Soybean mGWAS DBExplore The Genetic Basis Of Soybean Metabolism Glycine max
Overview Annotation GWAS Evidence Associated genes

P19424

Metabolite ID
P19424
Deionized mass
194.0916 Da
Average m/z
195.1003
Average RT
13.0451
Adduct
[M+H]+
Association scope
Overlapping genes only
Associated genes
63
GWAS result file
Available
Open in Soybean Metabolome Repository

Candidate annotations

Search compound candidates by deionized mass and tolerance. Follow compound IDs for database records, or use name searches to explore chemistry and soybean literature. About candidate annotations

GWAS Evidence

Dataset: indexed GWAS records.

Settings

SNP counts, plot highlights, gene associations and downloads use P < 10⁻¹⁰. Changing the threshold updates this page together.

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Associated genes

63 genes linked to SNP records with P < 10⁻¹⁰ in the selected scope. Supporting SNP records are counted per feature–gene pair.

Gene ID Alias Description Arabidopsis ortholog Supporting SNP recordsGene interval (1-based)Minimum P
Glyma.08G117700 hypothetical protein NA 2Chr08:9080318–9084658 (-)5.366e-11
Glyma.16G111500 hypothetical protein AT4G35500:AT4G35500:Protein kinase superfamily protein 2Chr16:24626024–24635513 (+)7.168e-12
Glyma.17G215800 Aberrant root formation protein 4 AT5G11030:ALF4:aberrant root formation protein 2Chr17:36328551–36338097 (+)8.046e-12
Glyma.01G169700 hypothetical protein AT4G36410:UBC17:ubiquitin-conjugating enzyme 17 1Chr01:50715084–50719427 (-)1.215e-11
Glyma.01G169800 hypothetical protein AT4G36400:D2HGDH:FAD-linked oxidases family protein 1Chr01:50726088–50733347 (-)1.215e-11
Glyma.03G023000 hypothetical protein AT4G00220:JLO:Lateral organ boundaries (LOB) domain family protein 1Chr03:2423540–2428634 (-)2.316e-13
Glyma.03G036800 TBP1 AT3G13445:TBP1:TATA binding protein 1 1Chr03:4472672–4477787 (-)2.078e-11
Glyma.03G124500 hypothetical protein NA 1Chr03:33758928–33762195 (+)6.259e-11
Glyma.03G147400 hypothetical protein NA 1Chr03:36293698–36295294 (+)5.369e-12
Glyma.04G116900 hypothetical protein NA 1Chr04:13696275–13700803 (+)1.324e-12
Glyma.05G164700 hypothetical protein NA 1Chr05:35543931–35549196 (-)3.31e-11
Glyma.05G236400 hypothetical protein AT1G23210:GH9B6:glycosyl hydrolase 9B6__AT1G70710:GH9B1:glycosyl hydrolase 9B1 1Chr05:41274513–41279615 (-)1.604e-15
Glyma.05G236700 hypothetical protein AT4G33760:AT4G33760:tRNA synthetase class II (D, K and N) family protein 1Chr05:41301540–41310727 (+)3.389e-16
Glyma.05G237800 hypothetical protein AT1G48790:AMSH1:associated molecule with the SH3 domain of STAM 1 1Chr05:41406807–41413022 (-)2.852e-13
Glyma.08G016700 hypothetical protein AT1G63840:AT1G63840:RING/U-box superfamily protein 1Chr08:1330226–1331366 (-)1.57e-11
Glyma.08G118500 hypothetical protein NA 1Chr08:9161382–9162471 (+)4.607e-12
Glyma.08G119300 hypothetical protein AT1G29330:ERD2:ER lumen protein retaining receptor family protein 1Chr08:9198213–9201688 (-)2.233e-12
Glyma.08G139300 hypothetical protein AT2G22125:CSI1:binding protein 1Chr08:10653279–10664544 (-)7.367e-11
Glyma.09G249500 hypothetical protein NA 1Chr09:47056885–47062577 (+)3.472e-15
Glyma.09G251800 hypothetical protein AT1G65380:CLV2:Leucine-rich repeat (LRR) family protein 1Chr09:47220796–47224266 (+)1.05e-13
Glyma.09G252000 hypothetical protein AT2G40730:CTEXP:kinase family with ARM repeat domain-containing protein 1Chr09:47233101–47242848 (+)1.069e-12
Glyma.09G252300 hypothetical protein AT5G16520:AT5G16520:uncharacterized protein 1Chr09:47254519–47261787 (-)1.069e-12
Glyma.10G081700 hypothetical protein NA 1Chr10:9752508–9758422 (+)8.974e-11
Glyma.11G048300 hypothetical protein AT4G37640:ACA2:calcium ATPase 2 1Chr11:3601241–3607177 (+)4.247e-11
Glyma.11G240600 hypothetical protein NA 1Chr11:33491895–33493311 (+)2.106e-11
Glyma.12G049300 hypothetical protein NA 1Chr12:3538428–3539170 (-)1.971e-11
Glyma.12G108600 hypothetical protein NA 1Chr12:9994609–9997302 (-)8.33e-11
Glyma.12G109500 hypothetical protein AT4G03415:PP2C52:Protein phosphatase 2C family protein 1Chr12:10308026–10314332 (-)8.33e-11
Glyma.12G114500 hypothetical protein AT4G22930:PYR4:pyrimidin 4 1Chr12:11396572–11400825 (-)2.855e-11
Glyma.12G114900 hypothetical protein NA 1Chr12:11457987–11462951 (-)2.855e-11
Glyma.12G183400 hypothetical protein NA 1Chr12:34427496–34440319 (-)6.982e-11
Glyma.13G201600 hypothetical protein NA 1Chr13:31521512–31522992 (+)2.572e-11
Glyma.15G121100 hypothetical protein NA 1Chr15:9567797–9570248 (+)3.239e-14
Glyma.15G121300 hypothetical protein AT5G47760:PGLP2:2-phosphoglycolate phosphatase 2 1Chr15:9584685–9590201 (-)4.929e-14
Glyma.15G121500 hypothetical protein AT1G03370:AT1G03370:C2 calcium/lipid-binding and GRAM domain containing protein 1Chr15:9602794–9615281 (+)3.239e-14
Glyma.15G121800 hypothetical protein NA 1Chr15:9643746–9648073 (+)3.239e-14
Glyma.15G124000 hypothetical protein NA 1Chr15:9845097–9849312 (-)3.222e-11
Glyma.15G124500 MLO-like protein 13 AT4G24250:MLO13:Seven transmembrane MLO family protein 1Chr15:9888761–9894068 (-)4.387e-12
Glyma.16G106300 hypothetical protein AT5G23900:AT5G23900:Ribosomal protein L13e family protein 1Chr16:21495147–21497932 (+)1.648e-11
Glyma.16G111100 hypothetical protein NA 1Chr16:24438458–24444801 (+)7.168e-12
Glyma.16G137600 hypothetical protein NA 1Chr16:29468438–29472890 (-)7.748e-12
Glyma.16G139000 hypothetical protein NA 1Chr16:29623540–29631451 (+)1.606e-11
Glyma.16G139500 hypothetical protein AT5G66550:AT5G66550:Maf-like protein 1Chr16:29686243–29690410 (-)1.778e-14
Glyma.16G144100 hypothetical protein NA 1Chr16:30432951–30434052 (-)2.776e-11
Glyma.16G144700 hypothetical protein AT5G66960:AT5G66960:Prolyl oligopeptidase family protein 1Chr16:30514629–30519598 (+)9.758e-11
Glyma.16G145100 hypothetical protein NA 1Chr16:30578388–30581421 (-)1.452e-12
Glyma.16G145600 hypothetical protein AT1G11310:MLO2:Seven transmembrane MLO family protein__AT2G39200:MLO12:Seven transmembrane MLO family protein__AT1G6156… 1Chr16:30652378–30659548 (+)1.452e-12
Glyma.16G147000 hypothetical protein NA 1Chr16:30773803–30777822 (-)1.865e-11
Glyma.16G179800 hypothetical protein AT5G52520:OVA6:Class II aaRS and biotin synthetases superfamily protein 1Chr16:34022480–34027055 (-)1.446e-11
Glyma.16G182600 hypothetical protein AT5G52400:CYP715A1:cytochrome P450, family 715, subfamily A, polypeptide 1 1Chr16:34364037–34367765 (-)7.163e-11
Glyma.16G208500 EIF6 AT3G55620:eIF6A:Translation initiation factor IF6 1Chr16:36806718–36809299 (+)9.094e-11
Glyma.16G209300 hypothetical protein NA 1Chr16:36856833–36863994 (-)3.546e-11
Glyma.16G210300 hypothetical protein AT1G73340:AT1G73340:Cytochrome P450 superfamily protein 1Chr16:36943073–36948828 (+)1.345e-11
Glyma.16G210400 hypothetical protein AT1G73350:AT1G73350:ankyrin repeat protein 1Chr16:36949685–36953467 (+)1.345e-11
Glyma.17G212300 hypothetical protein AT5G25310:AT5G25310:Exostosin family protein 1Chr17:35122156–35129564 (-)3.582e-11
Glyma.17G215500 KNAT5 NA 1Chr17:36212363–36217688 (-)1.091e-12
Glyma.17G215700 hypothetical protein AT5G11040:TRS120:TRS120 1Chr17:36319785–36329259 (-)8.046e-12
Glyma.18G230700 hypothetical protein AT3G61290:AT3G61290:O-glucosyltransferase rumi-like protein (DUF821) 1Chr18:51943730–51947645 (+)9.854e-12
Glyma.18G266100 hypothetical protein NA 1Chr18:55052591–55056489 (-)2.465e-11
Glyma.18G266500 hypothetical protein NA 1Chr18:55088284–55091427 (-)1.119e-12
Glyma.19G187900 hypothetical protein AT2G36720:AT2G36720:Acyl-CoA N-acyltransferase with RING/FYVE/PHD-type zinc finger domain-containing protein 1Chr19:44599748–44609219 (-)1.065e-16
Glyma.19G188200 hypothetical protein NA 1Chr19:44647446–44649620 (-)2.87e-11
Glyma.20G019800 hypothetical protein AT1G49350:AT1G49350:pfkB-like carbohydrate kinase family protein 1Chr20:2051817–2057262 (+)4.419e-11