Soybean mGWAS DBExplore The Genetic Basis Of Soybean Metabolism Glycine max
Overview Annotation GWAS Evidence Associated genes

P17065

Metabolite ID
P17065
Deionized mass
593.1706 Da
Average m/z
594.1787
Average RT
12.4440
Adduct
[M+H]+
Association scope
Overlapping genes only
Associated genes
52
GWAS result file
Available
Open in Soybean Metabolome Repository

Candidate annotations

Search compound candidates by deionized mass and tolerance. Follow compound IDs for database records, or use name searches to explore chemistry and soybean literature. About candidate annotations

GWAS Evidence

Dataset: indexed GWAS records.

Settings

SNP counts, plot highlights, gene associations and downloads use P < 10⁻¹⁰. Changing the threshold updates this page together.

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Associated genes

52 genes linked to SNP records with P < 10⁻¹⁰ in the selected scope. Supporting SNP records are counted per feature–gene pair.

Gene ID Alias Description Arabidopsis ortholog Supporting SNP recordsGene interval (1-based)Minimum P
Glyma.19G027000 hypothetical protein NA 4Chr19:3335896–3343744 (+)3.064e-12
Glyma.15G192700 hypothetical protein AT2G34680:AIR9:Outer arm dynein light chain 1 protein 3Chr15:21029024–21058079 (-)5.271e-12
Glyma.12G203700 hypothetical protein AT4G28260:AT4G28260:acyl-UDP-N-acetylglucosamine O-acyltransferase 2Chr12:36406747–36413696 (+)3.873e-12
Glyma.14G201600 hypothetical protein NA 2Chr14:46703283–46706500 (+)1.199e-13
Glyma.16G118100 hypothetical protein AT2G17570:cPT1:Undecaprenyl pyrophosphate synthetase family protein 2Chr16:26324650–26336836 (+)2.434e-11
Glyma.19G026600 hypothetical protein AT4G13700:PAP23:purple acid phosphatase 23 2Chr19:3303658–3312907 (-)3.064e-12
Glyma.19G029600 hypothetical protein NA 2Chr19:3681517–3690884 (-)7.798e-12
Glyma.03G177700 hypothetical protein NA 1Chr03:39046772–39051158 (+)5.535e-11
Glyma.03G209700 hypothetical protein NA 1Chr03:41646792–41648527 (+)5.208e-14
Glyma.06G112300 hypothetical protein AT1G44780:AT1G44780:translation initiation factor__AT4G08310:AT4G08310:DNA ligase 1Chr06:9113982–9118848 (-)1.733e-12
Glyma.06G112600 hypothetical protein AT1G77620:AT1G77620:P-loop containing nucleoside triphosphate hydrolases superfamily protein 1Chr06:9134358–9144986 (+)1.733e-12
Glyma.06G112700 hypothetical protein AT1G44760:AT1G44760:Adenine nucleotide alpha hydrolases-like superfamily protein 1Chr06:9156973–9158659 (+)1.733e-12
Glyma.06G126900 hypothetical protein AT5G04520:AT5G04520:3-oxoacyl-acyl-carrier synthase-like protein (Protein of unknown function DUF455) 1Chr06:10403126–10408307 (-)4.967e-12
Glyma.07G015700 hypothetical protein AT1G79750:NADP-ME4:NADP-malic enzyme 4 1Chr07:1244977–1251198 (-)4.943e-11
Glyma.07G017600 hypothetical protein NA 1Chr07:1415837–1422680 (+)2.551e-11
Glyma.07G021800 hypothetical protein AT1G80920:J8:Chaperone DnaJ-domain superfamily protein 1Chr07:1697119–1698666 (+)3.978e-11
Glyma.08G112600 hypothetical protein NA 1Chr08:8660670–8663379 (-)1.884e-11
Glyma.08G112700 hypothetical protein NA 1Chr08:8661027–8661191 (+)1.884e-11
Glyma.08G204800 hypothetical protein AT3G16140:PSAH-1:photosystem I subunit H-1 1Chr08:16601039–16602646 (+)4.033e-11
Glyma.09G016500 hypothetical protein NA 1Chr09:1274652–1276853 (-)8.875e-11
Glyma.12G202200 hypothetical protein AT2G20860:LIP1:lipoic acid synthase 1 1Chr12:36267599–36271584 (+)7.175e-12
Glyma.12G202300 hypothetical protein NA 1Chr12:36275438–36276838 (+)7.175e-12
Glyma.12G202400 hypothetical protein AT4G03415:PP2C52:Protein phosphatase 2C family protein 1Chr12:36289704–36295084 (-)5.541e-11
Glyma.12G203600 EXPB8 AT2G20750:EXPB1:expansin B1 1Chr12:36390283–36394245 (-)1.079e-12
Glyma.12G204000 hypothetical protein AT1G03687:AT1G03687:DTW domain-containing protein 1Chr12:36428558–36432835 (+)5.852e-12
Glyma.12G204400 hypothetical protein AT4G03560:TPC1:two-pore channel 1 1Chr12:36473422–36498915 (+)5.852e-12
Glyma.14G201700 hypothetical protein NA 1Chr14:46711634–46715644 (-)1.199e-13
Glyma.15G192400 hypothetical protein AT5G49150:GEX2:gamete expressed 2 1Chr15:20964449–20974340 (+)5.271e-12
Glyma.15G192900 hypothetical protein NA 1Chr15:21108370–21110353 (+)5.271e-12
Glyma.16G117400 hypothetical protein NA 1Chr16:26234552–26238233 (-)3.798e-11
Glyma.16G119300 hypothetical protein NA 1Chr16:26643902–26644416 (+)4.04e-11
Glyma.16G119400 hypothetical protein NA 1Chr16:26684278–26687087 (+)1.889e-11
Glyma.16G121500 hypothetical protein NA 1Chr16:27007186–27010856 (+)4.918e-11
Glyma.17G004500 hypothetical protein AT5G47800:AT5G47800:Phototropic-responsive NPH3 family protein 1Chr17:444580–451107 (-)4.508e-12
Glyma.17G005900 hypothetical protein AT4G17215:AT4G17215:Pollen Ole e 1 allergen and extensin family protein__AT2G40113:AT2G40113:Pollen Ole e 1 allergen an… 1Chr17:546212–548525 (+)4.508e-12
Glyma.17G006300 hypothetical protein AT4G16380:AT4G16380:Heavy metal transport/detoxification superfamily protein 1Chr17:586135–588091 (+)5.021e-11
Glyma.17G007000 hypothetical protein NA 1Chr17:615525–616722 (+)5.021e-11
Glyma.17G007300 hypothetical protein AT4G16440:NAR1:ferredoxin hydrogenase 1Chr17:621626–627757 (-)5.021e-11
Glyma.17G007400 hypothetical protein NA 1Chr17:630066–634738 (-)6.131e-11
Glyma.17G251200 hypothetical protein NA 1Chr17:40605249–40607536 (+)5.985e-12
Glyma.17G251800 hypothetical protein NA 1Chr17:40633579–40636068 (+)5.281e-11
Glyma.17G251900 hypothetical protein AT1G19600:AT1G19600:pfkB-like carbohydrate kinase family protein 1Chr17:40641019–40644794 (+)5.281e-11
Glyma.18G266500 hypothetical protein NA 1Chr18:55088284–55091427 (-)8.738e-11
Glyma.19G012100 hypothetical protein AT3G28150:TBL22:TRICHOME BIREFRINGENCE-LIKE 22 1Chr19:1155711–1161298 (-)5.061e-12
Glyma.19G012300 hypothetical protein NA 1Chr19:1165111–1173031 (-)5.061e-12
Glyma.19G119100 hypothetical protein AT3G03650:EDA5:Exostosin family protein 1Chr19:37668759–37672434 (+)2.093e-11
Glyma.20G019500 hypothetical protein AT1G21065:AT1G21065:secondary thiamine-phosphate synthase enzyme 1Chr20:2039210–2040459 (+)8.076e-13
Glyma.20G019700 hypothetical protein NA 1Chr20:2047020–2050862 (-)1.21e-12
Glyma.20G019800 hypothetical protein AT1G49350:AT1G49350:pfkB-like carbohydrate kinase family protein 1Chr20:2051817–2057262 (+)5.811e-12
Glyma.20G022500 hypothetical protein NA 1Chr20:2342943–2353164 (+)4.345e-11
Glyma.20G026300 hypothetical protein AT1G26560:BGLU40:beta glucosidase 40 1Chr20:2894580–2905241 (+)2.974e-11
Glyma.20G026700 hypothetical protein NA 1Chr20:2935653–2945665 (-)4.156e-11