Overview Annotation GWAS Evidence Associated genes

P17176

Metabolite ID
P17176
Deionized mass
721.2178 Da
Average m/z
722.2280
Average RT
12.4700
Adduct
[M+H]+
Association scope
Overlapping genes only
Associated genes
37
GWAS result file
Available

Candidate annotations

Search compound candidates by deionized mass and tolerance. Follow compound IDs for database records, or use name searches to explore chemistry and soybean literature. About candidate annotations

GWAS Evidence

Dataset: indexed GWAS records.

Settings

SNP counts, plot highlights, gene associations and downloads use P < 10⁻¹⁰. Changing the threshold updates this page together.

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This Q–Q plot describes the indexed records. For downsampled files, it does not represent the distribution across all tested variants. Data coverage

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Associated genes

37 genes linked to SNP records with P < 10⁻¹⁰ in the selected scope. Supporting SNP records are counted per feature–gene pair.

Gene ID Alias Description Arabidopsis ortholog Supporting SNP recordsGene interval (1-based)Minimum P
Glyma.16G111500 hypothetical protein AT4G35500:AT4G35500:Protein kinase superfamily protein 4Chr16:24626024–24635513 (+)2.04e-12
Glyma.07G021800 hypothetical protein AT1G80920:J8:Chaperone DnaJ-domain superfamily protein 2Chr07:1697119–1698666 (+)3.801e-12
Glyma.12G204400 hypothetical protein AT4G03560:TPC1:two-pore channel 1 2Chr12:36473422–36498915 (+)9.841e-12
Glyma.14G201600 hypothetical protein NA 2Chr14:46703283–46706500 (+)8.009e-12
Glyma.03G019600 hypothetical protein AT2G45640:SAP18:SIN3 associated polypeptide P18 1Chr03:2007617–2009871 (+)2.33e-13
Glyma.03G023000 hypothetical protein AT4G00220:JLO:Lateral organ boundaries (LOB) domain family protein 1Chr03:2423540–2428634 (-)5.081e-12
Glyma.05G231800 ALDH2C1 aldehyde dehydrogenase family 2 member C1 AT3G24503:ALDH2C4:aldehyde dehydrogenase 2C4 1Chr05:40924505–40929251 (+)7.071e-17
Glyma.05G236400 hypothetical protein AT1G23210:GH9B6:glycosyl hydrolase 9B6__AT1G70710:GH9B1:glycosyl hydrolase 9B1 1Chr05:41274513–41279615 (-)1.813e-12
Glyma.06G125200 hypothetical protein AT4G27940:MTM1:manganese tracking factor for mitochondrial SOD2 1Chr06:10209787–10215982 (+)8.482e-13
Glyma.06G125300 hypothetical protein AT5G24105:AGP41:arabinogalactan protein 41 1Chr06:10216506–10218901 (-)8.482e-13
Glyma.07G018100 hypothetical protein NA 1Chr07:1442368–1445430 (-)1.516e-11
Glyma.07G018300 hypothetical protein AT3G27750:EMB3123:PPR containing protein 1Chr07:1457706–1458428 (+)1.516e-11
Glyma.07G021700 hypothetical protein NA 1Chr07:1684537–1692320 (+)1.806e-11
Glyma.09G003800 hypothetical protein NA 1Chr09:312735–314744 (-)5.486e-11
Glyma.09G060300 hypothetical protein AT5G57140:PAP28:purple acid phosphatase 28 1Chr09:5609003–5612943 (+)2.185e-12
Glyma.10G079700 hypothetical protein AT2G35980:YLS9:Late embryosis abundant (LEA) hydroxyproline-rich glycoprotein family 1Chr10:9218478–9219468 (-)5.387e-11
Glyma.10G079800 hypothetical protein NA 1Chr10:9223520–9228511 (-)4.853e-11
Glyma.10G079900 hypothetical protein AT3G11650:NHL2:NDR1/HIN1-like 2 1Chr10:9245085–9246282 (-)4.853e-11
Glyma.10G080100 hypothetical protein AT2G44860:AT2G44860:Ribosomal protein L24e family protein 1Chr10:9295934–9296863 (-)4.853e-11
Glyma.10G080200 hypothetical protein NA 1Chr10:9350912–9352018 (+)4.853e-11
Glyma.10G080600 hypothetical protein NA 1Chr10:9501678–9504456 (+)5.128e-11
Glyma.10G080700 hypothetical protein NA 1Chr10:9510013–9512097 (+)5.128e-11
Glyma.10G080900 hypothetical protein NA 1Chr10:9552268–9552854 (+)5.128e-11
Glyma.10G081200 hypothetical protein NA 1Chr10:9600771–9603988 (-)4.853e-11
Glyma.12G202200 hypothetical protein AT2G20860:LIP1:lipoic acid synthase 1 1Chr12:36267599–36271584 (+)7.038e-12
Glyma.12G202300 hypothetical protein NA 1Chr12:36275438–36276838 (+)7.038e-12
Glyma.12G203600 EXPB8 AT2G20750:EXPB1:expansin B1 1Chr12:36390283–36394245 (-)3.128e-13
Glyma.12G203700 hypothetical protein AT4G28260:AT4G28260:acyl-UDP-N-acetylglucosamine O-acyltransferase 1Chr12:36406747–36413696 (+)2.694e-12
Glyma.12G204000 hypothetical protein AT1G03687:AT1G03687:DTW domain-containing protein 1Chr12:36428558–36432835 (+)9.841e-12
Glyma.12G205900 hypothetical protein NA 1Chr12:36622011–36625824 (+)9.303e-11
Glyma.13G293800 hypothetical protein NA 1Chr13:39343173–39346777 (+)7.2e-11
Glyma.14G201700 hypothetical protein NA 1Chr14:46711634–46715644 (-)8.009e-12
Glyma.16G111100 hypothetical protein NA 1Chr16:24438458–24444801 (+)2.04e-12
Glyma.16G111400 hypothetical protein AT4G35510:AT4G35510:PHD finger-like protein 1Chr16:24546422–24549336 (+)7.588e-11
Glyma.17G064000 hypothetical protein AT2G18840:AT2G18840:Integral membrane Yip1 family protein__AT4G30260:AT4G30260:Integral membrane Yip1 family protein 1Chr17:4924830–4930155 (-)3.578e-11
Glyma.17G064200 hypothetical protein AT5G57500:AT5G57500:Galactosyltransferase family protein 1Chr17:4943412–4944357 (-)3.578e-11
Glyma.18G251900 hypothetical protein AT3G60320:AT3G60320:bZIP domain class transcription factor (DUF630 and DUF632)__AT1G02110:AT1G02110:bZIP domain class t… 1Chr18:53855786–53862322 (-)7.846e-12