Soybean mGWAS DBExplore The Genetic Basis Of Soybean Metabolism Glycine max
Overview Annotation GWAS Evidence Associated genes

P20371

Metabolite ID
P20371
Deionized mass
694.0848 Da
Average m/z
695.0881
Average RT
13.2883
Adduct
[M+H]+
Association scope
Overlapping genes only
Associated genes
109
GWAS result file
Available
Open in Soybean Metabolome Repository

Candidate annotations

Search compound candidates by deionized mass and tolerance. Follow compound IDs for database records, or use name searches to explore chemistry and soybean literature. About candidate annotations

GWAS Evidence

Dataset: indexed GWAS records.

Settings

SNP counts, plot highlights, gene associations and downloads use P < 10⁻¹⁰. Changing the threshold updates this page together.

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Associated genes

109 genes linked to SNP records with P < 10⁻¹⁰ in the selected scope. Supporting SNP records are counted per feature–gene pair.

Gene ID Alias Description Arabidopsis ortholog Supporting SNP recordsGene interval (1-based)Minimum P
Glyma.19G027000 hypothetical protein NA 4Chr19:3335896–3343744 (+)4.183e-12
Glyma.13G134400 hypothetical protein AT2G37370:AT2G37370:centrosomal protein of 135 kDa-like protein 3Chr13:24677399–24693129 (-)2.484e-11
Glyma.16G147900 hypothetical protein NA 3Chr16:30864919–30872425 (+)4.105e-12
Glyma.16G159100 hypothetical protein NA 3Chr16:31889835–31894662 (+)7.394e-12
Glyma.16G161500 hypothetical protein NA 3Chr16:32076715–32092322 (-)8.488e-11
Glyma.18G106600 hypothetical protein NA 3Chr18:11947553–11951868 (+)4.662e-16
Glyma.07G021800 hypothetical protein AT1G80920:J8:Chaperone DnaJ-domain superfamily protein 2Chr07:1697119–1698666 (+)1.06e-13
Glyma.13G135700 hypothetical protein NA 2Chr13:24812720–24818735 (+)2.026e-11
Glyma.13G135800 hypothetical protein AT5G02800:CDL1:Protein kinase superfamily protein 2Chr13:24820151–24823999 (-)2.026e-11
Glyma.13G203300 hypothetical protein AT3G63530:BB:RING/U-box superfamily protein 2Chr13:31727841–31735910 (-)3.239e-11
Glyma.14G149300 hypothetical protein NA 2Chr14:32235308–32258014 (+)9.562e-17
Glyma.15G257100 hypothetical protein AT1G56070:LOS1:Ribosomal protein S5/Elongation factor G/III/V family protein 2Chr15:48661607–48665946 (-)9.163e-12
Glyma.19G026600 hypothetical protein AT4G13700:PAP23:purple acid phosphatase 23 2Chr19:3303658–3312907 (-)4.183e-12
Glyma.01G018000 hypothetical protein NA 1Chr01:1736217–1737749 (-)6.755e-12
Glyma.02G003000 hypothetical protein NA 1Chr02:340197–343894 (+)3.557e-11
Glyma.02G003400 hypothetical protein AT5G46050:PTR3:peptide transporter 3 1Chr02:391370–399111 (-)3.557e-11
Glyma.02G204700 hypothetical protein AT4G30610:BRS1:alpha/beta-Hydrolases superfamily protein 1Chr02:38993365–39000790 (+)2.8e-14
Glyma.02G205300 hypothetical protein NA 1Chr02:39037472–39038396 (-)3.653e-13
Glyma.03G023000 hypothetical protein AT4G00220:JLO:Lateral organ boundaries (LOB) domain family protein 1Chr03:2423540–2428634 (-)6.777e-14
Glyma.03G209700 hypothetical protein NA 1Chr03:41646792–41648527 (+)2.412e-11
Glyma.03G223000 hypothetical protein AT1G02500:SAM1:S-adenosylmethionine synthetase 1 1Chr03:42579900–42582675 (+)9.633e-17
Glyma.03G223300 hypothetical protein AT3G62190:AT3G62190:Chaperone DnaJ-domain superfamily protein 1Chr03:42601145–42604438 (-)4.484e-13
Glyma.04G112200 hypothetical protein AT5G51750:SBT1.3:subtilase 1.3 1Chr04:12562882–12565006 (+)3.789e-11
Glyma.04G116900 hypothetical protein NA 1Chr04:13696275–13700803 (+)8.126e-13
Glyma.05G124700 hypothetical protein NA 1Chr05:31807311–31817648 (+)4.909e-11
Glyma.05G127200 hypothetical protein AT1G29790:AT1G29790:S-adenosyl-L-methionine-dependent methyltransferases superfamily protein 1Chr05:32014213–32017922 (-)3.194e-13
Glyma.05G127300 hypothetical protein AT1G64520:RPN12a:regulatory particle non-ATPase 12A__AT5G42040:RPN12b:regulatory particle non-ATPase 12B 1Chr05:32021521–32025767 (-)6.43e-13
Glyma.05G127400 hypothetical protein AT1G29850:AT1G29850:double-stranded DNA-binding family protein 1Chr05:32030115–32033716 (+)6.43e-13
Glyma.05G127500 hypothetical protein NA 1Chr05:32041345–32049554 (+)2.755e-14
Glyma.05G127800 hypothetical protein AT4G18240:SS4:starch synthase 4 1Chr05:32125404–32138244 (+)5.77e-14
Glyma.05G127900 SAD1 AT5G48870:SAD1:Small nuclear ribonucleoprotein family protein 1Chr05:32139620–32141770 (-)5.77e-14
Glyma.05G128200 hypothetical protein AT5G46330:FLS2:Leucine-rich receptor-like protein kinase family protein 1Chr05:32158034–32162343 (-)5.77e-14
Glyma.05G236400 hypothetical protein AT1G23210:GH9B6:glycosyl hydrolase 9B6__AT1G70710:GH9B1:glycosyl hydrolase 9B1 1Chr05:41274513–41279615 (-)2.399e-11
Glyma.05G236700 hypothetical protein AT4G33760:AT4G33760:tRNA synthetase class II (D, K and N) family protein 1Chr05:41301540–41310727 (+)2.007e-13
Glyma.05G237800 hypothetical protein AT1G48790:AMSH1:associated molecule with the SH3 domain of STAM 1 1Chr05:41406807–41413022 (-)2.483e-11
Glyma.06G112300 hypothetical protein AT1G44780:AT1G44780:translation initiation factor__AT4G08310:AT4G08310:DNA ligase 1Chr06:9113982–9118848 (-)1.501e-11
Glyma.06G112600 hypothetical protein AT1G77620:AT1G77620:P-loop containing nucleoside triphosphate hydrolases superfamily protein 1Chr06:9134358–9144986 (+)1.501e-11
Glyma.06G112700 hypothetical protein AT1G44760:AT1G44760:Adenine nucleotide alpha hydrolases-like superfamily protein 1Chr06:9156973–9158659 (+)1.501e-11
Glyma.06G125200 hypothetical protein AT4G27940:MTM1:manganese tracking factor for mitochondrial SOD2 1Chr06:10209787–10215982 (+)1.918e-11
Glyma.06G125300 hypothetical protein AT5G24105:AGP41:arabinogalactan protein 41 1Chr06:10216506–10218901 (-)1.918e-11
Glyma.06G126500 hypothetical protein AT5G04070:AT5G04070:NAD(P)-binding Rossmann-fold superfamily protein 1Chr06:10367536–10373426 (-)8.004e-11
Glyma.07G021100 hypothetical protein NA 1Chr07:1647678–1650627 (+)8.673e-12
Glyma.07G021600 hypothetical protein AT5G48930:HCT:hydroxycinnamoyl-CoA shikimate/quinate hydroxycinnamoyl transferase 1Chr07:1673827–1680014 (-)8.673e-12
Glyma.07G021700 hypothetical protein NA 1Chr07:1684537–1692320 (+)8.632e-13
Glyma.08G016700 hypothetical protein AT1G63840:AT1G63840:RING/U-box superfamily protein 1Chr08:1330226–1331366 (-)2.866e-11
Glyma.08G202000 hypothetical protein AT1G52150:ATHB-15:Homeobox-leucine zipper family protein / lipid-binding START domain-containing protein 1Chr08:16375907–16384294 (-)1.07e-14
Glyma.08G330400 hypothetical protein NA 1Chr08:44820327–44823668 (+)7.479e-11
Glyma.08G330500 hypothetical protein AT3G07680:p24beta2:emp24/gp25L/p24 family/GOLD family protein 1Chr08:44824324–44827127 (-)7.479e-11
Glyma.09G016500 hypothetical protein NA 1Chr09:1274652–1276853 (-)3.849e-13
Glyma.09G016800 hypothetical protein NA 1Chr09:1300913–1311894 (+)6.475e-13
Glyma.09G018700 hypothetical protein NA 1Chr09:1470411–1472672 (-)6.62e-11
Glyma.09G080200 hypothetical protein NA 1Chr09:9256042–9263239 (-)1.334e-11
Glyma.09G082000 hypothetical protein NA 1Chr09:9638564–9650178 (+)1.359e-11
Glyma.09G084300 hypothetical protein AT2G34680:AIR9:Outer arm dynein light chain 1 protein 1Chr09:10129602–10197250 (-)7.696e-11
Glyma.09G282900 hypothetical protein AT2G29090:CYP707A2:cytochrome P450, family 707, subfamily A, polypeptide 2 1Chr09:49863377–49871270 (+)1.382e-11
Glyma.10G081200 hypothetical protein NA 1Chr10:9600771–9603988 (-)5.189e-11
Glyma.10G263800 hypothetical protein AT1G23010:LPR1:Cupredoxin superfamily protein 1Chr10:48805999–48811533 (-)4.521e-11
Glyma.10G264300 Mediator of RNA polymerase II transcription subunit 21 AT4G04780:MED21:mediator 21 1Chr10:48858818–48862498 (-)3.415e-11
Glyma.11G015300 hypothetical protein AT3G60500:CER7:3'-5'-exoribonuclease family protein 1Chr11:1048122–1055388 (+)3.217e-12
Glyma.11G049700 hypothetical protein NA 1Chr11:3731308–3734534 (+)9.875e-13
Glyma.11G050300 hypothetical protein AT2G23093:AT2G23093:Major facilitator superfamily protein 1Chr11:3765453–3771565 (+)3.315e-13
Glyma.11G050500 hypothetical protein AT5G67370:CGLD27:DUF1230 family protein (DUF1230) 1Chr11:3778152–3782174 (+)3.315e-13
Glyma.11G050600 hypothetical protein NA 1Chr11:3779988–3786583 (-)3.315e-13
Glyma.11G051600 hypothetical protein NA 1Chr11:3857225–3859564 (-)3.315e-13
Glyma.11G064300 hypothetical protein AT4G36780:BEH2:BES1/BZR1 homolog 2 1Chr11:4849799–4851673 (+)1.671e-12
Glyma.11G105500 hypothetical protein AT2G16640:TOC132:multimeric translocon complex in the outer envelope membrane 132 1Chr11:8015639–8020644 (-)9.825e-11
Glyma.12G007800 hypothetical protein NA 1Chr12:572469–583974 (+)3.287e-11
Glyma.12G108600 hypothetical protein NA 1Chr12:9994609–9997302 (-)3.834e-12
Glyma.12G109500 hypothetical protein AT4G03415:PP2C52:Protein phosphatase 2C family protein 1Chr12:10308026–10314332 (-)3.834e-12
Glyma.12G202200 hypothetical protein AT2G20860:LIP1:lipoic acid synthase 1 1Chr12:36267599–36271584 (+)8.851e-12
Glyma.12G202300 hypothetical protein NA 1Chr12:36275438–36276838 (+)8.851e-12
Glyma.12G228300 hypothetical protein AT3G15030:TCP4:TCP family transcription factor 4 1Chr12:38813527–38816237 (-)9.008e-11
Glyma.13G095000 hypothetical protein NA 1Chr13:21005327–21006774 (-)3.025e-12
Glyma.13G134300 hypothetical protein NA 1Chr13:24664171–24665742 (-)2.484e-11
Glyma.13G134500 hypothetical protein AT3G09560:PAH1:Lipin family protein 1Chr13:24696109–24705068 (-)7.233e-11
Glyma.13G135300 hypothetical protein NA 1Chr13:24770681–24773826 (+)2.025e-11
Glyma.13G135400 hypothetical protein AT5G12130:PDE149:integral membrane TerC family protein 1Chr13:24786242–24791938 (+)2.025e-11
Glyma.13G135500 hypothetical protein AT5G02780:GSTL1:glutathione transferase lambda 1 1Chr13:24798567–24801567 (+)4.193e-11
Glyma.13G203200 hypothetical protein AT3G52105:AT3G52105:DIS3-exonuclease-like protein 1Chr13:31720004–31725252 (+)4.888e-11
Glyma.13G203600 hypothetical protein AT5G13490:AAC2:ADP/ATP carrier 2 1Chr13:31753843–31756013 (-)3.239e-11
Glyma.13G237900 hypothetical protein NA 1Chr13:34809361–34816888 (-)1.501e-11
Glyma.14G068500 hypothetical protein NA 1Chr14:5741909–5745574 (-)5.89e-11
Glyma.14G069500 hypothetical protein AT5G37810:NIP4;1:NOD26-like intrinsic protein 4;1 1Chr14:5822246–5825628 (-)4.618e-14
Glyma.14G094200 hypothetical protein AT5G11840:AT5G11840:YCF36, putative (DUF1230) 1Chr14:8770378–8774149 (-)1.145e-11
Glyma.14G094300 hypothetical protein NA 1Chr14:8771316–8772515 (+)1.145e-11
Glyma.14G094900 hypothetical protein AT1G60960:IRT3:iron regulated transporter 3 1Chr14:8824846–8827258 (-)7.958e-14
Glyma.14G148800 hypothetical protein AT1G44760:AT1G44760:Adenine nucleotide alpha hydrolases-like superfamily protein 1Chr14:32154755–32157298 (+)9.562e-17
Glyma.14G149000 hypothetical protein NA 1Chr14:32164321–32167686 (+)8.115e-11
Glyma.14G150000 hypothetical protein AT1G21830:AT1G21830:uncharacterized protein 1Chr14:32314092–32316626 (+)9.566e-11
Glyma.15G124500 MLO-like protein 13 AT4G24250:MLO13:Seven transmembrane MLO family protein 1Chr15:9888761–9894068 (-)3.223e-12
Glyma.15G256300 hypothetical protein NA 1Chr15:48546007–48547401 (-)2.027e-15
Glyma.15G275100 hypothetical protein AT5G42470:AT5G42470:BRCA1-A complex subunit BRE-like protein 1Chr15:51350998–51355557 (-)2.643e-12
Glyma.16G117400 hypothetical protein NA 1Chr16:26234552–26238233 (-)3.272e-11
Glyma.16G118100 hypothetical protein AT2G17570:cPT1:Undecaprenyl pyrophosphate synthetase family protein 1Chr16:26324650–26336836 (+)3.27e-12
Glyma.16G119400 hypothetical protein NA 1Chr16:26684278–26687087 (+)4.14e-13
Glyma.16G139500 hypothetical protein AT5G66550:AT5G66550:Maf-like protein 1Chr16:29686243–29690410 (-)8.209e-11
Glyma.16G160900 hypothetical protein NA 1Chr16:32013447–32016235 (+)3.69e-12
Glyma.16G181300 hypothetical protein NA 1Chr16:34225053–34233073 (-)2.26e-11
Glyma.16G198600 hypothetical protein AT5G52060:BAG1:BCL-2-associated athano 1 1Chr16:35958085–35960833 (+)4.858e-12
Glyma.16G209300 hypothetical protein NA 1Chr16:36856833–36863994 (-)2.25e-11
Glyma.18G073500 hypothetical protein AT3G44730:KP1:kinesin-like protein 1 1Chr18:6971929–6982758 (+)8.226e-11
Glyma.18G112600 hypothetical protein NA 1Chr18:13398219–13405422 (+)1.464e-11
Glyma.18G227400 hypothetical protein AT2G45720:AT2G45720:ARM repeat superfamily protein 1Chr18:51650951–51654636 (-)8.57e-11
Glyma.19G012100 hypothetical protein AT3G28150:TBL22:TRICHOME BIREFRINGENCE-LIKE 22 1Chr19:1155711–1161298 (-)1.28e-11
Glyma.19G012300 hypothetical protein NA 1Chr19:1165111–1173031 (-)1.28e-11
Glyma.19G127500 hypothetical protein NA 1Chr19:38615244–38616720 (-)5.537e-11
Glyma.19G188200 hypothetical protein NA 1Chr19:44647446–44649620 (-)3.298e-14
Glyma.19G216500 hypothetical protein AT3G62390:TBL6:TRICHOME BIREFRINGENCE-LIKE 6 1Chr19:46951591–46954520 (+)7.908e-12
Glyma.19G218100 hypothetical protein AT1G02390:GPAT2:glycerol-3-phosphate acyltransferase 2 1Chr19:47082133–47085750 (+)2.189e-14