Soybean mGWAS DBExplore The Genetic Basis Of Soybean Metabolism Glycine max
Overview Annotation GWAS Evidence Associated genes

P19699

Metabolite ID
P19699
Deionized mass
333.5523 Da
Average m/z
334.5591
Average RT
13.0987
Adduct
[M+H]+
Association scope
Overlapping genes only
Associated genes
47
GWAS result file
Available
Open in Soybean Metabolome Repository

Candidate annotations

Search compound candidates by deionized mass and tolerance. Follow compound IDs for database records, or use name searches to explore chemistry and soybean literature. About candidate annotations

GWAS Evidence

Dataset: indexed GWAS records.

Settings

SNP counts, plot highlights, gene associations and downloads use P < 10⁻¹⁰. Changing the threshold updates this page together.

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Associated genes

47 genes linked to SNP records with P < 10⁻¹⁰ in the selected scope. Supporting SNP records are counted per feature–gene pair.

Gene ID Alias Description Arabidopsis ortholog Supporting SNP recordsGene interval (1-based)Minimum P
Glyma.16G137600 hypothetical protein NA 3Chr16:29468438–29472890 (-)3.757e-13
Glyma.16G147900 hypothetical protein NA 3Chr16:30864919–30872425 (+)5.78e-11
Glyma.07G021800 hypothetical protein AT1G80920:J8:Chaperone DnaJ-domain superfamily protein 2Chr07:1697119–1698666 (+)1.565e-11
Glyma.14G201600 hypothetical protein NA 2Chr14:46703283–46706500 (+)1.067e-14
Glyma.17G215800 Aberrant root formation protein 4 AT5G11030:ALF4:aberrant root formation protein 2Chr17:36328551–36338097 (+)5.278e-11
Glyma.03G023000 hypothetical protein AT4G00220:JLO:Lateral organ boundaries (LOB) domain family protein 1Chr03:2423540–2428634 (-)1.142e-11
Glyma.05G124700 hypothetical protein NA 1Chr05:31807311–31817648 (+)5.302e-11
Glyma.05G127500 hypothetical protein NA 1Chr05:32041345–32049554 (+)9.424e-11
Glyma.06G125200 hypothetical protein AT4G27940:MTM1:manganese tracking factor for mitochondrial SOD2 1Chr06:10209787–10215982 (+)3.955e-13
Glyma.06G125300 hypothetical protein AT5G24105:AGP41:arabinogalactan protein 41 1Chr06:10216506–10218901 (-)3.955e-13
Glyma.06G291800 hypothetical protein NA 1Chr06:48044194–48047197 (-)1.454e-11
Glyma.06G292200 hypothetical protein AT5G44290:AT5G44290:Protein kinase superfamily protein 1Chr06:48100578–48107433 (-)1.454e-11
Glyma.07G015700 hypothetical protein AT1G79750:NADP-ME4:NADP-malic enzyme 4 1Chr07:1244977–1251198 (-)1.979e-12
Glyma.07G017600 hypothetical protein NA 1Chr07:1415837–1422680 (+)1.154e-11
Glyma.07G021700 hypothetical protein NA 1Chr07:1684537–1692320 (+)3.589e-11
Glyma.09G080200 hypothetical protein NA 1Chr09:9256042–9263239 (-)6.191e-12
Glyma.09G082000 hypothetical protein NA 1Chr09:9638564–9650178 (+)2.158e-11
Glyma.11G119600 hypothetical protein AT2G16130:PMT2:polyol/monosaccharide transporter 2 1Chr11:9127497–9129972 (-)7.915e-11
Glyma.11G125600 hypothetical protein AT2G46200:AT2G46200:U11/U12 small nuclear ribonucleoprotein 1Chr11:9540747–9545520 (-)5.02e-13
Glyma.11G127100 hypothetical protein AT1G06040:STO:B-box zinc finger family protein 1Chr11:9656242–9659517 (+)1.07e-13
Glyma.11G127200 hypothetical protein AT3G59480:AT3G59480:pfkB-like carbohydrate kinase family protein 1Chr11:9660434–9665570 (-)1.07e-13
Glyma.11G127300 hypothetical protein AT2G28480:AT2G28480:RNA-binding CRS1 / YhbY (CRM) domain protein 1Chr11:9667918–9671917 (-)1.07e-13
Glyma.12G108600 hypothetical protein NA 1Chr12:9994609–9997302 (-)5.271e-11
Glyma.12G109500 hypothetical protein AT4G03415:PP2C52:Protein phosphatase 2C family protein 1Chr12:10308026–10314332 (-)5.271e-11
Glyma.12G202200 hypothetical protein AT2G20860:LIP1:lipoic acid synthase 1 1Chr12:36267599–36271584 (+)1.318e-12
Glyma.12G202300 hypothetical protein NA 1Chr12:36275438–36276838 (+)1.318e-12
Glyma.12G203600 EXPB8 AT2G20750:EXPB1:expansin B1 1Chr12:36390283–36394245 (-)3.687e-13
Glyma.12G203700 hypothetical protein AT4G28260:AT4G28260:acyl-UDP-N-acetylglucosamine O-acyltransferase 1Chr12:36406747–36413696 (+)4.302e-11
Glyma.14G201700 hypothetical protein NA 1Chr14:46711634–46715644 (-)1.067e-14
Glyma.15G121100 hypothetical protein NA 1Chr15:9567797–9570248 (+)2.114e-11
Glyma.15G121300 hypothetical protein AT5G47760:PGLP2:2-phosphoglycolate phosphatase 2 1Chr15:9584685–9590201 (-)2.756e-11
Glyma.15G121500 hypothetical protein AT1G03370:AT1G03370:C2 calcium/lipid-binding and GRAM domain containing protein 1Chr15:9602794–9615281 (+)2.114e-11
Glyma.15G121800 hypothetical protein NA 1Chr15:9643746–9648073 (+)2.114e-11
Glyma.15G124000 hypothetical protein NA 1Chr15:9845097–9849312 (-)8.437e-12
Glyma.15G124500 MLO-like protein 13 AT4G24250:MLO13:Seven transmembrane MLO family protein 1Chr15:9888761–9894068 (-)1.165e-11
Glyma.16G134900 hypothetical protein AT5G66470:AT5G66470:GTP-binding protein Era-like protein 1Chr16:29214758–29219443 (-)4.041e-11
Glyma.16G139000 hypothetical protein NA 1Chr16:29623540–29631451 (+)2.691e-11
Glyma.16G139500 hypothetical protein AT5G66550:AT5G66550:Maf-like protein 1Chr16:29686243–29690410 (-)2.939e-15
Glyma.16G145100 hypothetical protein NA 1Chr16:30578388–30581421 (-)1.076e-11
Glyma.16G145600 hypothetical protein AT1G11310:MLO2:Seven transmembrane MLO family protein__AT2G39200:MLO12:Seven transmembrane MLO family protein__AT1G6156… 1Chr16:30652378–30659548 (+)1.076e-11
Glyma.16G179800 hypothetical protein AT5G52520:OVA6:Class II aaRS and biotin synthetases superfamily protein 1Chr16:34022480–34027055 (-)1.48e-11
Glyma.17G064000 hypothetical protein AT2G18840:AT2G18840:Integral membrane Yip1 family protein__AT4G30260:AT4G30260:Integral membrane Yip1 family protein 1Chr17:4924830–4930155 (-)6.654e-11
Glyma.17G064200 hypothetical protein AT5G57500:AT5G57500:Galactosyltransferase family protein 1Chr17:4943412–4944357 (-)6.654e-11
Glyma.17G215500 KNAT5 NA 1Chr17:36212363–36217688 (-)6.081e-11
Glyma.17G215700 hypothetical protein AT5G11040:TRS120:TRS120 1Chr17:36319785–36329259 (-)5.278e-11
Glyma.18G263900 hypothetical protein AT5G15410:DND1:Cyclic nucleotide-regulated ion channel family protein 1Chr18:54907058–54912936 (-)7.879e-11
Glyma.18G266500 hypothetical protein NA 1Chr18:55088284–55091427 (-)1.819e-11