Overview Annotation GWAS Evidence Associated genes

P17393

Metabolite ID
P17393
Deionized mass
203.0567 Da
Average m/z
204.0647
Average RT
12.5287
Adduct
[M+H]+
Association scope
Overlapping genes only
Associated genes
17
GWAS result file
Available

Candidate annotations

Search compound candidates by deionized mass and tolerance. Follow compound IDs for database records, or use name searches to explore chemistry and soybean literature. About candidate annotations

GWAS Evidence

Dataset: indexed GWAS records.

Settings

SNP counts, plot highlights, gene associations and downloads use P < 10⁻¹⁰. Changing the threshold updates this page together.

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This Q–Q plot describes the indexed records. For downsampled files, it does not represent the distribution across all tested variants. Data coverage

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Associated genes

17 genes linked to SNP records with P < 10⁻¹⁰ in the selected scope. Supporting SNP records are counted per feature–gene pair.

Gene ID Alias Description Arabidopsis ortholog Supporting SNP recordsGene interval (1-based)Minimum P
Glyma.16G111500 hypothetical protein AT4G35500:AT4G35500:Protein kinase superfamily protein 2Chr16:24626024–24635513 (+)2.632e-11
Glyma.03G242800 hypothetical protein AT4G08630:AT4G08630:fas-binding factor-like protein 1Chr03:44064511–44073939 (+)8.267e-11
Glyma.05G236400 hypothetical protein AT1G23210:GH9B6:glycosyl hydrolase 9B6__AT1G70710:GH9B1:glycosyl hydrolase 9B1 1Chr05:41274513–41279615 (-)3.444e-12
Glyma.06G313500 hypothetical protein NA 1Chr06:50191600–50203098 (-)3.07e-11
Glyma.12G049300 hypothetical protein NA 1Chr12:3538428–3539170 (-)2.922e-11
Glyma.14G069500 hypothetical protein AT5G37810:NIP4;1:NOD26-like intrinsic protein 4;1 1Chr14:5822246–5825628 (-)1.886e-12
Glyma.14G201600 hypothetical protein NA 1Chr14:46703283–46706500 (+)9.124e-11
Glyma.14G201700 hypothetical protein NA 1Chr14:46711634–46715644 (-)9.124e-11
Glyma.15G121100 hypothetical protein NA 1Chr15:9567797–9570248 (+)5.574e-13
Glyma.15G121300 hypothetical protein AT5G47760:PGLP2:2-phosphoglycolate phosphatase 2 1Chr15:9584685–9590201 (-)1.708e-12
Glyma.15G121500 hypothetical protein AT1G03370:AT1G03370:C2 calcium/lipid-binding and GRAM domain containing protein 1Chr15:9602794–9615281 (+)5.574e-13
Glyma.15G121800 hypothetical protein NA 1Chr15:9643746–9648073 (+)5.574e-13
Glyma.15G172900 hypothetical protein AT5G57070:AT5G57070:hydroxyproline-rich glycoprotein family protein 1Chr15:15847563–15849835 (+)2.452e-11
Glyma.16G106300 hypothetical protein AT5G23900:AT5G23900:Ribosomal protein L13e family protein 1Chr16:21495147–21497932 (+)1.805e-11
Glyma.16G111100 hypothetical protein NA 1Chr16:24438458–24444801 (+)2.633e-11
Glyma.16G144700 hypothetical protein AT5G66960:AT5G66960:Prolyl oligopeptidase family protein 1Chr16:30514629–30519598 (+)8.802e-11
Glyma.18G230700 hypothetical protein AT3G61290:AT3G61290:O-glucosyltransferase rumi-like protein (DUF821) 1Chr18:51943730–51947645 (+)3.049e-11