Soybean mGWAS DBExplore The Genetic Basis Of Soybean Metabolism Glycine max
Overview Annotation GWAS Evidence Associated genes

P21818

Metabolite ID
P21818
Deionized mass
366.0560 Da
Average m/z
367.0635
Average RT
13.6978
Adduct
[M+H]+
Association scope
Overlapping genes only
Associated genes
86
GWAS result file
Available
Open in Soybean Metabolome Repository

Candidate annotations

Search compound candidates by deionized mass and tolerance. Follow compound IDs for database records, or use name searches to explore chemistry and soybean literature. About candidate annotations

GWAS Evidence

Dataset: indexed GWAS records.

Settings

SNP counts, plot highlights, gene associations and downloads use P < 10⁻¹⁰. Changing the threshold updates this page together.

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Associated genes

86 genes linked to SNP records with P < 10⁻¹⁰ in the selected scope. Supporting SNP records are counted per feature–gene pair.

Gene ID Alias Description Arabidopsis ortholog Supporting SNP recordsGene interval (1-based)Minimum P
Glyma.13G203300 hypothetical protein AT3G63530:BB:RING/U-box superfamily protein 4Chr13:31727841–31735910 (-)2.286e-17
Glyma.13G134400 hypothetical protein AT2G37370:AT2G37370:centrosomal protein of 135 kDa-like protein 3Chr13:24677399–24693129 (-)1.219e-11
Glyma.16G114900 hypothetical protein NA 3Chr16:25456379–25485759 (+)6.091e-11
Glyma.16G118100 hypothetical protein AT2G17570:cPT1:Undecaprenyl pyrophosphate synthetase family protein 3Chr16:26324650–26336836 (+)1.062e-12
Glyma.16G118400 hypothetical protein AT2G17190:AT2G17190:ubiquitin family protein 3Chr16:26356863–26371741 (-)1.062e-12
Glyma.09G282900 hypothetical protein AT2G29090:CYP707A2:cytochrome P450, family 707, subfamily A, polypeptide 2 2Chr09:49863377–49871270 (+)1.958e-13
Glyma.13G203200 hypothetical protein AT3G52105:AT3G52105:DIS3-exonuclease-like protein 2Chr13:31720004–31725252 (+)2.286e-17
Glyma.16G210300 hypothetical protein AT1G73340:AT1G73340:Cytochrome P450 superfamily protein 2Chr16:36943073–36948828 (+)9.098e-11
Glyma.01G034700 hypothetical protein NA 1Chr01:3599923–3602578 (-)3.755e-11
Glyma.01G123900 hypothetical protein AT3G51770:ETO1:tetratricopeptide repeat (TPR)-containing protein 1Chr01:42831758–42837350 (+)2.977e-11
Glyma.01G124100 hypothetical protein NA 1Chr01:42886229–42892204 (-)5.209e-11
Glyma.01G234100 hypothetical protein AT5G13270:RARE1:Pentatricopeptide repeat (PPR) superfamily protein 1Chr01:56022128–56026001 (+)3.463e-11
Glyma.03G022300 hypothetical protein AT3G60880:DHDPS1:dihydrodipicolinate synthase 1 1Chr03:2331191–2334210 (-)7.609e-11
Glyma.04G023600 hypothetical protein AT4G24200:AT4G24200:Transcription elongation factor (TFIIS) family protein 1Chr04:1864445–1871054 (+)1.016e-11
Glyma.04G084300 hypothetical protein AT2G25800:AT2G25800:elongation factor Ts (DUF810) 1Chr04:7153009–7158438 (+)2.172e-11
Glyma.04G112200 hypothetical protein AT5G51750:SBT1.3:subtilase 1.3 1Chr04:12562882–12565006 (+)1.786e-13
Glyma.05G124700 hypothetical protein NA 1Chr05:31807311–31817648 (+)2.269e-12
Glyma.05G127200 hypothetical protein AT1G29790:AT1G29790:S-adenosyl-L-methionine-dependent methyltransferases superfamily protein 1Chr05:32014213–32017922 (-)1.574e-11
Glyma.05G127300 hypothetical protein AT1G64520:RPN12a:regulatory particle non-ATPase 12A__AT5G42040:RPN12b:regulatory particle non-ATPase 12B 1Chr05:32021521–32025767 (-)6.132e-13
Glyma.05G127400 hypothetical protein AT1G29850:AT1G29850:double-stranded DNA-binding family protein 1Chr05:32030115–32033716 (+)6.132e-13
Glyma.05G127500 hypothetical protein NA 1Chr05:32041345–32049554 (+)3.909e-17
Glyma.05G127800 hypothetical protein AT4G18240:SS4:starch synthase 4 1Chr05:32125404–32138244 (+)6.294e-16
Glyma.05G127900 SAD1 AT5G48870:SAD1:Small nuclear ribonucleoprotein family protein 1Chr05:32139620–32141770 (-)6.294e-16
Glyma.05G128200 hypothetical protein AT5G46330:FLS2:Leucine-rich receptor-like protein kinase family protein 1Chr05:32158034–32162343 (-)6.294e-16
Glyma.05G131200 hypothetical protein AT5G58230:MSI1:Transducin/WD40 repeat-like superfamily protein 1Chr05:32421116–32425198 (-)1.145e-11
Glyma.05G236700 hypothetical protein AT4G33760:AT4G33760:tRNA synthetase class II (D, K and N) family protein 1Chr05:41301540–41310727 (+)3.26e-12
Glyma.05G237800 hypothetical protein AT1G48790:AMSH1:associated molecule with the SH3 domain of STAM 1 1Chr05:41406807–41413022 (-)1.677e-16
Glyma.06G121000 hypothetical protein NA 1Chr06:9848464–9850191 (-)1.573e-11
Glyma.06G125200 hypothetical protein AT4G27940:MTM1:manganese tracking factor for mitochondrial SOD2 1Chr06:10209787–10215982 (+)1.466e-15
Glyma.06G125300 hypothetical protein AT5G24105:AGP41:arabinogalactan protein 41 1Chr06:10216506–10218901 (-)1.466e-15
Glyma.06G126500 hypothetical protein AT5G04070:AT5G04070:NAD(P)-binding Rossmann-fold superfamily protein 1Chr06:10367536–10373426 (-)1.778e-12
Glyma.06G126900 hypothetical protein AT5G04520:AT5G04520:3-oxoacyl-acyl-carrier synthase-like protein (Protein of unknown function DUF455) 1Chr06:10403126–10408307 (-)6.062e-11
Glyma.06G130900 hypothetical protein AT4G27800:TAP38:thylakoid-associated phosphatase 38 1Chr06:10753446–10757827 (+)1.45e-11
Glyma.06G291600 hypothetical protein AT4G22930:PYR4:pyrimidin 4 1Chr06:48024204–48029614 (+)4.163e-11
Glyma.06G291800 hypothetical protein NA 1Chr06:48044194–48047197 (-)1.285e-11
Glyma.06G292000 hypothetical protein NA 1Chr06:48081084–48084476 (-)4.163e-11
Glyma.06G292100 hypothetical protein NA 1Chr06:48095366–48097378 (+)4.163e-11
Glyma.06G292200 hypothetical protein AT5G44290:AT5G44290:Protein kinase superfamily protein 1Chr06:48100578–48107433 (-)1.285e-11
Glyma.07G017600 hypothetical protein NA 1Chr07:1415837–1422680 (+)7.827e-11
Glyma.08G147500 hypothetical protein AT3G18680:AT3G18680:Amino acid kinase family protein 1Chr08:11253074–11256505 (+)1.433e-11
Glyma.08G148700 hypothetical protein NA 1Chr08:11384601–11387727 (-)1.263e-11
Glyma.08G150100 hypothetical protein AT2G44450:BGLU15:beta glucosidase 15 1Chr08:11525692–11536927 (+)7.704e-12
Glyma.08G202000 hypothetical protein AT1G52150:ATHB-15:Homeobox-leucine zipper family protein / lipid-binding START domain-containing protein 1Chr08:16375907–16384294 (-)7.806e-12
Glyma.08G210200 hypothetical protein NA 1Chr08:17010526–17012557 (+)3.157e-13
Glyma.08G210300 hypothetical protein NA 1Chr08:17011623–17012548 (-)3.157e-13
Glyma.09G060200 hypothetical protein AT5G57150:AT5G57150:basic helix-loop-helix (bHLH) DNA-binding superfamily protein 1Chr09:5571201–5579976 (-)1.302e-11
Glyma.09G060300 hypothetical protein AT5G57140:PAP28:purple acid phosphatase 28 1Chr09:5609003–5612943 (+)3.3e-11
Glyma.09G060600 hypothetical protein AT3G28430:AT3G28430:CLEC16A-like protein 1Chr09:5661672–5675338 (-)1.09e-12
Glyma.09G080200 hypothetical protein NA 1Chr09:9256042–9263239 (-)2.672e-14
Glyma.09G082000 hypothetical protein NA 1Chr09:9638564–9650178 (+)8.318e-17
Glyma.09G084300 hypothetical protein AT2G34680:AIR9:Outer arm dynein light chain 1 protein 1Chr09:10129602–10197250 (-)9.567e-16
Glyma.09G167000 hypothetical protein NA 1Chr09:39103764–39109664 (-)1.373e-13
Glyma.12G203700 hypothetical protein AT4G28260:AT4G28260:acyl-UDP-N-acetylglucosamine O-acyltransferase 1Chr12:36406747–36413696 (+)8.876e-12
Glyma.13G134300 hypothetical protein NA 1Chr13:24664171–24665742 (-)1.219e-11
Glyma.13G134500 hypothetical protein AT3G09560:PAH1:Lipin family protein 1Chr13:24696109–24705068 (-)6.338e-11
Glyma.13G203600 hypothetical protein AT5G13490:AAC2:ADP/ATP carrier 2 1Chr13:31753843–31756013 (-)2.815e-14
Glyma.13G203700 hypothetical protein NA 1Chr13:31780982–31784218 (+)2.286e-17
Glyma.13G203900 hypothetical protein NA 1Chr13:31793697–31796601 (-)2.974e-14
Glyma.13G204200 hypothetical protein NA 1Chr13:31822330–31826011 (+)1.756e-11
Glyma.14G094200 hypothetical protein AT5G11840:AT5G11840:YCF36, putative (DUF1230) 1Chr14:8770378–8774149 (-)5.794e-11
Glyma.14G094300 hypothetical protein NA 1Chr14:8771316–8772515 (+)5.794e-11
Glyma.14G094900 hypothetical protein AT1G60960:IRT3:iron regulated transporter 3 1Chr14:8824846–8827258 (-)7.112e-12
Glyma.15G121100 hypothetical protein NA 1Chr15:9567797–9570248 (+)9.661e-14
Glyma.15G121300 hypothetical protein AT5G47760:PGLP2:2-phosphoglycolate phosphatase 2 1Chr15:9584685–9590201 (-)7.059e-16
Glyma.15G121500 hypothetical protein AT1G03370:AT1G03370:C2 calcium/lipid-binding and GRAM domain containing protein 1Chr15:9602794–9615281 (+)9.661e-14
Glyma.15G121800 hypothetical protein NA 1Chr15:9643746–9648073 (+)9.661e-14
Glyma.15G124500 MLO-like protein 13 AT4G24250:MLO13:Seven transmembrane MLO family protein 1Chr15:9888761–9894068 (-)1.622e-12
Glyma.16G115300 hypothetical protein NA 1Chr16:25584135–25585667 (+)6.091e-11
Glyma.16G115400 hypothetical protein NA 1Chr16:25604547–25606360 (+)6.091e-11
Glyma.16G115500 hypothetical protein NA 1Chr16:25622503–25630816 (+)6.091e-11
Glyma.16G115600 hypothetical protein AT1G13410:AT1G13410:Tetratricopeptide repeat (TPR)-like superfamily protein 1Chr16:25661245–25664376 (-)6.091e-11
Glyma.16G116500 hypothetical protein AT4G16444:AT4G16444:tail-anchored protein insertion receptor WRB-like protein 1Chr16:26057276–26069534 (+)6.193e-12
Glyma.16G117400 hypothetical protein NA 1Chr16:26234552–26238233 (-)3.107e-13
Glyma.16G118200 hypothetical protein NA 1Chr16:26337169–26338323 (+)1.062e-12
Glyma.16G118600 hypothetical protein NA 1Chr16:26442194–26445922 (+)1.062e-12
Glyma.16G179800 hypothetical protein AT5G52520:OVA6:Class II aaRS and biotin synthetases superfamily protein 1Chr16:34022480–34027055 (-)1.911e-11
Glyma.16G210400 hypothetical protein AT1G73350:AT1G73350:ankyrin repeat protein 1Chr16:36949685–36953467 (+)6.697e-11
Glyma.17G121800 hypothetical protein AT1G73965:CLE13:CLAVATA3/ESR-RELATED 13 1Chr17:9746590–9748712 (+)2.068e-11
Glyma.17G135100 hypothetical protein AT1G62840:AT1G62840:ankyrin repeat/KH domain protein (DUF1442) 1Chr17:10870710–10872285 (+)4.06e-11
Glyma.18G055400 hypothetical protein NA 1Chr18:4824726–4828902 (+)1.404e-11
Glyma.18G106600 hypothetical protein NA 1Chr18:11947553–11951868 (+)3.352e-11
Glyma.18G112600 hypothetical protein NA 1Chr18:13398219–13405422 (+)1.769e-13
Glyma.18G236700 hypothetical protein AT3G61490:AT3G61490:Pectin lyase-like superfamily protein 1Chr18:52558809–52562720 (+)9.727e-12
Glyma.18G238000 hypothetical protein AT1G01490:AT1G01490:Heavy metal transport/detoxification superfamily protein 1Chr18:52679724–52682816 (+)2.948e-11
Glyma.19G195600 hypothetical protein AT3G52570:AT3G52570:alpha/beta-Hydrolases superfamily protein 1Chr19:45273343–45277374 (-)9.252e-11
Glyma.19G216500 hypothetical protein AT3G62390:TBL6:TRICHOME BIREFRINGENCE-LIKE 6 1Chr19:46951591–46954520 (+)7.931e-11