Overview Annotation GWAS Evidence Associated genes

P21924

Metabolite ID
P21924
Deionized mass
1430.2203 Da
Average m/z
716.1186
Average RT
13.7331
Adduct
[M+2H]2+
Association scope
Overlapping genes only
Associated genes
14
GWAS result file
Available

Candidate annotations

Search compound candidates by deionized mass and tolerance. Follow compound IDs for database records, or use name searches to explore chemistry and soybean literature. About candidate annotations

GWAS Evidence

Dataset: indexed GWAS records.

Settings

SNP counts, plot highlights, gene associations and downloads use P < 10⁻¹⁰. Changing the threshold updates this page together.

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This Q–Q plot describes the indexed records. For downsampled files, it does not represent the distribution across all tested variants. Data coverage

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Associated genes

14 genes linked to SNP records with P < 10⁻¹⁰ in the selected scope. Supporting SNP records are counted per feature–gene pair.

Gene ID Alias Description Arabidopsis ortholog Supporting SNP recordsGene interval (1-based)Minimum P
Glyma.12G212300 hypothetical protein AT3G58710:WRKY69:WRKY DNA-binding protein 69 2Chr12:37131153–37134096 (+)2.19e-11
Glyma.16G111500 hypothetical protein AT4G35500:AT4G35500:Protein kinase superfamily protein 2Chr16:24626024–24635513 (+)1.207e-11
Glyma.16G209300 hypothetical protein NA 2Chr16:36856833–36863994 (-)5.621e-12
Glyma.05G236700 hypothetical protein AT4G33760:AT4G33760:tRNA synthetase class II (D, K and N) family protein 1Chr05:41301540–41310727 (+)9.82e-13
Glyma.06G291600 hypothetical protein AT4G22930:PYR4:pyrimidin 4 1Chr06:48024204–48029614 (+)9.061e-12
Glyma.06G291800 hypothetical protein NA 1Chr06:48044194–48047197 (-)2.822e-12
Glyma.06G292000 hypothetical protein NA 1Chr06:48081084–48084476 (-)9.061e-12
Glyma.06G292100 hypothetical protein NA 1Chr06:48095366–48097378 (+)9.061e-12
Glyma.06G292200 hypothetical protein AT5G44290:AT5G44290:Protein kinase superfamily protein 1Chr06:48100578–48107433 (-)2.822e-12
Glyma.06G292400 hypothetical protein AT4G28320:MAN5:Glycosyl hydrolase superfamily protein 1Chr06:48130296–48134955 (+)3.227e-13
Glyma.06G292900 hypothetical protein AT4G03540:AT4G03540:Uncharacterized protein family (UPF0497) 1Chr06:48170133–48173010 (-)1.178e-12
Glyma.12G212800 hypothetical protein NA 1Chr12:37179924–37185798 (-)2.815e-12
Glyma.16G111100 hypothetical protein NA 1Chr16:24438458–24444801 (+)1.207e-11
Glyma.20G236700 hypothetical protein AT3G05545:AT3G05545:RING/U-box superfamily protein 1Chr20:46886326–46894385 (+)7.968e-12