237–4856710 (+)1.135e-11
Glyma.16G115400 hypothetical protein NA 1Chr16:25604547–25606360 (+)8.929e-11
Glyma.16G115500 hypothetical protein NA 1Chr16:25622503–25630816 (+)8.929e-11
Glyma.16G117400 hypothetical protein NA 1Chr16:26234552–26238233 (-)1.394e-12
Glyma.16G119300 hypothetical protein NA 1Chr16:26643902–26644416 (+)6.114e-11
Glyma.16G119400 hypothetical protein NA 1Chr16:26684278–26687087 (+)1.297e-12
Glyma.16G196200 HSF-32 heat stress transcription factor 32 AT5G62020:HSFB2A:heat shock transcription factor B2A 1Chr16:35760178–35761852 (+)7.847e-11
Glyma.17G215500 KNAT5 NA 1Chr17:36212363–36217688 (-)4.691e-11
Glyma.18G251900 hypothetical protein AT3G60320:AT3G60320:bZIP domain class transcription factor (DUF630 and DUF632)__AT1G02110:AT1G02110:bZIP domain class t… 1Chr18:53855786–53862322 (-)1.254e-13
Glyma.18G252000 hypothetical protein AT1G02100:SBI1:Leucine carboxyl methyltransferase 1Chr18:53874840–53885068 (-)4.88e-11
Glyma.18G266500 hypothetical protein NA 1Chr18:55088284–55091427 (-)2.881e-11
Glyma.18G298600 hypothetical protein AT1G44960:AT1G44960:SNARE associated Golgi protein family 1Chr18:57614292–57617223 (+)2.883e-12
Glyma.18G298800 hypothetical protein NA 1Chr18:57633577–57639546 (+)2.883e-11
Glyma.18G299100 hypothetical protein AT5G13420:TRA2:Aldolase-type TIM barrel family protein 1Chr18:57674222–57678396 (+)3.362e-11
Glyma.18G299500 hypothetical protein AT2G43160:AT2G43160:ENTH/VHS family protein 1Chr18:57741567–57749794 (+)8.747e-11
Glyma.19G012100 hypothetical protein AT3G28150:TBL22:TRICHOME BIREFRINGENCE-LIKE 22 1Chr19:1155711–1161298 (-)4.294e-12
Glyma.19G012300 hypothetical protein NA 1Chr19:1165111–1173031 (-)4.294e-12
Glyma.19G128200 hypothetical protein NA 1Chr19:38739769–38743404 (+)9.224e-12
Glyma.20G019500 hypothetical protein AT1G21065:AT1G21065:secondary thiamine-phosphate synthase enzyme 1Chr20:2039210–2040459 (+)9.085e-13
Glyma.20G019700 hypothetical protein NA 1Chr20:2047020–2050862 (-)6.529e-12
Glyma.20G019800 hypothetical protein AT1G49350:AT1G49350:pfkB-like carbohydrate kinase family protein 1Chr20:2051817–2057262 (+)1.484e-16
Glyma.20G219100 hypothetical protein AT3G02830:ZFN1:zinc finger protein 1 1Chr20:45490419–45496014 (+)3.878e-11