Soybean mGWAS DBExplore The Genetic Basis Of Soybean Metabolism Glycine max
Overview Annotation GWAS Evidence Associated genes

P21347

Metabolite ID
P21347
Deionized mass
384.1220 Da
Average m/z
385.1275
Average RT
13.5446
Adduct
[M+H]+
Association scope
Overlapping genes only
Associated genes
44
GWAS result file
Available
Open in Soybean Metabolome Repository

Candidate annotations

Search compound candidates by deionized mass and tolerance. Follow compound IDs for database records, or use name searches to explore chemistry and soybean literature. About candidate annotations

GWAS Evidence

Dataset: indexed GWAS records.

Settings

SNP counts, plot highlights, gene associations and downloads use P < 10⁻¹⁰. Changing the threshold updates this page together.

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Associated genes

44 genes linked to SNP records with P < 10⁻¹⁰ in the selected scope. Supporting SNP records are counted per feature–gene pair.

Gene ID Alias Description Arabidopsis ortholog Supporting SNP recordsGene interval (1-based)Minimum P
Glyma.06G201700 hypothetical protein NA 3Chr06:18577883–18617874 (+)3.511e-13
Glyma.03G023000 hypothetical protein AT4G00220:JLO:Lateral organ boundaries (LOB) domain family protein 2Chr03:2423540–2428634 (-)6.331e-13
Glyma.06G202200 hypothetical protein AT1G74310:HSP101:heat shock protein 101 2Chr06:18712866–18716868 (+)1.121e-16
Glyma.06G313500 hypothetical protein NA 2Chr06:50191600–50203098 (-)9.114e-13
Glyma.16G196900 hypothetical protein NA 2Chr16:35841279–35846894 (-)2.142e-11
Glyma.20G120200 hypothetical protein NA 2Chr20:36268998–36282456 (-)2.644e-14
Glyma.03G021700 hypothetical protein AT2G45490:AUR3:ataurora3 1Chr03:2248429–2251737 (+)2.289e-11
Glyma.03G022100 hypothetical protein AT4G32430:AT4G32430:Pentatricopeptide repeat (PPR) superfamily protein 1Chr03:2301675–2307263 (+)1.158e-12
Glyma.05G236400 hypothetical protein AT1G23210:GH9B6:glycosyl hydrolase 9B6__AT1G70710:GH9B1:glycosyl hydrolase 9B1 1Chr05:41274513–41279615 (-)7.721e-11
Glyma.05G236700 hypothetical protein AT4G33760:AT4G33760:tRNA synthetase class II (D, K and N) family protein 1Chr05:41301540–41310727 (+)9.654e-13
Glyma.06G202000 hypothetical protein AT5G07940:AT5G07940:dentin sialophosphoprotein-like protein 1Chr06:18655235–18667810 (-)1.319e-14
Glyma.07G129600 hypothetical protein AT4G29670:ACHT2:atypical CYS HIS rich thioredoxin 2 1Chr07:15404178–15410144 (-)7.508e-13
Glyma.08G171600 hypothetical protein NA 1Chr08:13642099–13646913 (+)2.255e-11
Glyma.08G171900 hypothetical protein AT3G12950:AT3G12950:Trypsin family protein 1Chr08:13688931–13694431 (+)1.093e-11
Glyma.08G199700 hypothetical protein AT5G50340:AT5G50340:DNA repair protein RadA-like protein 1Chr08:16130591–16137703 (+)9.048e-12
Glyma.08G199800 hypothetical protein NA 1Chr08:16137933–16142956 (-)9.048e-12
Glyma.08G199900 hypothetical protein AT3G16480:MPPalpha:mitochondrial processing peptidase alpha subunit 1Chr08:16146033–16151741 (+)9.047e-12
Glyma.08G330400 hypothetical protein NA 1Chr08:44820327–44823668 (+)7.212e-11
Glyma.08G330500 hypothetical protein AT3G07680:p24beta2:emp24/gp25L/p24 family/GOLD family protein 1Chr08:44824324–44827127 (-)7.212e-11
Glyma.09G080200 hypothetical protein NA 1Chr09:9256042–9263239 (-)4.447e-11
Glyma.09G082000 hypothetical protein NA 1Chr09:9638564–9650178 (+)2.865e-13
Glyma.09G084300 hypothetical protein AT2G34680:AIR9:Outer arm dynein light chain 1 protein 1Chr09:10129602–10197250 (-)2.531e-11
Glyma.10G263800 hypothetical protein AT1G23010:LPR1:Cupredoxin superfamily protein 1Chr10:48805999–48811533 (-)9.778e-11
Glyma.11G048300 hypothetical protein AT4G37640:ACA2:calcium ATPase 2 1Chr11:3601241–3607177 (+)2.634e-13
Glyma.11G049700 hypothetical protein NA 1Chr11:3731308–3734534 (+)1.261e-13
Glyma.11G050300 hypothetical protein AT2G23093:AT2G23093:Major facilitator superfamily protein 1Chr11:3765453–3771565 (+)2.838e-16
Glyma.11G050500 hypothetical protein AT5G67370:CGLD27:DUF1230 family protein (DUF1230) 1Chr11:3778152–3782174 (+)2.838e-16
Glyma.11G050600 hypothetical protein NA 1Chr11:3779988–3786583 (-)2.838e-16
Glyma.11G051600 hypothetical protein NA 1Chr11:3857225–3859564 (-)2.838e-16
Glyma.12G143200 hypothetical protein NA 1Chr12:18578399–18582934 (-)4.577e-14
Glyma.12G183400 hypothetical protein NA 1Chr12:34427496–34440319 (-)4.123e-11
Glyma.12G202200 hypothetical protein AT2G20860:LIP1:lipoic acid synthase 1 1Chr12:36267599–36271584 (+)9.274e-11
Glyma.12G202300 hypothetical protein NA 1Chr12:36275438–36276838 (+)9.274e-11
Glyma.14G093100 hypothetical protein NA 1Chr14:8654730–8655892 (-)2.972e-11
Glyma.15G121100 hypothetical protein NA 1Chr15:9567797–9570248 (+)3.82e-11
Glyma.15G121300 hypothetical protein AT5G47760:PGLP2:2-phosphoglycolate phosphatase 2 1Chr15:9584685–9590201 (-)8.122e-11
Glyma.15G121500 hypothetical protein AT1G03370:AT1G03370:C2 calcium/lipid-binding and GRAM domain containing protein 1Chr15:9602794–9615281 (+)3.82e-11
Glyma.15G121800 hypothetical protein NA 1Chr15:9643746–9648073 (+)3.82e-11
Glyma.16G138900 hypothetical protein NA 1Chr16:29620531–29621995 (+)7.358e-11
Glyma.16G179800 hypothetical protein AT5G52520:OVA6:Class II aaRS and biotin synthetases superfamily protein 1Chr16:34022480–34027055 (-)2.78e-12
Glyma.16G182600 hypothetical protein AT5G52400:CYP715A1:cytochrome P450, family 715, subfamily A, polypeptide 1 1Chr16:34364037–34367765 (-)4.178e-11
Glyma.18G021700 hypothetical protein NA 1Chr18:1590986–1596262 (-)6.795e-12
Glyma.20G114000 hypothetical protein NA 1Chr20:35578719–35584659 (-)2.482e-13
Glyma.20G114400 hypothetical protein AT1G68585:AT1G68585:uncharacterized protein 1Chr20:35614355–35616709 (-)2.713e-12