Overview Annotation GWAS Evidence Associated genes

P17395

Metabolite ID
P17395
Deionized mass
352.0765 Da
Average m/z
353.0850
Average RT
12.5291
Adduct
[M+H]+
Association scope
Overlapping genes only
Associated genes
13
GWAS result file
Available

Candidate annotations

Search compound candidates by deionized mass and tolerance. Follow compound IDs for database records, or use name searches to explore chemistry and soybean literature. About candidate annotations

GWAS Evidence

Dataset: indexed GWAS records.

Settings

SNP counts, plot highlights, gene associations and downloads use P < 10⁻¹⁰. Changing the threshold updates this page together.

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This Q–Q plot describes the indexed records. For downsampled files, it does not represent the distribution across all tested variants. Data coverage

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Associated genes

13 genes linked to SNP records with P < 10⁻¹⁰ in the selected scope. Supporting SNP records are counted per feature–gene pair.

Gene ID Alias Description Arabidopsis ortholog Supporting SNP recordsGene interval (1-based)Minimum P
Glyma.03G120100 hypothetical protein AT5G26120:ASD2:alpha-L-arabinofuranosidase 2 2Chr03:33174618–33180955 (+)5.163e-11
Glyma.19G029600 hypothetical protein NA 2Chr19:3681517–3690884 (-)4.467e-11
Glyma.01G034700 hypothetical protein NA 1Chr01:3599923–3602578 (-)1.102e-12
Glyma.02G287700 hypothetical protein AT3G58780:SHP1:K-box region and MADS-box transcription factor family protein__AT2G42830:SHP2:K-box region and MADS-box … 1Chr02:46797935–46805223 (-)1.501e-11
Glyma.05G149900 hypothetical protein NA 1Chr05:34389242–34393621 (-)2.286e-11
Glyma.05G236700 hypothetical protein AT4G33760:AT4G33760:tRNA synthetase class II (D, K and N) family protein 1Chr05:41301540–41310727 (+)1.59e-11
Glyma.10G078700 hypothetical protein NA 1Chr10:8882318–8903950 (+)6.666e-11
Glyma.10G079100 hypothetical protein NA 1Chr10:8960669–8962364 (-)6.666e-11
Glyma.10G079800 hypothetical protein NA 1Chr10:9223520–9228511 (-)6.666e-11
Glyma.10G080000 hypothetical protein AT3G11660:NHL1:NDR1/HIN1-like 1__AT3G52470:AT3G52470:Late embryosis abundant (LEA) hydroxyproline-rich glycoprotein fam… 1Chr10:9258476–9260697 (-)6.666e-11
Glyma.11G064300 hypothetical protein AT4G36780:BEH2:BES1/BZR1 homolog 2 1Chr11:4849799–4851673 (+)6.677e-11
Glyma.13G095000 hypothetical protein NA 1Chr13:21005327–21006774 (-)5.033e-13
Glyma.16G113000 hypothetical protein NA 1Chr16:25112070–25116073 (+)7.263e-11