Soybean mGWAS DBExplore The Genetic Basis Of Soybean Metabolism Glycine max
Overview Annotation GWAS Evidence Associated genes

P16548

Metabolite ID
P16548
Deionized mass
196.0704 Da
Average m/z
197.0781
Average RT
12.3086
Adduct
[M+H]+
Association scope
Overlapping genes only
Associated genes
64
GWAS result file
Available
Open in Soybean Metabolome Repository

Candidate annotations

Search compound candidates by deionized mass and tolerance. Follow compound IDs for database records, or use name searches to explore chemistry and soybean literature. About candidate annotations

GWAS Evidence

Dataset: indexed GWAS records.

Settings

SNP counts, plot highlights, gene associations and downloads use P < 10⁻¹⁰. Changing the threshold updates this page together.

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Associated genes

64 genes linked to SNP records with P < 10⁻¹⁰ in the selected scope. Supporting SNP records are counted per feature–gene pair.

Gene ID Alias Description Arabidopsis ortholog Supporting SNP recordsGene interval (1-based)Minimum P
Glyma.06G313500 hypothetical protein NA 2Chr06:50191600–50203098 (-)9.898e-13
Glyma.07G021800 hypothetical protein AT1G80920:J8:Chaperone DnaJ-domain superfamily protein 2Chr07:1697119–1698666 (+)7.073e-11
Glyma.08G123500 hypothetical protein NA 2Chr08:9494946–9505931 (-)6.039e-11
Glyma.12G202200 hypothetical protein AT2G20860:LIP1:lipoic acid synthase 1 2Chr12:36267599–36271584 (+)2.354e-14
Glyma.13G134400 hypothetical protein AT2G37370:AT2G37370:centrosomal protein of 135 kDa-like protein 2Chr13:24677399–24693129 (-)4.984e-11
Glyma.16G111500 hypothetical protein AT4G35500:AT4G35500:Protein kinase superfamily protein 2Chr16:24626024–24635513 (+)4.665e-11
Glyma.01G169700 hypothetical protein AT4G36410:UBC17:ubiquitin-conjugating enzyme 17 1Chr01:50715084–50719427 (-)1.344e-12
Glyma.01G169800 hypothetical protein AT4G36400:D2HGDH:FAD-linked oxidases family protein 1Chr01:50726088–50733347 (-)1.344e-12
Glyma.02G086900 hypothetical protein AT3G24130:AT3G24130:Pectin lyase-like superfamily protein 1Chr02:7553127–7557516 (-)9.022e-11
Glyma.03G023000 hypothetical protein AT4G00220:JLO:Lateral organ boundaries (LOB) domain family protein 1Chr03:2423540–2428634 (-)9.775e-12
Glyma.03G147400 hypothetical protein NA 1Chr03:36293698–36295294 (+)1.569e-11
Glyma.04G063900 hypothetical protein NA 1Chr04:5310107–5313853 (+)1.194e-11
Glyma.05G232400 hypothetical protein AT3G24440:VRN5:Fibronectin type III domain-containing protein 1Chr05:40992124–41003814 (+)7.541e-11
Glyma.05G232600 hypothetical protein AT4G13360:AT4G13360:ATP-dependent caseinolytic (Clp) protease/crotonase family protein__AT3G24360:AT3G24360:ATP-depende… 1Chr05:41009642–41015826 (+)3.49e-11
Glyma.05G232800 hypothetical protein AT3G18500:AT3G18500:DNAse I-like superfamily protein 1Chr05:41022747–41030067 (-)3.49e-11
Glyma.05G233100 hypothetical protein NA 1Chr05:41041130–41048359 (-)3.49e-11
Glyma.05G233400 ALMT9 aluminum-activated malate transporter 9 AT3G18440:ALMT9:aluminum-activated malate transporter 9 1Chr05:41058365–41063472 (-)3.49e-11
Glyma.05G236400 hypothetical protein AT1G23210:GH9B6:glycosyl hydrolase 9B6__AT1G70710:GH9B1:glycosyl hydrolase 9B1 1Chr05:41274513–41279615 (-)2.953e-18
Glyma.05G236700 hypothetical protein AT4G33760:AT4G33760:tRNA synthetase class II (D, K and N) family protein 1Chr05:41301540–41310727 (+)1.793e-15
Glyma.05G237800 hypothetical protein AT1G48790:AMSH1:associated molecule with the SH3 domain of STAM 1 1Chr05:41406807–41413022 (-)1.716e-12
Glyma.07G013400 hypothetical protein AT3G21310:AT3G21310:Core-2/I-branching beta-1,6-N-acetylglucosaminyltransferase family protein 1Chr07:1028243–1033837 (-)5.246e-11
Glyma.07G013500 hypothetical protein NA 1Chr07:1036819–1041984 (-)5.246e-11
Glyma.07G017600 hypothetical protein NA 1Chr07:1415837–1422680 (+)1.264e-11
Glyma.07G018100 hypothetical protein NA 1Chr07:1442368–1445430 (-)3.12e-11
Glyma.07G018300 hypothetical protein AT3G27750:EMB3123:PPR containing protein 1Chr07:1457706–1458428 (+)3.12e-11
Glyma.08G122000 hypothetical protein AT5G46400:PRP39-2:Tetratricopeptide repeat (TPR)-like superfamily protein 1Chr08:9397717–9410004 (+)5.659e-11
Glyma.08G122200 hypothetical protein NA 1Chr08:9416766–9429995 (-)6.039e-11
Glyma.08G122300 hypothetical protein AT1G29390:COR314-TM2:cold regulated 314 thylakoid membrane 2 1Chr08:9435391–9437279 (+)6.039e-11
Glyma.08G122500 hypothetical protein NA 1Chr08:9441329–9445315 (-)6.039e-11
Glyma.08G122700 hypothetical protein AT1G29350:AT1G29350:RNA polymerase II degradation factor-like protein (DUF1296) 1Chr08:9452604–9458932 (+)6.039e-11
Glyma.08G204800 hypothetical protein AT3G16140:PSAH-1:photosystem I subunit H-1 1Chr08:16601039–16602646 (+)1.628e-11
Glyma.09G082000 hypothetical protein NA 1Chr09:9638564–9650178 (+)5.024e-12
Glyma.09G084300 hypothetical protein AT2G34680:AIR9:Outer arm dynein light chain 1 protein 1Chr09:10129602–10197250 (-)3.219e-11
Glyma.09G249500 hypothetical protein NA 1Chr09:47056885–47062577 (+)1.355e-11
Glyma.10G078700 hypothetical protein NA 1Chr10:8882318–8903950 (+)5.174e-11
Glyma.10G079100 hypothetical protein NA 1Chr10:8960669–8962364 (-)5.174e-11
Glyma.10G079800 hypothetical protein NA 1Chr10:9223520–9228511 (-)5.174e-11
Glyma.10G080000 hypothetical protein AT3G11660:NHL1:NDR1/HIN1-like 1__AT3G52470:AT3G52470:Late embryosis abundant (LEA) hydroxyproline-rich glycoprotein fam… 1Chr10:9258476–9260697 (-)5.174e-11
Glyma.10G081200 hypothetical protein NA 1Chr10:9600771–9603988 (-)2.889e-11
Glyma.10G081700 hypothetical protein NA 1Chr10:9752508–9758422 (+)9.445e-11
Glyma.11G024800 hypothetical protein NA 1Chr11:1754343–1759398 (+)4.391e-11
Glyma.12G114500 hypothetical protein AT4G22930:PYR4:pyrimidin 4 1Chr12:11396572–11400825 (-)7.897e-11
Glyma.12G114900 hypothetical protein NA 1Chr12:11457987–11462951 (-)7.897e-11
Glyma.12G202300 hypothetical protein NA 1Chr12:36275438–36276838 (+)2.354e-14
Glyma.12G202400 hypothetical protein AT4G03415:PP2C52:Protein phosphatase 2C family protein 1Chr12:36289704–36295084 (-)1.066e-12
Glyma.12G203600 EXPB8 AT2G20750:EXPB1:expansin B1 1Chr12:36390283–36394245 (-)1.115e-13
Glyma.12G203700 hypothetical protein AT4G28260:AT4G28260:acyl-UDP-N-acetylglucosamine O-acyltransferase 1Chr12:36406747–36413696 (+)2.478e-11
Glyma.12G204000 hypothetical protein AT1G03687:AT1G03687:DTW domain-containing protein 1Chr12:36428558–36432835 (+)1.399e-12
Glyma.12G204400 hypothetical protein AT4G03560:TPC1:two-pore channel 1 1Chr12:36473422–36498915 (+)1.399e-12
Glyma.13G134300 hypothetical protein NA 1Chr13:24664171–24665742 (-)4.984e-11
Glyma.13G135500 hypothetical protein AT5G02780:GSTL1:glutathione transferase lambda 1 1Chr13:24798567–24801567 (+)8.55e-11
Glyma.13G135700 hypothetical protein NA 1Chr13:24812720–24818735 (+)8.55e-11
Glyma.13G135800 hypothetical protein AT5G02800:CDL1:Protein kinase superfamily protein 1Chr13:24820151–24823999 (-)8.55e-11
Glyma.14G093100 hypothetical protein NA 1Chr14:8654730–8655892 (-)5.752e-11
Glyma.15G009800 hypothetical protein NA 1Chr15:753771–758859 (-)9.775e-11
Glyma.15G124500 MLO-like protein 13 AT4G24250:MLO13:Seven transmembrane MLO family protein 1Chr15:9888761–9894068 (-)7.803e-11
Glyma.16G111100 hypothetical protein NA 1Chr16:24438458–24444801 (+)4.665e-11
Glyma.16G117400 hypothetical protein NA 1Chr16:26234552–26238233 (-)3.055e-11
Glyma.16G118100 hypothetical protein AT2G17570:cPT1:Undecaprenyl pyrophosphate synthetase family protein 1Chr16:26324650–26336836 (+)2.273e-11
Glyma.16G119400 hypothetical protein NA 1Chr16:26684278–26687087 (+)1.138e-11
Glyma.19G012100 hypothetical protein AT3G28150:TBL22:TRICHOME BIREFRINGENCE-LIKE 22 1Chr19:1155711–1161298 (-)8.804e-11
Glyma.19G012300 hypothetical protein NA 1Chr19:1165111–1173031 (-)8.804e-11
Glyma.20G019700 hypothetical protein NA 1Chr20:2047020–2050862 (-)4.597e-11
Glyma.20G019800 hypothetical protein AT1G49350:AT1G49350:pfkB-like carbohydrate kinase family protein 1Chr20:2051817–2057262 (+)2.23e-12