Overview Annotation GWAS Evidence Associated genes

P17252

Metabolite ID
P17252
Deionized mass
365.1502 Da
Average m/z
366.1570
Average RT
12.4900
Adduct
[M+H]+
Association scope
Overlapping genes only
Associated genes
149
GWAS result file
Available

Candidate annotations

Search compound candidates by deionized mass and tolerance. Follow compound IDs for database records, or use name searches to explore chemistry and soybean literature. About candidate annotations

GWAS Evidence

Dataset: indexed GWAS records.

Settings

SNP counts, plot highlights, gene associations and downloads use P < 10⁻¹⁰. Changing the threshold updates this page together.

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This Q–Q plot describes the indexed records. For downsampled files, it does not represent the distribution across all tested variants. Data coverage

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Associated genes

149 genes linked to SNP records with P < 10⁻¹⁰ in the selected scope. Supporting SNP records are counted per feature–gene pair.

Gene ID Alias Description Arabidopsis ortholog Supporting SNP recordsGene interval (1-based)Minimum P
Glyma.19G027000 hypothetical protein NA 4Chr19:3335896–3343744 (+)4.036e-14
Glyma.01G045600 hypothetical protein NA 3Chr01:5242432–5245038 (-)3.399e-12
Glyma.08G123500 hypothetical protein NA 3Chr08:9494946–9505931 (-)1.609e-17
Glyma.16G209300 hypothetical protein NA 3Chr16:36856833–36863994 (-)9.01e-12
Glyma.16G210200 hypothetical protein NA 3Chr16:36933402–36938940 (+)8.336e-11
Glyma.17G218600 hypothetical protein NA 3Chr17:36975400–36982812 (-)1.272e-11
Glyma.02G006500 hypothetical protein AT4G01660:ABC1:ABC transporter 1 2Chr02:693193–700260 (+)1.88e-11
Glyma.03G021400 hypothetical protein AT2G45540:AT2G45540:WD-40 repeat family protein / beige-like protein 2Chr03:2202325–2234931 (+)6.921e-11
Glyma.06G313500 hypothetical protein NA 2Chr06:50191600–50203098 (-)5.676e-14
Glyma.08G117500 hypothetical protein AT4G18780:IRX1:cellulose synthase family protein 2Chr08:9065033–9071774 (-)8.938e-12
Glyma.08G117700 hypothetical protein NA 2Chr08:9080318–9084658 (-)1.637e-12
Glyma.08G122200 hypothetical protein NA 2Chr08:9416766–9429995 (-)1.609e-17
Glyma.08G122300 hypothetical protein AT1G29390:COR314-TM2:cold regulated 314 thylakoid membrane 2 2Chr08:9435391–9437279 (+)1.609e-17
Glyma.09G274700 hypothetical protein NA 2Chr09:49057465–49065986 (-)3.204e-17
Glyma.09G275800 hypothetical protein NA 2Chr09:49116424–49122191 (-)3.204e-17
Glyma.09G276100 hypothetical protein AT2G38510:AT2G38510:MATE efflux family protein 2Chr09:49139110–49143810 (-)3.204e-17
Glyma.09G277300 hypothetical protein NA 2Chr09:49271634–49276648 (-)2.204e-13
Glyma.13G134400 hypothetical protein AT2G37370:AT2G37370:centrosomal protein of 135 kDa-like protein 2Chr13:24677399–24693129 (-)8.229e-11
Glyma.14G093100 hypothetical protein NA 2Chr14:8654730–8655892 (-)5.078e-14
Glyma.16G031600 hypothetical protein NA 2Chr16:2964569–2985013 (+)1.604e-11
Glyma.17G216700 hypothetical protein AT4G31930:AT4G31930:Mitochondrial glycoprotein family protein 2Chr17:36510062–36519347 (+)9.893e-12
Glyma.19G026600 hypothetical protein AT4G13700:PAP23:purple acid phosphatase 23 2Chr19:3303658–3312907 (-)4.036e-14
Glyma.19G029600 hypothetical protein NA 2Chr19:3681517–3690884 (-)9.108e-15
Glyma.19G029800 hypothetical protein NA 2Chr19:3724518–3729860 (-)6.849e-13
Glyma.20G107200 hypothetical protein AT4G38540:AT4G38540:FAD/NAD(P)-binding oxidoreductase family protein 2Chr20:34984922–34988496 (+)1.419e-11
Glyma.01G045400 hypothetical protein NA 1Chr01:5140834–5144197 (-)7.305e-11
Glyma.01G045700 hypothetical protein AT1G69680:AT1G69680:ran guanine nucleotide release factor, putative (Mog1/PsbP/DUF1795-like photosystem II reaction cen… 1Chr01:5265956–5271379 (-)3.399e-12
Glyma.01G168800 hypothetical protein AT1G24430:AT1G24430:HXXXD-type acyl-transferase family protein 1Chr01:50633986–50636589 (+)5.438e-12
Glyma.01G169700 hypothetical protein AT4G36410:UBC17:ubiquitin-conjugating enzyme 17 1Chr01:50715084–50719427 (-)8.334e-11
Glyma.01G169800 hypothetical protein AT4G36400:D2HGDH:FAD-linked oxidases family protein 1Chr01:50726088–50733347 (-)8.334e-11
Glyma.01G173900 hypothetical protein NA 1Chr01:51092004–51094319 (+)1.098e-13
Glyma.01G176400 hypothetical protein AT1G63810:AT1G63810:nucleolar protein 1Chr01:51285599–51295173 (-)2.927e-11
Glyma.02G086900 hypothetical protein AT3G24130:AT3G24130:Pectin lyase-like superfamily protein 1Chr02:7553127–7557516 (-)2.544e-12
Glyma.02G133800 hypothetical protein AT1G49660:CXE5:carboxyesterase 5 1Chr02:13850366–13851962 (-)4.297e-13
Glyma.03G023000 hypothetical protein AT4G00220:JLO:Lateral organ boundaries (LOB) domain family protein 1Chr03:2423540–2428634 (-)1.648e-13
Glyma.03G209700 hypothetical protein NA 1Chr03:41646792–41648527 (+)3.387e-12
Glyma.04G084200 hypothetical protein AT2G25830:AT2G25830:YebC-like protein 1Chr04:7137351–7146570 (-)2.058e-14
Glyma.04G086600 hypothetical protein NA 1Chr04:7374806–7380808 (+)9.076e-11
Glyma.04G237000 hypothetical protein AT1G31910:AT1G31910:GHMP kinase family protein 1Chr04:50558708–50569783 (+)6.915e-12
Glyma.04G237200 hypothetical protein AT3G52210:AT3G52210:S-adenosyl-L-methionine-dependent methyltransferases superfamily protein 1Chr04:50576216–50582296 (-)6.915e-12
Glyma.04G237500 hypothetical protein AT5G15940:AT5G15940:NAD(P)-binding Rossmann-fold superfamily protein__AT5G04070:AT5G04070:NAD(P)-binding Rossmann-fold … 1Chr04:50604264–50609423 (+)6.914e-12
Glyma.05G224500 hypothetical protein NA 1Chr05:40342583–40345336 (+)3.523e-11
Glyma.05G224700 hypothetical protein NA 1Chr05:40351005–40361888 (+)5.919e-14
Glyma.05G226000 hypothetical protein AT5G19730:AT5G19730:Pectin lyase-like superfamily protein 1Chr05:40458098–40461736 (+)1.432e-13
Glyma.05G226400 hypothetical protein AT4G29140:ADS1:MATE efflux family protein 1Chr05:40480968–40482410 (-)8.655e-11
Glyma.05G236400 hypothetical protein AT1G23210:GH9B6:glycosyl hydrolase 9B6__AT1G70710:GH9B1:glycosyl hydrolase 9B1 1Chr05:41274513–41279615 (-)1.126e-12
Glyma.05G236700 hypothetical protein AT4G33760:AT4G33760:tRNA synthetase class II (D, K and N) family protein 1Chr05:41301540–41310727 (+)1.139e-14
Glyma.05G237800 hypothetical protein AT1G48790:AMSH1:associated molecule with the SH3 domain of STAM 1 1Chr05:41406807–41413022 (-)7.48e-12
Glyma.06G130900 hypothetical protein AT4G27800:TAP38:thylakoid-associated phosphatase 38 1Chr06:10753446–10757827 (+)1.268e-11
Glyma.06G261900 hypothetical protein NA 1Chr06:44875369–44879702 (-)3.841e-13
Glyma.06G315100 hypothetical protein AT5G04930:ALA1:aminophospholipid ATPase 1 1Chr06:50401945–50408153 (+)3.908e-12
Glyma.07G015700 hypothetical protein AT1G79750:NADP-ME4:NADP-malic enzyme 4 1Chr07:1244977–1251198 (-)6.24e-11
Glyma.08G016700 hypothetical protein AT1G63840:AT1G63840:RING/U-box superfamily protein 1Chr08:1330226–1331366 (-)8.042e-11
Glyma.08G118400 hypothetical protein AT4G18810:AT4G18810:NAD(P)-binding Rossmann-fold superfamily protein 1Chr08:9147404–9153858 (-)8.937e-12
Glyma.08G119300 hypothetical protein AT1G29330:ERD2:ER lumen protein retaining receptor family protein 1Chr08:9198213–9201688 (-)1.112e-11
Glyma.08G122000 hypothetical protein AT5G46400:PRP39-2:Tetratricopeptide repeat (TPR)-like superfamily protein 1Chr08:9397717–9410004 (+)3.242e-11
Glyma.08G122500 hypothetical protein NA 1Chr08:9441329–9445315 (-)1.609e-17
Glyma.08G122600 hypothetical protein NA 1Chr08:9445153–9450502 (+)1.412e-11
Glyma.08G122700 hypothetical protein AT1G29350:AT1G29350:RNA polymerase II degradation factor-like protein (DUF1296) 1Chr08:9452604–9458932 (+)1.609e-17
Glyma.08G182400 hypothetical protein NA 1Chr08:14625596–14626713 (+)5.415e-11
Glyma.08G204800 hypothetical protein AT3G16140:PSAH-1:photosystem I subunit H-1 1Chr08:16601039–16602646 (+)5.024e-12
Glyma.08G211800 hypothetical protein NA 1Chr08:17104514–17105442 (-)9.612e-12
Glyma.09G016500 hypothetical protein NA 1Chr09:1274652–1276853 (-)7.615e-14
Glyma.09G238200 NIP2-1 putative Si transporter NIP2-1 NA 1Chr09:46029192–46034136 (+)1.43e-11
Glyma.09G251800 hypothetical protein AT1G65380:CLV2:Leucine-rich repeat (LRR) family protein 1Chr09:47220796–47224266 (+)3.075e-11
Glyma.09G252100 hypothetical protein AT1G79790:FHY1:Haloacid dehalogenase-like hydrolase (HAD) superfamily protein 1Chr09:47245185–47248478 (+)1.441e-11
Glyma.09G253800 hypothetical protein NA 1Chr09:47356240–47357763 (-)1.277e-12
Glyma.09G253900 hypothetical protein NA 1Chr09:47359742–47364806 (-)1.277e-12
Glyma.09G255700 hypothetical protein AT1G01540:AT1G01540:Protein kinase superfamily protein__AT4G01330:AT4G01330:Protein kinase superfamily protein 1Chr09:47507850–47511743 (+)1.063e-11
Glyma.09G268900 hypothetical protein NA 1Chr09:48638803–48644136 (+)1.881e-13
Glyma.09G269100 hypothetical protein NA 1Chr09:48651429–48653656 (-)1.103e-11
Glyma.09G270200 hypothetical protein AT5G01020:AT5G01020:Protein kinase superfamily protein 1Chr09:48725417–48728520 (-)1.523e-11
Glyma.09G270400 hypothetical protein NA 1Chr09:48735991–48740879 (+)2.74e-13
Glyma.09G270500 hypothetical protein AT1G09780:iPGAM1:Phosphoglycerate mutase, 2,3-bisphosphoglycerate-independent 1Chr09:48745649–48751140 (+)4.908e-13
Glyma.09G274900 hypothetical protein AT5G02280:AT5G02280:SNARE-like superfamily protein 1Chr09:49069946–49073277 (-)3.204e-17
Glyma.09G275100 hypothetical protein AT3G08760:ATSIK:Protein kinase superfamily protein 1Chr09:49079101–49084269 (-)3.204e-17
Glyma.09G275300 hypothetical protein NA 1Chr09:49094668–49096996 (-)3.204e-17
Glyma.09G275500 hypothetical protein NA 1Chr09:49105837–49106989 (+)2.705e-13
Glyma.09G275900 hypothetical protein AT5G01850:AT5G01850:Protein kinase superfamily protein 1Chr09:49128687–49133154 (-)3.204e-17
Glyma.09G276000 hypothetical protein NA 1Chr09:49131662–49132187 (+)3.204e-17
Glyma.09G276300 WNK10 AT3G51630:WNK5:with no lysine (K) kinase 5 1Chr09:49161113–49166087 (+)4.206e-17
Glyma.09G280300 hypothetical protein AT2G38480:AT2G38480:Uncharacterized protein family (UPF0497) 1Chr09:49547489–49550731 (-)5.341e-11
Glyma.09G282900 hypothetical protein AT2G29090:CYP707A2:cytochrome P450, family 707, subfamily A, polypeptide 2 1Chr09:49863377–49871270 (+)5.921e-12
Glyma.10G028500 hypothetical protein NA 1Chr10:2476846–2478953 (+)2.311e-11
Glyma.10G028700 hypothetical protein AT1G03090:MCCA:methylcrotonyl-CoA carboxylase alpha chain 1Chr10:2485817–2497071 (-)2.311e-11
Glyma.10G037300 hypothetical protein AT3G54670:TTN8:Structural maintenance of chromosomes (SMC) family protein 1Chr10:3270545–3283318 (-)1.217e-11
Glyma.10G078700 hypothetical protein NA 1Chr10:8882318–8903950 (+)1.503e-12
Glyma.10G079100 hypothetical protein NA 1Chr10:8960669–8962364 (-)1.503e-12
Glyma.10G079800 hypothetical protein NA 1Chr10:9223520–9228511 (-)1.503e-12
Glyma.10G080000 hypothetical protein AT3G11660:NHL1:NDR1/HIN1-like 1__AT3G52470:AT3G52470:Late embryosis abundant (LEA) hydroxyproline-rich glycoprotein fam… 1Chr10:9258476–9260697 (-)1.503e-12
Glyma.10G081200 hypothetical protein NA 1Chr10:9600771–9603988 (-)7.891e-13
Glyma.10G081700 hypothetical protein NA 1Chr10:9752508–9758422 (+)6.83e-15
Glyma.11G024800 hypothetical protein NA 1Chr11:1754343–1759398 (+)1.96e-11
Glyma.11G048300 hypothetical protein AT4G37640:ACA2:calcium ATPase 2 1Chr11:3601241–3607177 (+)1.434e-12
Glyma.11G049700 hypothetical protein NA 1Chr11:3731308–3734534 (+)1.35e-13
Glyma.11G050300 hypothetical protein AT2G23093:AT2G23093:Major facilitator superfamily protein 1Chr11:3765453–3771565 (+)3.723e-13
Glyma.11G050500 hypothetical protein AT5G67370:CGLD27:DUF1230 family protein (DUF1230) 1Chr11:3778152–3782174 (+)3.723e-13
Glyma.11G050600 hypothetical protein NA 1Chr11:3779988–3786583 (-)3.723e-13
Glyma.11G051600 hypothetical protein NA 1Chr11:3857225–3859564 (-)3.722e-13
Glyma.11G127100 hypothetical protein AT1G06040:STO:B-box zinc finger family protein 1Chr11:9656242–9659517 (+)3.733e-13
Glyma.11G127200 hypothetical protein AT3G59480:AT3G59480:pfkB-like carbohydrate kinase family protein 1Chr11:9660434–9665570 (-)3.733e-13
Glyma.11G127300 hypothetical protein AT2G28480:AT2G28480:RNA-binding CRS1 / YhbY (CRM) domain protein 1Chr11:9667918–9671917 (-)3.733e-13
Glyma.12G054700 hypothetical protein AT3G45140:LOX2:lipoxygenase 2 1Chr12:3949453–3957386 (-)8.23e-11
Glyma.13G134300 hypothetical protein NA 1Chr13:24664171–24665742 (-)8.229e-11
Glyma.13G135500 hypothetical protein AT5G02780:GSTL1:glutathione transferase lambda 1 1Chr13:24798567–24801567 (+)2.486e-12
Glyma.13G135700 hypothetical protein NA 1Chr13:24812720–24818735 (+)2.486e-12
Glyma.13G135800 hypothetical protein AT5G02800:CDL1:Protein kinase superfamily protein 1Chr13:24820151–24823999 (-)2.486e-12
Glyma.13G156000 hypothetical protein AT2G07560:HA6:H[+]-ATPase 6__AT3G42640:HA8:H[+]-ATPase 8 1Chr13:27104338–27109785 (+)5.396e-11
Glyma.13G201600 hypothetical protein NA 1Chr13:31521512–31522992 (+)1.553e-11
Glyma.14G201600 hypothetical protein NA 1Chr14:46703283–46706500 (+)3.015e-11
Glyma.14G201700 hypothetical protein NA 1Chr14:46711634–46715644 (-)3.015e-11
Glyma.14G204400 hypothetical protein AT2G30470:HSI2:B3 domain-containing transcription repressor VAL1 1Chr14:46936057–46943868 (-)1.138e-11
Glyma.15G035600 hypothetical protein AT3G46740:TOC75-III:translocon at the outer envelope membrane of chloroplasts 75-III 1Chr15:2830678–2835534 (+)9.907e-11
Glyma.15G124000 hypothetical protein NA 1Chr15:9845097–9849312 (-)1.141e-12
Glyma.15G124500 MLO-like protein 13 AT4G24250:MLO13:Seven transmembrane MLO family protein 1Chr15:9888761–9894068 (-)3.024e-13
Glyma.16G105100 hypothetical protein NA 1Chr16:21259552–21267517 (-)6.976e-11
Glyma.16G105400 hypothetical protein AT2G43040:NPG1:tetratricopeptide repeat (TPR)-containing protein 1Chr16:21357465–21364357 (-)8.066e-12
Glyma.16G113000 hypothetical protein NA 1Chr16:25112070–25116073 (+)5.173e-12
Glyma.16G115800 hypothetical protein NA 1Chr16:25719040–25728740 (-)8.326e-12
Glyma.16G116200 hypothetical protein AT4G35560:DAW1:Transducin/WD40 repeat-like superfamily protein 1Chr16:25892277–25904773 (+)8.608e-11
Glyma.16G118100 hypothetical protein AT2G17570:cPT1:Undecaprenyl pyrophosphate synthetase family protein 1Chr16:26324650–26336836 (+)8.069e-13
Glyma.16G119300 hypothetical protein NA 1Chr16:26643902–26644416 (+)1.119e-12
Glyma.16G121400 hypothetical protein NA 1Chr16:26989007–26992349 (+)6.775e-11
Glyma.16G121500 hypothetical protein NA 1Chr16:27007186–27010856 (+)1.672e-11
Glyma.16G138900 hypothetical protein NA 1Chr16:29620531–29621995 (+)9.336e-12
Glyma.16G189100 hypothetical protein AT1G05190:emb2394:Ribosomal protein L6 family 1Chr16:35170253–35173950 (-)7.878e-12
Glyma.16G196200 HSF-32 heat stress transcription factor 32 AT5G62020:HSFB2A:heat shock transcription factor B2A 1Chr16:35760178–35761852 (+)3.993e-12
Glyma.16G208500 EIF6 AT3G55620:eIF6A:Translation initiation factor IF6 1Chr16:36806718–36809299 (+)2.757e-11
Glyma.16G209900 hypothetical protein NA 1Chr16:36919141–36924601 (+)8.336e-11
Glyma.16G210300 hypothetical protein AT1G73340:AT1G73340:Cytochrome P450 superfamily protein 1Chr16:36943073–36948828 (+)3.93e-12
Glyma.16G210400 hypothetical protein AT1G73350:AT1G73350:ankyrin repeat protein 1Chr16:36949685–36953467 (+)3.93e-12
Glyma.17G064000 hypothetical protein AT2G18840:AT2G18840:Integral membrane Yip1 family protein__AT4G30260:AT4G30260:Integral membrane Yip1 family protein 1Chr17:4924830–4930155 (-)6.019e-11
Glyma.17G064200 hypothetical protein AT5G57500:AT5G57500:Galactosyltransferase family protein 1Chr17:4943412–4944357 (-)6.019e-11
Glyma.17G215500 KNAT5 NA 1Chr17:36212363–36217688 (-)1.601e-13
Glyma.17G218700 hypothetical protein NA 1Chr17:36986191–36991558 (-)1.272e-11
Glyma.17G251200 hypothetical protein NA 1Chr17:40605249–40607536 (+)1.563e-11
Glyma.18G263900 hypothetical protein AT5G15410:DND1:Cyclic nucleotide-regulated ion channel family protein 1Chr18:54907058–54912936 (-)1.238e-11
Glyma.18G266100 hypothetical protein NA 1Chr18:55052591–55056489 (-)1.528e-11
Glyma.18G267500 hypothetical protein NA 1Chr18:55179516–55181798 (-)8.576e-12
Glyma.19G011700 hypothetical protein AT3G01420:DOX1:Peroxidase superfamily protein 1Chr19:1123637–1130946 (+)9.897e-11
Glyma.19G012100 hypothetical protein AT3G28150:TBL22:TRICHOME BIREFRINGENCE-LIKE 22 1Chr19:1155711–1161298 (-)2.071e-15
Glyma.19G012300 hypothetical protein NA 1Chr19:1165111–1173031 (-)2.071e-15
Glyma.19G119100 hypothetical protein AT3G03650:EDA5:Exostosin family protein 1Chr19:37668759–37672434 (+)1.901e-13
Glyma.19G119200 hypothetical protein AT3G03630:CS26:cysteine synthase 26 1Chr19:37677773–37683394 (+)1.682e-12
Glyma.19G128200 hypothetical protein NA 1Chr19:38739769–38743404 (+)7.682e-11
Glyma.19G218100 hypothetical protein AT1G02390:GPAT2:glycerol-3-phosphate acyltransferase 2 1Chr19:47082133–47085750 (+)8.398e-11
Glyma.20G098400 hypothetical protein AT1G56340:CRT1a:calreticulin 1a__AT1G09210:CRT1b:calreticulin 1b 1Chr20:34151918–34155417 (+)1.045e-13
Glyma.20G099200 hypothetical protein AT3G55410:AT3G55410:2-oxoglutarate dehydrogenase, E1 component__AT5G65750:AT5G65750:2-oxoglutarate dehydrogenase, E1 co… 1Chr20:34242852–34248956 (-)5.581e-11
Glyma.20G109800 hypothetical protein AT2G35130:AT2G35130:Tetratricopeptide repeat (TPR)-like superfamily protein 1Chr20:35213258–35219502 (+)6.088e-11