Overview Annotation GWAS Evidence Associated genes

P20890

Metabolite ID
P20890
Deionized mass
345.5680 Da
Average m/z
346.5740
Average RT
13.4247
Adduct
[M+H]+
Association scope
Overlapping genes only
Associated genes
29
GWAS result file
Available

Candidate annotations

Search compound candidates by deionized mass and tolerance. Follow compound IDs for database records, or use name searches to explore chemistry and soybean literature. About candidate annotations

GWAS Evidence

Dataset: indexed GWAS records.

Settings

SNP counts, plot highlights, gene associations and downloads use P < 10⁻¹⁰. Changing the threshold updates this page together.

Loading GWAS records…

Loading Manhattan plot…

This Q–Q plot describes the indexed records. For downsampled files, it does not represent the distribution across all tested variants. Data coverage

Loading Q–Q plot…
Loading GWAS summary…

Associated genes

29 genes linked to SNP records with P < 10⁻¹⁰ in the selected scope. Supporting SNP records are counted per feature–gene pair.

Gene ID Alias Description Arabidopsis ortholog Supporting SNP recordsGene interval (1-based)Minimum P
Glyma.16G114900 hypothetical protein NA 3Chr16:25456379–25485759 (+)2.592e-12
Glyma.16G118100 hypothetical protein AT2G17570:cPT1:Undecaprenyl pyrophosphate synthetase family protein 3Chr16:26324650–26336836 (+)9.981e-17
Glyma.16G118400 hypothetical protein AT2G17190:AT2G17190:ubiquitin family protein 3Chr16:26356863–26371741 (-)9.981e-17
Glyma.06G292900 hypothetical protein AT4G03540:AT4G03540:Uncharacterized protein family (UPF0497) 2Chr06:48170133–48173010 (-)8.256e-12
Glyma.16G111500 hypothetical protein AT4G35500:AT4G35500:Protein kinase superfamily protein 2Chr16:24626024–24635513 (+)6.245e-11
Glyma.16G117400 hypothetical protein NA 2Chr16:26234552–26238233 (-)4.449e-14
Glyma.05G236700 hypothetical protein AT4G33760:AT4G33760:tRNA synthetase class II (D, K and N) family protein 1Chr05:41301540–41310727 (+)7.214e-15
Glyma.05G237800 hypothetical protein AT1G48790:AMSH1:associated molecule with the SH3 domain of STAM 1 1Chr05:41406807–41413022 (-)4.253e-11
Glyma.06G291800 hypothetical protein NA 1Chr06:48044194–48047197 (-)9.826e-12
Glyma.06G292200 hypothetical protein AT5G44290:AT5G44290:Protein kinase superfamily protein 1Chr06:48100578–48107433 (-)9.826e-12
Glyma.06G292400 hypothetical protein AT4G28320:MAN5:Glycosyl hydrolase superfamily protein 1Chr06:48130296–48134955 (+)7.092e-12
Glyma.11G077300 hypothetical protein AT2G17890:CPK16:calcium-dependent protein kinase 16__AT5G66210:CPK28:calcium-dependent protein kinase 28__AT4G36070:CPK… 1Chr11:5795953–5801540 (+)4.917e-11
Glyma.11G182600 hypothetical protein AT5G22400:AT5G22400:Rho GTPase activating protein with PAK-box/P21-Rho-binding domain-containing protein 1Chr11:24998933–25003549 (-)2.45e-11
Glyma.15G124500 MLO-like protein 13 AT4G24250:MLO13:Seven transmembrane MLO family protein 1Chr15:9888761–9894068 (-)9.263e-12
Glyma.16G111100 hypothetical protein NA 1Chr16:24438458–24444801 (+)6.245e-11
Glyma.16G115300 hypothetical protein NA 1Chr16:25584135–25585667 (+)2.592e-12
Glyma.16G115400 hypothetical protein NA 1Chr16:25604547–25606360 (+)2.592e-12
Glyma.16G115500 hypothetical protein NA 1Chr16:25622503–25630816 (+)2.592e-12
Glyma.16G115600 hypothetical protein AT1G13410:AT1G13410:Tetratricopeptide repeat (TPR)-like superfamily protein 1Chr16:25661245–25664376 (-)2.592e-12
Glyma.16G116500 hypothetical protein AT4G16444:AT4G16444:tail-anchored protein insertion receptor WRB-like protein 1Chr16:26057276–26069534 (+)1.092e-12
Glyma.16G117700 hypothetical protein NA 1Chr16:26279957–26283458 (+)7.214e-11
Glyma.16G118200 hypothetical protein NA 1Chr16:26337169–26338323 (+)9.981e-17
Glyma.16G118600 hypothetical protein NA 1Chr16:26442194–26445922 (+)9.981e-17
Glyma.16G119300 hypothetical protein NA 1Chr16:26643902–26644416 (+)6.897e-11
Glyma.16G179800 hypothetical protein AT5G52520:OVA6:Class II aaRS and biotin synthetases superfamily protein 1Chr16:34022480–34027055 (-)6.907e-11
Glyma.18G073500 hypothetical protein AT3G44730:KP1:kinesin-like protein 1 1Chr18:6971929–6982758 (+)7.736e-14
Glyma.19G031200 hypothetical protein NA 1Chr19:3870532–3874170 (-)3.08e-12
Glyma.19G032800 hypothetical protein NA 1Chr19:4196959–4199265 (-)1.193e-13
Glyma.20G022500 hypothetical protein NA 1Chr20:2342943–2353164 (+)5.17e-11