Soybean mGWAS DBExplore The Genetic Basis Of Soybean Metabolism Glycine max
Overview Annotation GWAS Evidence Associated genes

P18870

Metabolite ID
P18870
Deionized mass
1156.3299 Da
Average m/z
1157.3355
Average RT
12.8662
Adduct
[M+H]+
Association scope
Overlapping genes only
Associated genes
60
GWAS result file
Available
Open in Soybean Metabolome Repository

Candidate annotations

Search compound candidates by deionized mass and tolerance. Follow compound IDs for database records, or use name searches to explore chemistry and soybean literature. About candidate annotations

GWAS Evidence

Dataset: indexed GWAS records.

Settings

SNP counts, plot highlights, gene associations and downloads use P < 10⁻¹⁰. Changing the threshold updates this page together.

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Associated genes

60 genes linked to SNP records with P < 10⁻¹⁰ in the selected scope. Supporting SNP records are counted per feature–gene pair.

Gene ID Alias Description Arabidopsis ortholog Supporting SNP recordsGene interval (1-based)Minimum P
Glyma.14G067800 hypothetical protein AT3G12380:ARP5:actin-related protein 5 2Chr14:5675792–5680343 (+)1.044e-12
Glyma.16G146700 hypothetical protein NA 2Chr16:30755899–30759360 (-)2.289e-11
Glyma.17G215800 Aberrant root formation protein 4 AT5G11030:ALF4:aberrant root formation protein 2Chr17:36328551–36338097 (+)4.305e-11
Glyma.01G021600 hypothetical protein AT5G65540:AT5G65540:transcription initiation factor TFIID subunit 1Chr01:2189923–2194362 (-)4.74e-11
Glyma.01G021700 hypothetical protein NA 1Chr01:2197811–2200232 (+)8.588e-11
Glyma.01G022000 hypothetical protein NA 1Chr01:2209688–2210849 (-)8.588e-11
Glyma.01G022200 hypothetical protein NA 1Chr01:2212834–2213622 (+)8.588e-11
Glyma.01G022300 hypothetical protein NA 1Chr01:2215383–2217438 (+)1.412e-11
Glyma.01G022800 hypothetical protein AT5G65490:AT5G65490:suppressor-like protein 1Chr01:2296901–2303966 (+)9.012e-11
Glyma.01G169700 hypothetical protein AT4G36410:UBC17:ubiquitin-conjugating enzyme 17 1Chr01:50715084–50719427 (-)4.788e-11
Glyma.01G169800 hypothetical protein AT4G36400:D2HGDH:FAD-linked oxidases family protein 1Chr01:50726088–50733347 (-)4.788e-11
Glyma.03G023000 hypothetical protein AT4G00220:JLO:Lateral organ boundaries (LOB) domain family protein 1Chr03:2423540–2428634 (-)9.787e-11
Glyma.03G147400 hypothetical protein NA 1Chr03:36293698–36295294 (+)4.057e-11
Glyma.03G209700 hypothetical protein NA 1Chr03:41646792–41648527 (+)8.44e-12
Glyma.04G190700 hypothetical protein NA 1Chr04:46143583–46146881 (+)4.692e-11
Glyma.04G190800 hypothetical protein AT5G07460:PMSR2:peptidemethionine sulfoxide reductase 2 1Chr04:46143080–46147709 (-)4.692e-11
Glyma.05G236400 hypothetical protein AT1G23210:GH9B6:glycosyl hydrolase 9B6__AT1G70710:GH9B1:glycosyl hydrolase 9B1 1Chr05:41274513–41279615 (-)4.025e-12
Glyma.05G236700 hypothetical protein AT4G33760:AT4G33760:tRNA synthetase class II (D, K and N) family protein 1Chr05:41301540–41310727 (+)6.392e-12
Glyma.06G078400 hypothetical protein AT4G31290:AT4G31290:ChaC-like family protein 1Chr06:6068728–6071360 (+)2.669e-13
Glyma.06G079400 hypothetical protein NA 1Chr06:6105463–6107101 (+)3.972e-14
Glyma.06G112300 hypothetical protein AT1G44780:AT1G44780:translation initiation factor__AT4G08310:AT4G08310:DNA ligase 1Chr06:9113982–9118848 (-)1.895e-11
Glyma.06G112600 hypothetical protein AT1G77620:AT1G77620:P-loop containing nucleoside triphosphate hydrolases superfamily protein 1Chr06:9134358–9144986 (+)1.895e-11
Glyma.06G112700 hypothetical protein AT1G44760:AT1G44760:Adenine nucleotide alpha hydrolases-like superfamily protein 1Chr06:9156973–9158659 (+)1.895e-11
Glyma.08G016700 hypothetical protein AT1G63840:AT1G63840:RING/U-box superfamily protein 1Chr08:1330226–1331366 (-)2.118e-11
Glyma.08G114700 hypothetical protein AT3G13600:AT3G13600:calmodulin-binding family protein 1Chr08:8768854–8772973 (-)1.637e-11
Glyma.08G150100 hypothetical protein AT2G44450:BGLU15:beta glucosidase 15 1Chr08:11525692–11536927 (+)4.965e-11
Glyma.09G080200 hypothetical protein NA 1Chr09:9256042–9263239 (-)9.01e-12
Glyma.09G082000 hypothetical protein NA 1Chr09:9638564–9650178 (+)3.813e-15
Glyma.09G084300 hypothetical protein AT2G34680:AIR9:Outer arm dynein light chain 1 protein 1Chr09:10129602–10197250 (-)5.719e-14
Glyma.09G249500 hypothetical protein NA 1Chr09:47056885–47062577 (+)8.073e-14
Glyma.09G252000 hypothetical protein AT2G40730:CTEXP:kinase family with ARM repeat domain-containing protein 1Chr09:47233101–47242848 (+)1.08e-11
Glyma.09G252300 hypothetical protein AT5G16520:AT5G16520:uncharacterized protein 1Chr09:47254519–47261787 (-)1.08e-11
Glyma.11G024800 hypothetical protein NA 1Chr11:1754343–1759398 (+)9.71e-11
Glyma.12G203600 EXPB8 AT2G20750:EXPB1:expansin B1 1Chr12:36390283–36394245 (-)1.648e-11
Glyma.13G135500 hypothetical protein AT5G02780:GSTL1:glutathione transferase lambda 1 1Chr13:24798567–24801567 (+)3.793e-11
Glyma.13G135700 hypothetical protein NA 1Chr13:24812720–24818735 (+)3.793e-11
Glyma.13G135800 hypothetical protein AT5G02800:CDL1:Protein kinase superfamily protein 1Chr13:24820151–24823999 (-)3.793e-11
Glyma.13G156000 hypothetical protein AT2G07560:HA6:H[+]-ATPase 6__AT3G42640:HA8:H[+]-ATPase 8 1Chr13:27104338–27109785 (+)2.188e-12
Glyma.14G066800 hypothetical protein NA 1Chr14:5511222–5513114 (+)5.74e-13
Glyma.14G068100 hypothetical protein AT3G12550:FDM3:XH/XS domain-containing protein 1Chr14:5701618–5711043 (-)1.218e-11
Glyma.14G068500 hypothetical protein NA 1Chr14:5741909–5745574 (-)8.332e-13
Glyma.14G069500 hypothetical protein AT5G37810:NIP4;1:NOD26-like intrinsic protein 4;1 1Chr14:5822246–5825628 (-)2.821e-14
Glyma.14G071700 hypothetical protein AT1G19660:AT1G19660:Wound-responsive family protein__AT1G75380:BBD1:bifunctional nuclease in basal defense response 1 1Chr14:6037810–6041899 (+)9.711e-11
Glyma.14G071800 hypothetical protein NA 1Chr14:6040746–6041899 (-)9.711e-11
Glyma.14G075900 hypothetical protein NA 1Chr14:6362111–6364010 (-)5.775e-13
Glyma.14G213400 hypothetical protein NA 1Chr14:47844823–47847028 (+)8.445e-12
Glyma.15G121100 hypothetical protein NA 1Chr15:9567797–9570248 (+)3.913e-14
Glyma.15G121300 hypothetical protein AT5G47760:PGLP2:2-phosphoglycolate phosphatase 2 1Chr15:9584685–9590201 (-)6.838e-14
Glyma.15G121500 hypothetical protein AT1G03370:AT1G03370:C2 calcium/lipid-binding and GRAM domain containing protein 1Chr15:9602794–9615281 (+)3.913e-14
Glyma.15G121800 hypothetical protein NA 1Chr15:9643746–9648073 (+)3.913e-14
Glyma.16G145100 hypothetical protein NA 1Chr16:30578388–30581421 (-)3.63e-12
Glyma.16G145600 hypothetical protein AT1G11310:MLO2:Seven transmembrane MLO family protein__AT2G39200:MLO12:Seven transmembrane MLO family protein__AT1G6156… 1Chr16:30652378–30659548 (+)3.63e-12
Glyma.16G146300 hypothetical protein NA 1Chr16:30714315–30716624 (+)2.289e-11
Glyma.16G147000 hypothetical protein NA 1Chr16:30773803–30777822 (-)8.815e-11
Glyma.17G144400 hypothetical protein NA 1Chr17:11801158–11803913 (+)8.375e-11
Glyma.17G215700 hypothetical protein AT5G11040:TRS120:TRS120 1Chr17:36319785–36329259 (-)4.305e-11
Glyma.18G201700 hypothetical protein NA 1Chr18:48175554–48180264 (+)2.402e-13
Glyma.18G230700 hypothetical protein AT3G61290:AT3G61290:O-glucosyltransferase rumi-like protein (DUF821) 1Chr18:51943730–51947645 (+)3.581e-11
Glyma.18G242900 hypothetical protein NA 1Chr18:53113341–53119592 (-)1.384e-11
Glyma.19G128200 hypothetical protein NA 1Chr19:38739769–38743404 (+)2.277e-11