Soybean mGWAS DBExplore The Genetic Basis Of Soybean Metabolism Glycine max
Overview Annotation GWAS Evidence Associated genes

P17651

Metabolite ID
P17651
Deionized mass
234.1235 Da
Average m/z
235.1300
Average RT
12.5875
Adduct
[M+H]+
Association scope
Overlapping genes only
Associated genes
49
GWAS result file
Available
Open in Soybean Metabolome Repository

Candidate annotations

Search compound candidates by deionized mass and tolerance. Follow compound IDs for database records, or use name searches to explore chemistry and soybean literature. About candidate annotations

GWAS Evidence

Dataset: indexed GWAS records.

Settings

SNP counts, plot highlights, gene associations and downloads use P < 10⁻¹⁰. Changing the threshold updates this page together.

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Associated genes

49 genes linked to SNP records with P < 10⁻¹⁰ in the selected scope. Supporting SNP records are counted per feature–gene pair.

Gene ID Alias Description Arabidopsis ortholog Supporting SNP recordsGene interval (1-based)Minimum P
Glyma.08G117400 hypothetical protein AT4G18750:DOT4:Pentatricopeptide repeat (PPR) superfamily protein 2Chr08:9054060–9063297 (+)1.155e-13
Glyma.08G117500 hypothetical protein AT4G18780:IRX1:cellulose synthase family protein 2Chr08:9065033–9071774 (-)1.286e-15
Glyma.08G117700 hypothetical protein NA 2Chr08:9080318–9084658 (-)6.741e-13
Glyma.08G123500 hypothetical protein NA 2Chr08:9494946–9505931 (-)9.984e-12
Glyma.01G045400 hypothetical protein NA 1Chr01:5140834–5144197 (-)2.686e-11
Glyma.01G119600 SLE3 AT2G40170:GEA6:Stress induced protein 1Chr01:41172520–41174209 (-)1.527e-13
Glyma.01G120000 hypothetical protein NA 1Chr01:41270985–41274854 (+)6.904e-16
Glyma.01G121400 hypothetical protein AT5G01400:ESP4:HEAT repeat-containing protein 1Chr01:41808055–41828625 (-)4.154e-14
Glyma.01G123900 hypothetical protein AT3G51770:ETO1:tetratricopeptide repeat (TPR)-containing protein 1Chr01:42831758–42837350 (+)1.86e-12
Glyma.01G124100 hypothetical protein NA 1Chr01:42886229–42892204 (-)5.108e-12
Glyma.01G124800 hypothetical protein AT2G38320:TBL34:TRICHOME BIREFRINGENCE-LIKE 34 1Chr01:43072403–43076304 (+)3.983e-11
Glyma.01G125400 hypothetical protein NA 1Chr01:43394231–43404097 (-)3.983e-11
Glyma.01G125500 hypothetical protein NA 1Chr01:43398981–43401979 (+)3.983e-11
Glyma.01G126000 hypothetical protein AT5G01650:AT5G01650:Tautomerase/MIF superfamily protein 1Chr01:43477322–43480661 (-)3.983e-11
Glyma.01G126300 hypothetical protein NA 1Chr01:43513210–43516682 (-)3.983e-11
Glyma.01G126400 hypothetical protein NA 1Chr01:43526917–43529405 (-)3.983e-11
Glyma.01G126500 hypothetical protein NA 1Chr01:43543307–43549330 (-)3.984e-11
Glyma.04G084200 hypothetical protein AT2G25830:AT2G25830:YebC-like protein 1Chr04:7137351–7146570 (-)6.276e-11
Glyma.05G224500 hypothetical protein NA 1Chr05:40342583–40345336 (+)4.41e-11
Glyma.05G224700 hypothetical protein NA 1Chr05:40351005–40361888 (+)5.282e-12
Glyma.05G226000 hypothetical protein AT5G19730:AT5G19730:Pectin lyase-like superfamily protein 1Chr05:40458098–40461736 (+)6.117e-14
Glyma.05G226400 hypothetical protein AT4G29140:ADS1:MATE efflux family protein 1Chr05:40480968–40482410 (-)3.421e-11
Glyma.05G236400 hypothetical protein AT1G23210:GH9B6:glycosyl hydrolase 9B6__AT1G70710:GH9B1:glycosyl hydrolase 9B1 1Chr05:41274513–41279615 (-)6.717e-12
Glyma.05G236700 hypothetical protein AT4G33760:AT4G33760:tRNA synthetase class II (D, K and N) family protein 1Chr05:41301540–41310727 (+)2.292e-18
Glyma.05G237800 hypothetical protein AT1G48790:AMSH1:associated molecule with the SH3 domain of STAM 1 1Chr05:41406807–41413022 (-)9.889e-15
Glyma.06G200200 hypothetical protein NA 1Chr06:18327920–18331068 (-)6.57e-12
Glyma.08G117100 hypothetical protein AT2G34190:AT2G34190:Xanthine/uracil permease family protein 1Chr08:9032236–9036159 (+)1.341e-12
Glyma.08G118400 hypothetical protein AT4G18810:AT4G18810:NAD(P)-binding Rossmann-fold superfamily protein 1Chr08:9147404–9153858 (-)1.286e-15
Glyma.08G118500 hypothetical protein NA 1Chr08:9161382–9162471 (+)6.41e-12
Glyma.08G118600 hypothetical protein AT1G29300:UNE1:intracellular protein transporter, putative (DUF641) 1Chr08:9169843–9172229 (-)8.221e-11
Glyma.08G119300 hypothetical protein AT1G29330:ERD2:ER lumen protein retaining receptor family protein 1Chr08:9198213–9201688 (-)3.108e-12
Glyma.08G122200 hypothetical protein NA 1Chr08:9416766–9429995 (-)9.984e-12
Glyma.08G122300 hypothetical protein AT1G29390:COR314-TM2:cold regulated 314 thylakoid membrane 2 1Chr08:9435391–9437279 (+)9.984e-12
Glyma.08G122500 hypothetical protein NA 1Chr08:9441329–9445315 (-)9.984e-12
Glyma.08G122700 hypothetical protein AT1G29350:AT1G29350:RNA polymerase II degradation factor-like protein (DUF1296) 1Chr08:9452604–9458932 (+)9.984e-12
Glyma.08G147200 hypothetical protein AT3G18710:PUB29:plant U-box 29__AT5G64660:CMPG2:CYS, MET, PRO, and GLY protein 2 1Chr08:11225587–11227445 (+)6.666e-11
Glyma.08G147300 hypothetical protein NA 1Chr08:11238871–11242682 (+)4.807e-12
Glyma.08G147400 hypothetical protein AT1G48870:AT1G48870:Transducin/WD40 repeat-like superfamily protein 1Chr08:11248804–11251957 (+)1.435e-11
Glyma.08G211800 hypothetical protein NA 1Chr08:17104514–17105442 (-)4.773e-12
Glyma.13G201600 hypothetical protein NA 1Chr13:31521512–31522992 (+)6.161e-11
Glyma.13G203900 hypothetical protein NA 1Chr13:31793697–31796601 (-)3.743e-11
Glyma.14G201800 hypothetical protein AT5G58390:AT5G58390:Peroxidase superfamily protein 1Chr14:46728613–46733836 (+)3.234e-11
Glyma.16G105400 hypothetical protein AT2G43040:NPG1:tetratricopeptide repeat (TPR)-containing protein 1Chr16:21357465–21364357 (-)9.678e-11
Glyma.16G179800 hypothetical protein AT5G52520:OVA6:Class II aaRS and biotin synthetases superfamily protein 1Chr16:34022480–34027055 (-)7.46e-11
Glyma.16G210300 hypothetical protein AT1G73340:AT1G73340:Cytochrome P450 superfamily protein 1Chr16:36943073–36948828 (+)4.068e-11
Glyma.16G210400 hypothetical protein AT1G73350:AT1G73350:ankyrin repeat protein 1Chr16:36949685–36953467 (+)4.068e-11
Glyma.17G215500 KNAT5 NA 1Chr17:36212363–36217688 (-)8.986e-11
Glyma.18G108400 hypothetical protein NA 1Chr18:12370997–12390275 (-)2.746e-12
Glyma.18G298600 hypothetical protein AT1G44960:AT1G44960:SNARE associated Golgi protein family 1Chr18:57614292–57617223 (+)3.262e-11