Soybean mGWAS DBExplore The Genetic Basis Of Soybean Metabolism Glycine max
Overview Annotation GWAS Evidence Associated genes

P21289

Metabolite ID
P21289
Deionized mass
790.2167 Da
Average m/z
791.2227
Average RT
13.5283
Adduct
[M+H]+
Association scope
Overlapping genes only
Associated genes
68
GWAS result file
Available
Open in Soybean Metabolome Repository

Candidate annotations

Search compound candidates by deionized mass and tolerance. Follow compound IDs for database records, or use name searches to explore chemistry and soybean literature. About candidate annotations

GWAS Evidence

Dataset: indexed GWAS records.

Settings

SNP counts, plot highlights, gene associations and downloads use P < 10⁻¹⁰. Changing the threshold updates this page together.

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Associated genes

68 genes linked to SNP records with P < 10⁻¹⁰ in the selected scope. Supporting SNP records are counted per feature–gene pair.

Gene ID Alias Description Arabidopsis ortholog Supporting SNP recordsGene interval (1-based)Minimum P
Glyma.19G027000 hypothetical protein NA 4Chr19:3335896–3343744 (+)3.503e-12
Glyma.13G134400 hypothetical protein AT2G37370:AT2G37370:centrosomal protein of 135 kDa-like protein 3Chr13:24677399–24693129 (-)2.113e-15
Glyma.02G063200 hypothetical protein NA 2Chr02:5680261–5682907 (-)2.05e-11
Glyma.07G068300 hypothetical protein AT5G62980:FOLB2:Dihydroneopterin aldolase__AT3G11750:FOLB1:Dihydroneopterin aldolase 2Chr07:6169729–6172231 (+)1.328e-11
Glyma.13G135700 hypothetical protein NA 2Chr13:24812720–24818735 (+)8.44e-13
Glyma.13G135800 hypothetical protein AT5G02800:CDL1:Protein kinase superfamily protein 2Chr13:24820151–24823999 (-)8.439e-13
Glyma.16G117400 hypothetical protein NA 2Chr16:26234552–26238233 (-)6.299e-14
Glyma.19G026600 hypothetical protein AT4G13700:PAP23:purple acid phosphatase 23 2Chr19:3303658–3312907 (-)3.503e-12
Glyma.19G029600 hypothetical protein NA 2Chr19:3681517–3690884 (-)1.004e-11
Glyma.19G029800 hypothetical protein NA 2Chr19:3724518–3729860 (-)1.198e-13
Glyma.01G169700 hypothetical protein AT4G36410:UBC17:ubiquitin-conjugating enzyme 17 1Chr01:50715084–50719427 (-)1.799e-11
Glyma.01G169800 hypothetical protein AT4G36400:D2HGDH:FAD-linked oxidases family protein 1Chr01:50726088–50733347 (-)1.799e-11
Glyma.01G173900 hypothetical protein NA 1Chr01:51092004–51094319 (+)4.075e-11
Glyma.02G062600 hypothetical protein AT2G23540:AT2G23540:GDSL-like Lipase/Acylhydrolase superfamily protein 1Chr02:5645621–5648965 (+)4.309e-11
Glyma.02G063000 hypothetical protein AT4G37150:MES9:methyl esterase 9__AT2G23560:MES7:methyl esterase 7 1Chr02:5674394–5675971 (-)3.328e-11
Glyma.02G063100 hypothetical protein AT2G23560:MES7:methyl esterase 7 1Chr02:5675594–5678429 (-)3.328e-11
Glyma.03G016700 hypothetical protein AT4G00740:QUA3:S-adenosyl-L-methionine-dependent methyltransferases superfamily protein 1Chr03:1683395–1688893 (-)7.758e-12
Glyma.03G021400 hypothetical protein AT2G45540:AT2G45540:WD-40 repeat family protein / beige-like protein 1Chr03:2202325–2234931 (+)5.474e-11
Glyma.03G021700 hypothetical protein AT2G45490:AUR3:ataurora3 1Chr03:2248429–2251737 (+)2.595e-11
Glyma.03G022100 hypothetical protein AT4G32430:AT4G32430:Pentatricopeptide repeat (PPR) superfamily protein 1Chr03:2301675–2307263 (+)2.383e-12
Glyma.03G023000 hypothetical protein AT4G00220:JLO:Lateral organ boundaries (LOB) domain family protein 1Chr03:2423540–2428634 (-)1.146e-11
Glyma.03G108400 hypothetical protein NA 1Chr03:30897839–30899556 (+)8.593e-11
Glyma.03G109100 hypothetical protein NA 1Chr03:31002094–31010324 (-)1.914e-11
Glyma.03G202700 hypothetical protein AT5G16280:AT5G16280:Tetratricopeptide repeat (TPR)-like superfamily protein 1Chr03:41108071–41128352 (+)5.75e-12
Glyma.03G209700 hypothetical protein NA 1Chr03:41646792–41648527 (+)1.104e-11
Glyma.04G220400 hypothetical protein AT5G10020:AT5G10020:Leucine-rich receptor-like protein kinase family protein 1Chr04:49102263–49108229 (+)6.217e-12
Glyma.05G231800 ALDH2C1 aldehyde dehydrogenase family 2 member C1 AT3G24503:ALDH2C4:aldehyde dehydrogenase 2C4 1Chr05:40924505–40929251 (+)4.06e-12
Glyma.05G236700 hypothetical protein AT4G33760:AT4G33760:tRNA synthetase class II (D, K and N) family protein 1Chr05:41301540–41310727 (+)9.068e-11
Glyma.05G237800 hypothetical protein AT1G48790:AMSH1:associated molecule with the SH3 domain of STAM 1 1Chr05:41406807–41413022 (-)3.133e-12
Glyma.06G126500 hypothetical protein AT5G04070:AT5G04070:NAD(P)-binding Rossmann-fold superfamily protein 1Chr06:10367536–10373426 (-)2.998e-13
Glyma.06G130900 hypothetical protein AT4G27800:TAP38:thylakoid-associated phosphatase 38 1Chr06:10753446–10757827 (+)7.997e-11
Glyma.07G021800 hypothetical protein AT1G80920:J8:Chaperone DnaJ-domain superfamily protein 1Chr07:1697119–1698666 (+)3.142e-11
Glyma.07G068000 hypothetical protein AT3G61460:BRH1: 1Chr07:6128862–6129740 (+)2.964e-11
Glyma.07G068200 hypothetical protein AT4G00310:EDA8:Putative membrane lipoprotein 1Chr07:6146155–6148036 (-)4.372e-11
Glyma.07G068400 hypothetical protein AT1G29320:AT1G29320:Transducin/WD40 repeat-like superfamily protein 1Chr07:6173172–6180430 (-)9.928e-12
Glyma.07G068600 hypothetical protein NA 1Chr07:6192764–6197166 (+)9.928e-12
Glyma.07G068700 hypothetical protein AT2G46060:AT2G46060:transmembrane protein-like protein 1Chr07:6200187–6208590 (+)6.677e-12
Glyma.07G068800 hypothetical protein NA 1Chr07:6211775–6221107 (-)6.677e-12
Glyma.07G069100 hypothetical protein NA 1Chr07:6246145–6250192 (+)9.928e-12
Glyma.07G071800 hypothetical protein AT4G20960:PyrD:Cytidine/deoxycytidylate deaminase family protein 1Chr07:6523253–6526707 (+)3.36e-12
Glyma.07G095400 hypothetical protein NA 1Chr07:8914725–8920132 (+)2.118e-11
Glyma.07G100400 hypothetical protein AT3G18050:AT3G18050:GPI-anchored protein 1Chr07:9523110–9526319 (+)3.084e-13
Glyma.08G016700 hypothetical protein AT1G63840:AT1G63840:RING/U-box superfamily protein 1Chr08:1330226–1331366 (-)5.008e-14
Glyma.08G111700 hypothetical protein NA 1Chr08:8604527–8606424 (-)3.486e-11
Glyma.09G016500 hypothetical protein NA 1Chr09:1274652–1276853 (-)9.192e-11
Glyma.10G263800 hypothetical protein AT1G23010:LPR1:Cupredoxin superfamily protein 1Chr10:48805999–48811533 (-)9.612e-12
Glyma.13G134300 hypothetical protein NA 1Chr13:24664171–24665742 (-)2.113e-15
Glyma.13G134500 hypothetical protein AT3G09560:PAH1:Lipin family protein 1Chr13:24696109–24705068 (-)5.935e-11
Glyma.13G135300 hypothetical protein NA 1Chr13:24770681–24773826 (+)9.382e-11
Glyma.13G135400 hypothetical protein AT5G12130:PDE149:integral membrane TerC family protein 1Chr13:24786242–24791938 (+)9.382e-11
Glyma.13G135500 hypothetical protein AT5G02780:GSTL1:glutathione transferase lambda 1 1Chr13:24798567–24801567 (+)8.44e-13
Glyma.14G068500 hypothetical protein NA 1Chr14:5741909–5745574 (-)4.346e-13
Glyma.14G071600 hypothetical protein AT1G27620:AT1G27620:HXXXD-type acyl-transferase family protein 1Chr14:6016839–6019954 (+)2.624e-12
Glyma.14G071700 hypothetical protein AT1G19660:AT1G19660:Wound-responsive family protein__AT1G75380:BBD1:bifunctional nuclease in basal defense response 1 1Chr14:6037810–6041899 (+)3.163e-14
Glyma.14G071800 hypothetical protein NA 1Chr14:6040746–6041899 (-)3.163e-14
Glyma.14G213400 hypothetical protein NA 1Chr14:47844823–47847028 (+)1.695e-12
Glyma.15G124500 MLO-like protein 13 AT4G24250:MLO13:Seven transmembrane MLO family protein 1Chr15:9888761–9894068 (-)2.894e-12
Glyma.15G275100 hypothetical protein AT5G42470:AT5G42470:BRCA1-A complex subunit BRE-like protein 1Chr15:51350998–51355557 (-)3.588e-11
Glyma.16G115800 hypothetical protein NA 1Chr16:25719040–25728740 (-)8.021e-13
Glyma.16G117700 hypothetical protein NA 1Chr16:26279957–26283458 (+)4.795e-11
Glyma.16G118100 hypothetical protein AT2G17570:cPT1:Undecaprenyl pyrophosphate synthetase family protein 1Chr16:26324650–26336836 (+)1.924e-14
Glyma.16G119400 hypothetical protein NA 1Chr16:26684278–26687087 (+)4.86e-15
Glyma.16G196900 hypothetical protein NA 1Chr16:35841279–35846894 (-)2.143e-11
Glyma.16G198600 hypothetical protein AT5G52060:BAG1:BCL-2-associated athano 1 1Chr16:35958085–35960833 (+)4.423e-12
Glyma.17G251200 hypothetical protein NA 1Chr17:40605249–40607536 (+)5.938e-12
Glyma.19G012100 hypothetical protein AT3G28150:TBL22:TRICHOME BIREFRINGENCE-LIKE 22 1Chr19:1155711–1161298 (-)2.105e-11
Glyma.19G012300 hypothetical protein NA 1Chr19:1165111–1173031 (-)2.105e-11
Glyma.19G028100 hypothetical protein AT3G01040:GAUT13:galacturonosyltransferase 13 1Chr19:3511914–3519141 (+)4.483e-11