Soybean mGWAS DBExplore The Genetic Basis Of Soybean Metabolism Glycine max
Overview Annotation GWAS Evidence Associated genes

P20143

Metabolite ID
P20143
Deionized mass
193.0733 Da
Average m/z
194.0814
Average RT
13.2261
Adduct
[M+H]+
Association scope
Overlapping genes only
Associated genes
72
GWAS result file
Available
Open in Soybean Metabolome Repository

Candidate annotations

Search compound candidates by deionized mass and tolerance. Follow compound IDs for database records, or use name searches to explore chemistry and soybean literature. About candidate annotations

GWAS Evidence

Dataset: indexed GWAS records.

Settings

SNP counts, plot highlights, gene associations and downloads use P < 10⁻¹⁰. Changing the threshold updates this page together.

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Associated genes

72 genes linked to SNP records with P < 10⁻¹⁰ in the selected scope. Supporting SNP records are counted per feature–gene pair.

Gene ID Alias Description Arabidopsis ortholog Supporting SNP recordsGene interval (1-based)Minimum P
Glyma.16G209300 hypothetical protein NA 5Chr16:36856833–36863994 (-)4e-13
Glyma.16G111500 hypothetical protein AT4G35500:AT4G35500:Protein kinase superfamily protein 4Chr16:24626024–24635513 (+)4.923e-12
Glyma.16G196800 hypothetical protein AT5G07250:RBL3:RHOMBOID-like protein 3 4Chr16:35831912–35835153 (+)4.54e-14
Glyma.16G196900 hypothetical protein NA 4Chr16:35841279–35846894 (-)3.754e-13
Glyma.13G134400 hypothetical protein AT2G37370:AT2G37370:centrosomal protein of 135 kDa-like protein 3Chr13:24677399–24693129 (-)3.477e-12
Glyma.17G217900 hypothetical protein NA 3Chr17:36771760–36778616 (-)2.401e-11
Glyma.17G218600 hypothetical protein NA 3Chr17:36975400–36982812 (-)4.61e-11
Glyma.06G313500 hypothetical protein NA 2Chr06:50191600–50203098 (-)8.33e-13
Glyma.12G204400 hypothetical protein AT4G03560:TPC1:two-pore channel 1 2Chr12:36473422–36498915 (+)1.192e-15
Glyma.14G093100 hypothetical protein NA 2Chr14:8654730–8655892 (-)3.412e-15
Glyma.01G117000 hypothetical protein NA 1Chr01:40366281–40370122 (+)2.051e-11
Glyma.01G117200 hypothetical protein NA 1Chr01:40497525–40501709 (-)2.051e-11
Glyma.01G121400 hypothetical protein AT5G01400:ESP4:HEAT repeat-containing protein 1Chr01:41808055–41828625 (-)2.103e-11
Glyma.01G123900 hypothetical protein AT3G51770:ETO1:tetratricopeptide repeat (TPR)-containing protein 1Chr01:42831758–42837350 (+)9.104e-11
Glyma.01G124100 hypothetical protein NA 1Chr01:42886229–42892204 (-)5.18e-13
Glyma.01G169700 hypothetical protein AT4G36410:UBC17:ubiquitin-conjugating enzyme 17 1Chr01:50715084–50719427 (-)3.514e-12
Glyma.01G169800 hypothetical protein AT4G36400:D2HGDH:FAD-linked oxidases family protein 1Chr01:50726088–50733347 (-)3.514e-12
Glyma.03G023000 hypothetical protein AT4G00220:JLO:Lateral organ boundaries (LOB) domain family protein 1Chr03:2423540–2428634 (-)2.499e-13
Glyma.03G242800 hypothetical protein AT4G08630:AT4G08630:fas-binding factor-like protein 1Chr03:44064511–44073939 (+)1.9e-11
Glyma.04G096300 hypothetical protein NA 1Chr04:8635554–8654734 (+)3.936e-11
Glyma.05G236400 hypothetical protein AT1G23210:GH9B6:glycosyl hydrolase 9B6__AT1G70710:GH9B1:glycosyl hydrolase 9B1 1Chr05:41274513–41279615 (-)1.054e-17
Glyma.05G236700 hypothetical protein AT4G33760:AT4G33760:tRNA synthetase class II (D, K and N) family protein 1Chr05:41301540–41310727 (+)1.575e-19
Glyma.05G237800 hypothetical protein AT1G48790:AMSH1:associated molecule with the SH3 domain of STAM 1 1Chr05:41406807–41413022 (-)5.168e-21
Glyma.06G315100 hypothetical protein AT5G04930:ALA1:aminophospholipid ATPase 1 1Chr06:50401945–50408153 (+)3.079e-11
Glyma.08G202000 hypothetical protein AT1G52150:ATHB-15:Homeobox-leucine zipper family protein / lipid-binding START domain-containing protein 1Chr08:16375907–16384294 (-)5.26e-12
Glyma.09G058900 hypothetical protein NA 1Chr09:5397968–5404650 (-)8.912e-11
Glyma.09G084300 hypothetical protein AT2G34680:AIR9:Outer arm dynein light chain 1 protein 1Chr09:10129602–10197250 (-)7.793e-11
Glyma.10G078700 hypothetical protein NA 1Chr10:8882318–8903950 (+)2.411e-12
Glyma.10G079100 hypothetical protein NA 1Chr10:8960669–8962364 (-)2.411e-12
Glyma.10G079800 hypothetical protein NA 1Chr10:9223520–9228511 (-)2.411e-12
Glyma.10G080000 hypothetical protein AT3G11660:NHL1:NDR1/HIN1-like 1__AT3G52470:AT3G52470:Late embryosis abundant (LEA) hydroxyproline-rich glycoprotein fam… 1Chr10:9258476–9260697 (-)2.411e-12
Glyma.10G081200 hypothetical protein NA 1Chr10:9600771–9603988 (-)1.829e-12
Glyma.10G081700 hypothetical protein NA 1Chr10:9752508–9758422 (+)7.276e-12
Glyma.11G048300 hypothetical protein AT4G37640:ACA2:calcium ATPase 2 1Chr11:3601241–3607177 (+)2.725e-12
Glyma.11G127100 hypothetical protein AT1G06040:STO:B-box zinc finger family protein 1Chr11:9656242–9659517 (+)2.169e-11
Glyma.11G127200 hypothetical protein AT3G59480:AT3G59480:pfkB-like carbohydrate kinase family protein 1Chr11:9660434–9665570 (-)2.169e-11
Glyma.11G127300 hypothetical protein AT2G28480:AT2G28480:RNA-binding CRS1 / YhbY (CRM) domain protein 1Chr11:9667918–9671917 (-)2.169e-11
Glyma.12G054700 hypothetical protein AT3G45140:LOX2:lipoxygenase 2 1Chr12:3949453–3957386 (-)2.822e-11
Glyma.12G203600 EXPB8 AT2G20750:EXPB1:expansin B1 1Chr12:36390283–36394245 (-)7.509e-11
Glyma.12G204000 hypothetical protein AT1G03687:AT1G03687:DTW domain-containing protein 1Chr12:36428558–36432835 (+)1.192e-15
Glyma.12G204600 hypothetical protein AT4G28310:AT4G28310:microtubule-associated protein 1Chr12:36504234–36505245 (+)4.049e-13
Glyma.13G134300 hypothetical protein NA 1Chr13:24664171–24665742 (-)3.587e-12
Glyma.13G134500 hypothetical protein AT3G09560:PAH1:Lipin family protein 1Chr13:24696109–24705068 (-)3.477e-12
Glyma.13G156000 hypothetical protein AT2G07560:HA6:H[+]-ATPase 6__AT3G42640:HA8:H[+]-ATPase 8 1Chr13:27104338–27109785 (+)7.979e-11
Glyma.13G161900 PAP25 purple acid phosphatase AT5G34850:PAP26:purple acid phosphatase 26 1Chr13:27748190–27752685 (-)1.023e-12
Glyma.13G201600 hypothetical protein NA 1Chr13:31521512–31522992 (+)1.337e-12
Glyma.13G203200 hypothetical protein AT3G52105:AT3G52105:DIS3-exonuclease-like protein 1Chr13:31720004–31725252 (+)4.952e-11
Glyma.13G203300 hypothetical protein AT3G63530:BB:RING/U-box superfamily protein 1Chr13:31727841–31735910 (-)4.952e-11
Glyma.13G203700 hypothetical protein NA 1Chr13:31780982–31784218 (+)4.952e-11
Glyma.13G203900 hypothetical protein NA 1Chr13:31793697–31796601 (-)1.997e-12
Glyma.15G124500 MLO-like protein 13 AT4G24250:MLO13:Seven transmembrane MLO family protein 1Chr15:9888761–9894068 (-)6.966e-11
Glyma.15G275100 hypothetical protein AT5G42470:AT5G42470:BRCA1-A complex subunit BRE-like protein 1Chr15:51350998–51355557 (-)6.875e-11
Glyma.16G106300 hypothetical protein AT5G23900:AT5G23900:Ribosomal protein L13e family protein 1Chr16:21495147–21497932 (+)7.605e-11
Glyma.16G111100 hypothetical protein NA 1Chr16:24438458–24444801 (+)4.923e-12
Glyma.16G111400 hypothetical protein AT4G35510:AT4G35510:PHD finger-like protein 1Chr16:24546422–24549336 (+)8.296e-11
Glyma.16G189100 hypothetical protein AT1G05190:emb2394:Ribosomal protein L6 family 1Chr16:35170253–35173950 (-)3.025e-12
Glyma.16G196200 HSF-32 heat stress transcription factor 32 AT5G62020:HSFB2A:heat shock transcription factor B2A 1Chr16:35760178–35761852 (+)1.484e-12
Glyma.16G208500 EIF6 AT3G55620:eIF6A:Translation initiation factor IF6 1Chr16:36806718–36809299 (+)1.947e-12
Glyma.16G210300 hypothetical protein AT1G73340:AT1G73340:Cytochrome P450 superfamily protein 1Chr16:36943073–36948828 (+)1.281e-12
Glyma.16G210400 hypothetical protein AT1G73350:AT1G73350:ankyrin repeat protein 1Chr16:36949685–36953467 (+)1.281e-12
Glyma.17G215200 hypothetical protein NA 1Chr17:36125880–36142936 (+)9.741e-12
Glyma.17G215400 hypothetical protein NA 1Chr17:36163614–36164915 (+)1.959e-11
Glyma.17G215500 KNAT5 NA 1Chr17:36212363–36217688 (-)2.907e-12
Glyma.17G218700 hypothetical protein NA 1Chr17:36986191–36991558 (-)4.61e-11
Glyma.18G025700 hypothetical protein AT3G11110:AT3G11110:RING/U-box superfamily protein 1Chr18:1911249–1912730 (+)1.924e-12
Glyma.18G055400 hypothetical protein NA 1Chr18:4824726–4828902 (+)8.275e-12
Glyma.18G108400 hypothetical protein NA 1Chr18:12370997–12390275 (-)4.834e-11
Glyma.18G112600 hypothetical protein NA 1Chr18:13398219–13405422 (+)2.512e-11
Glyma.18G266100 hypothetical protein NA 1Chr18:55052591–55056489 (-)1.225e-12
Glyma.19G009400 hypothetical protein AT5G40270:AT5G40270:HD domain-containing metal-dependent phosphohydrolase family protein 1Chr19:885045–893253 (+)3.193e-11
Glyma.20G114400 hypothetical protein AT1G68585:AT1G68585:uncharacterized protein 1Chr20:35614355–35616709 (-)6.767e-11
Glyma.20G120200 hypothetical protein NA 1Chr20:36268998–36282456 (-)2.592e-14