Soybean mGWAS DBExplore The Genetic Basis Of Soybean Metabolism Glycine max
Overview Annotation GWAS Evidence Associated genes

P21162

Metabolite ID
P21162
Deionized mass
368.1101 Da
Average m/z
369.1182
Average RT
13.4982
Adduct
[M+H]+
Association scope
Overlapping genes only
Associated genes
64
GWAS result file
Available
Open in Soybean Metabolome Repository

Candidate annotations

Search compound candidates by deionized mass and tolerance. Follow compound IDs for database records, or use name searches to explore chemistry and soybean literature. About candidate annotations

GWAS Evidence

Dataset: indexed GWAS records.

Settings

SNP counts, plot highlights, gene associations and downloads use P < 10⁻¹⁰. Changing the threshold updates this page together.

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Associated genes

64 genes linked to SNP records with P < 10⁻¹⁰ in the selected scope. Supporting SNP records are counted per feature–gene pair.

Gene ID Alias Description Arabidopsis ortholog Supporting SNP recordsGene interval (1-based)Minimum P
Glyma.07G021800 hypothetical protein AT1G80920:J8:Chaperone DnaJ-domain superfamily protein 2Chr07:1697119–1698666 (+)5.765e-11
Glyma.12G202200 hypothetical protein AT2G20860:LIP1:lipoic acid synthase 1 2Chr12:36267599–36271584 (+)6.523e-16
Glyma.12G202400 hypothetical protein AT4G03415:PP2C52:Protein phosphatase 2C family protein 2Chr12:36289704–36295084 (-)1.694e-13
Glyma.14G093100 hypothetical protein NA 2Chr14:8654730–8655892 (-)3.836e-11
Glyma.14G149300 hypothetical protein NA 2Chr14:32235308–32258014 (+)4.726e-12
Glyma.16G208500 EIF6 AT3G55620:eIF6A:Translation initiation factor IF6 2Chr16:36806718–36809299 (+)1.688e-12
Glyma.17G215800 Aberrant root formation protein 4 AT5G11030:ALF4:aberrant root formation protein 2Chr17:36328551–36338097 (+)4.452e-11
Glyma.03G023000 hypothetical protein AT4G00220:JLO:Lateral organ boundaries (LOB) domain family protein 1Chr03:2423540–2428634 (-)2.466e-12
Glyma.04G084200 hypothetical protein AT2G25830:AT2G25830:YebC-like protein 1Chr04:7137351–7146570 (-)2.623e-11
Glyma.05G034000 hypothetical protein AT4G03400:DFL2:Auxin-responsive GH3 family protein 1Chr05:2965889–2971412 (-)8.738e-12
Glyma.05G124700 hypothetical protein NA 1Chr05:31807311–31817648 (+)9.469e-11
Glyma.05G236400 hypothetical protein AT1G23210:GH9B6:glycosyl hydrolase 9B6__AT1G70710:GH9B1:glycosyl hydrolase 9B1 1Chr05:41274513–41279615 (-)7.582e-12
Glyma.05G236700 hypothetical protein AT4G33760:AT4G33760:tRNA synthetase class II (D, K and N) family protein 1Chr05:41301540–41310727 (+)6.845e-11
Glyma.06G317100 hypothetical protein AT5G61520:AT5G61520:Major facilitator superfamily protein 1Chr06:50586679–50589765 (+)4.433e-11
Glyma.07G018100 hypothetical protein NA 1Chr07:1442368–1445430 (-)9.043e-12
Glyma.07G018300 hypothetical protein AT3G27750:EMB3123:PPR containing protein 1Chr07:1457706–1458428 (+)9.043e-12
Glyma.09G080200 hypothetical protein NA 1Chr09:9256042–9263239 (-)4.443e-11
Glyma.09G082000 hypothetical protein NA 1Chr09:9638564–9650178 (+)1.448e-13
Glyma.09G084300 hypothetical protein AT2G34680:AIR9:Outer arm dynein light chain 1 protein 1Chr09:10129602–10197250 (-)1.358e-12
Glyma.09G249500 hypothetical protein NA 1Chr09:47056885–47062577 (+)9.145e-11
Glyma.10G078700 hypothetical protein NA 1Chr10:8882318–8903950 (+)1.993e-11
Glyma.10G079100 hypothetical protein NA 1Chr10:8960669–8962364 (-)1.993e-11
Glyma.10G079800 hypothetical protein NA 1Chr10:9223520–9228511 (-)1.993e-11
Glyma.10G080000 hypothetical protein AT3G11660:NHL1:NDR1/HIN1-like 1__AT3G52470:AT3G52470:Late embryosis abundant (LEA) hydroxyproline-rich glycoprotein fam… 1Chr10:9258476–9260697 (-)1.993e-11
Glyma.10G081200 hypothetical protein NA 1Chr10:9600771–9603988 (-)1.356e-11
Glyma.10G081700 hypothetical protein NA 1Chr10:9752508–9758422 (+)9.28e-13
Glyma.10G238200 hypothetical protein AT5G07250:RBL3:RHOMBOID-like protein 3 1Chr10:46680865–46684088 (+)4.569e-11
Glyma.11G049700 hypothetical protein NA 1Chr11:3731308–3734534 (+)1.385e-11
Glyma.11G050300 hypothetical protein AT2G23093:AT2G23093:Major facilitator superfamily protein 1Chr11:3765453–3771565 (+)4.686e-11
Glyma.11G050500 hypothetical protein AT5G67370:CGLD27:DUF1230 family protein (DUF1230) 1Chr11:3778152–3782174 (+)4.686e-11
Glyma.11G050600 hypothetical protein NA 1Chr11:3779988–3786583 (-)4.686e-11
Glyma.11G051600 hypothetical protein NA 1Chr11:3857225–3859564 (-)4.686e-11
Glyma.12G114500 hypothetical protein AT4G22930:PYR4:pyrimidin 4 1Chr12:11396572–11400825 (-)3.246e-11
Glyma.12G114900 hypothetical protein NA 1Chr12:11457987–11462951 (-)3.246e-11
Glyma.12G202300 hypothetical protein NA 1Chr12:36275438–36276838 (+)6.523e-16
Glyma.12G203600 EXPB8 AT2G20750:EXPB1:expansin B1 1Chr12:36390283–36394245 (-)4.017e-11
Glyma.14G067800 hypothetical protein AT3G12380:ARP5:actin-related protein 5 1Chr14:5675792–5680343 (+)2.28e-12
Glyma.14G069500 hypothetical protein AT5G37810:NIP4;1:NOD26-like intrinsic protein 4;1 1Chr14:5822246–5825628 (-)3.469e-11
Glyma.14G148800 hypothetical protein AT1G44760:AT1G44760:Adenine nucleotide alpha hydrolases-like superfamily protein 1Chr14:32154755–32157298 (+)4.726e-12
Glyma.14G201600 hypothetical protein NA 1Chr14:46703283–46706500 (+)9.266e-11
Glyma.14G201700 hypothetical protein NA 1Chr14:46711634–46715644 (-)9.266e-11
Glyma.15G121100 hypothetical protein NA 1Chr15:9567797–9570248 (+)5.733e-12
Glyma.15G121300 hypothetical protein AT5G47760:PGLP2:2-phosphoglycolate phosphatase 2 1Chr15:9584685–9590201 (-)6.784e-12
Glyma.15G121500 hypothetical protein AT1G03370:AT1G03370:C2 calcium/lipid-binding and GRAM domain containing protein 1Chr15:9602794–9615281 (+)5.733e-12
Glyma.15G121800 hypothetical protein NA 1Chr15:9643746–9648073 (+)5.733e-12
Glyma.15G124000 hypothetical protein NA 1Chr15:9845097–9849312 (-)1.987e-11
Glyma.15G124500 MLO-like protein 13 AT4G24250:MLO13:Seven transmembrane MLO family protein 1Chr15:9888761–9894068 (-)1.183e-11
Glyma.16G019400 SHAT1-5 NAC domain-containing protein 43-like NA 1Chr16:1725643–1728272 (+)4.864e-11
Glyma.16G020200 hypothetical protein NA 1Chr16:1828561–1835982 (-)4.965e-13
Glyma.16G020500 hypothetical protein AT4G00870:AT4G00870:basic helix-loop-helix (bHLH) DNA-binding superfamily protein 1Chr16:1877938–1879947 (-)8.171e-12
Glyma.16G145100 hypothetical protein NA 1Chr16:30578388–30581421 (-)6.216e-11
Glyma.16G145600 hypothetical protein AT1G11310:MLO2:Seven transmembrane MLO family protein__AT2G39200:MLO12:Seven transmembrane MLO family protein__AT1G6156… 1Chr16:30652378–30659548 (+)6.216e-11
Glyma.16G146300 hypothetical protein NA 1Chr16:30714315–30716624 (+)3.425e-11
Glyma.16G146700 hypothetical protein NA 1Chr16:30755899–30759360 (-)3.425e-11
Glyma.16G147400 hypothetical protein NA 1Chr16:30817535–30821568 (+)7.584e-11
Glyma.16G208400 hypothetical protein NA 1Chr16:36789890–36801967 (-)2.083e-11
Glyma.17G064000 hypothetical protein AT2G18840:AT2G18840:Integral membrane Yip1 family protein__AT4G30260:AT4G30260:Integral membrane Yip1 family protein 1Chr17:4924830–4930155 (-)8.602e-11
Glyma.17G064200 hypothetical protein AT5G57500:AT5G57500:Galactosyltransferase family protein 1Chr17:4943412–4944357 (-)8.602e-11
Glyma.17G215700 hypothetical protein AT5G11040:TRS120:TRS120 1Chr17:36319785–36329259 (-)4.452e-11
Glyma.18G197500 hypothetical protein NA 1Chr18:47377826–47380850 (+)1.454e-11
Glyma.19G011600 hypothetical protein NA 1Chr19:1111789–1116419 (+)9.181e-11
Glyma.19G011700 hypothetical protein AT3G01420:DOX1:Peroxidase superfamily protein 1Chr19:1123637–1130946 (+)9.181e-11
Glyma.19G012100 hypothetical protein AT3G28150:TBL22:TRICHOME BIREFRINGENCE-LIKE 22 1Chr19:1155711–1161298 (-)1.423e-12
Glyma.19G012300 hypothetical protein NA 1Chr19:1165111–1173031 (-)1.423e-12