Soybean mGWAS DBExplore The Genetic Basis Of Soybean Metabolism Glycine max
Overview Annotation GWAS Evidence Associated genes

P18845

Metabolite ID
P18845
Deionized mass
317.2063 Da
Average m/z
318.2135
Average RT
12.8582
Adduct
[M+H]+
Association scope
Overlapping genes only
Associated genes
44
GWAS result file
Available
Open in Soybean Metabolome Repository

Candidate annotations

Search compound candidates by deionized mass and tolerance. Follow compound IDs for database records, or use name searches to explore chemistry and soybean literature. About candidate annotations

GWAS Evidence

Dataset: indexed GWAS records.

Settings

SNP counts, plot highlights, gene associations and downloads use P < 10⁻¹⁰. Changing the threshold updates this page together.

Loading GWAS records…

Loading Manhattan plot…

This Q–Q plot describes the indexed records. For downsampled files, it does not represent the distribution across all tested variants. Data coverage

Loading Q–Q plot…
Loading GWAS summary…

Associated genes

44 genes linked to SNP records with P < 10⁻¹⁰ in the selected scope. Supporting SNP records are counted per feature–gene pair.

Gene ID Alias Description Arabidopsis ortholog Supporting SNP recordsGene interval (1-based)Minimum P
Glyma.01G126800 hypothetical protein NA 2Chr01:43602195–43612710 (+)8.329e-11
Glyma.19G224000 hypothetical protein AT4G11160:AT4G11160:Translation initiation factor 2, small GTP-binding protein 2Chr19:47620374–47625859 (+)8.71e-11
Glyma.01G120000 hypothetical protein NA 1Chr01:41270985–41274854 (+)1.463e-11
Glyma.01G123900 hypothetical protein AT3G51770:ETO1:tetratricopeptide repeat (TPR)-containing protein 1Chr01:42831758–42837350 (+)7.043e-11
Glyma.01G126900 hypothetical protein NA 1Chr01:43632082–43635399 (+)8.329e-11
Glyma.02G088200 hypothetical protein AT1G64680:AT1G64680:beta-carotene isomerase D27 1Chr02:7717452–7725490 (+)8.763e-11
Glyma.02G115600 hypothetical protein AT1G13860:QUL1:QUASIMODO2 LIKE 1__AT2G03480:QUL2:QUASIMODO2 LIKE 2 1Chr02:11259456–11263276 (+)9.951e-11
Glyma.02G115900 hypothetical protein AT1G26480:GRF12:ral regulatory factor 12 1Chr02:11280858–11285984 (+)9.26e-13
Glyma.03G135600 hypothetical protein NA 1Chr03:35109981–35110632 (-)8.124e-12
Glyma.03G136000 hypothetical protein NA 1Chr03:35138670–35188160 (-)1.335e-11
Glyma.03G252800 hypothetical protein AT5G18430:AT5G18430:GDSL-like Lipase/Acylhydrolase superfamily protein 1Chr03:44849419–44851672 (+)9.531e-12
Glyma.05G124700 hypothetical protein NA 1Chr05:31807311–31817648 (+)1.938e-12
Glyma.05G127200 hypothetical protein AT1G29790:AT1G29790:S-adenosyl-L-methionine-dependent methyltransferases superfamily protein 1Chr05:32014213–32017922 (-)7.107e-11
Glyma.05G127300 hypothetical protein AT1G64520:RPN12a:regulatory particle non-ATPase 12A__AT5G42040:RPN12b:regulatory particle non-ATPase 12B 1Chr05:32021521–32025767 (-)1.166e-12
Glyma.05G127400 hypothetical protein AT1G29850:AT1G29850:double-stranded DNA-binding family protein 1Chr05:32030115–32033716 (+)1.166e-12
Glyma.05G127500 hypothetical protein NA 1Chr05:32041345–32049554 (+)4.692e-13
Glyma.05G127800 hypothetical protein AT4G18240:SS4:starch synthase 4 1Chr05:32125404–32138244 (+)2.894e-12
Glyma.05G127900 SAD1 AT5G48870:SAD1:Small nuclear ribonucleoprotein family protein 1Chr05:32139620–32141770 (-)2.894e-12
Glyma.05G128200 hypothetical protein AT5G46330:FLS2:Leucine-rich receptor-like protein kinase family protein 1Chr05:32158034–32162343 (-)2.894e-12
Glyma.05G224500 hypothetical protein NA 1Chr05:40342583–40345336 (+)1.047e-11
Glyma.05G224700 hypothetical protein NA 1Chr05:40351005–40361888 (+)4.398e-15
Glyma.05G226000 hypothetical protein AT5G19730:AT5G19730:Pectin lyase-like superfamily protein 1Chr05:40458098–40461736 (+)5.883e-18
Glyma.05G226400 hypothetical protein AT4G29140:ADS1:MATE efflux family protein 1Chr05:40480968–40482410 (-)4.806e-13
Glyma.05G236700 hypothetical protein AT4G33760:AT4G33760:tRNA synthetase class II (D, K and N) family protein 1Chr05:41301540–41310727 (+)9.917e-12
Glyma.05G237800 hypothetical protein AT1G48790:AMSH1:associated molecule with the SH3 domain of STAM 1 1Chr05:41406807–41413022 (-)3.915e-12
Glyma.06G125200 hypothetical protein AT4G27940:MTM1:manganese tracking factor for mitochondrial SOD2 1Chr06:10209787–10215982 (+)1.697e-12
Glyma.06G125300 hypothetical protein AT5G24105:AGP41:arabinogalactan protein 41 1Chr06:10216506–10218901 (-)1.697e-12
Glyma.06G126500 hypothetical protein AT5G04070:AT5G04070:NAD(P)-binding Rossmann-fold superfamily protein 1Chr06:10367536–10373426 (-)5.957e-12
Glyma.06G126900 hypothetical protein AT5G04520:AT5G04520:3-oxoacyl-acyl-carrier synthase-like protein (Protein of unknown function DUF455) 1Chr06:10403126–10408307 (-)1.29e-11
Glyma.06G130300 hypothetical protein AT5G53080:AT5G53080:Tetratricopeptide repeat (TPR)-like superfamily protein 1Chr06:10709045–10716245 (-)5.14e-11
Glyma.07G015700 hypothetical protein AT1G79750:NADP-ME4:NADP-malic enzyme 4 1Chr07:1244977–1251198 (-)1.284e-11
Glyma.09G080200 hypothetical protein NA 1Chr09:9256042–9263239 (-)6.839e-11
Glyma.09G082000 hypothetical protein NA 1Chr09:9638564–9650178 (+)3.588e-15
Glyma.09G084300 hypothetical protein AT2G34680:AIR9:Outer arm dynein light chain 1 protein 1Chr09:10129602–10197250 (-)7.479e-14
Glyma.12G021200 hypothetical protein NA 1Chr12:1524303–1527258 (+)6.739e-12
Glyma.13G203200 hypothetical protein AT3G52105:AT3G52105:DIS3-exonuclease-like protein 1Chr13:31720004–31725252 (+)4.685e-11
Glyma.13G203300 hypothetical protein AT3G63530:BB:RING/U-box superfamily protein 1Chr13:31727841–31735910 (-)4.684e-11
Glyma.13G203700 hypothetical protein NA 1Chr13:31780982–31784218 (+)4.685e-11
Glyma.16G018000 hypothetical protein NA 1Chr16:1601748–1607341 (-)2.736e-11
Glyma.19G128200 hypothetical protein NA 1Chr19:38739769–38743404 (+)1.651e-12
Glyma.19G144200 hypothetical protein AT2G42280:FBH4:basic helix-loop-helix (bHLH) DNA-binding superfamily protein 1Chr19:40545843–40548762 (+)3.591e-11
Glyma.19G222200 hypothetical protein NA 1Chr19:47439424–47441508 (+)9.105e-11
Glyma.19G223300 hypothetical protein AT4G01610:AT4G01610:Cysteine proteinases superfamily protein__AT1G02305:AT1G02305:Cysteine proteinases superfamily prot… 1Chr19:47559538–47565331 (-)8.71e-11
Glyma.19G224100 hypothetical protein NA 1Chr19:47626692–47629861 (+)8.71e-11