Overview Annotation GWAS Evidence Associated genes

P16289

Metabolite ID
P16289
Deionized mass
446.1181 Da
Average m/z
447.1261
Average RT
12.2282
Adduct
[M+H]+
Association scope
Overlapping genes only
Associated genes
39
GWAS result file
Available

Candidate annotations

Search compound candidates by deionized mass and tolerance. Follow compound IDs for database records, or use name searches to explore chemistry and soybean literature. About candidate annotations

GWAS Evidence

Dataset: indexed GWAS records.

Settings

SNP counts, plot highlights, gene associations and downloads use P < 10⁻¹⁰. Changing the threshold updates this page together.

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This Q–Q plot describes the indexed records. For downsampled files, it does not represent the distribution across all tested variants. Data coverage

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Associated genes

39 genes linked to SNP records with P < 10⁻¹⁰ in the selected scope. Supporting SNP records are counted per feature–gene pair.

Gene ID Alias Description Arabidopsis ortholog Supporting SNP recordsGene interval (1-based)Minimum P
Glyma.19G027000 hypothetical protein NA 4Chr19:3335896–3343744 (+)1.129e-11
Glyma.19G011800 hypothetical protein AT3G01420:DOX1:Peroxidase superfamily protein 3Chr19:1134716–1143232 (+)3.672e-11
Glyma.05G236400 hypothetical protein AT1G23210:GH9B6:glycosyl hydrolase 9B6__AT1G70710:GH9B1:glycosyl hydrolase 9B1 2Chr05:41274513–41279615 (-)1.38e-12
Glyma.13G135700 hypothetical protein NA 2Chr13:24812720–24818735 (+)1.123e-13
Glyma.13G135800 hypothetical protein AT5G02800:CDL1:Protein kinase superfamily protein 2Chr13:24820151–24823999 (-)1.124e-13
Glyma.19G026600 hypothetical protein AT4G13700:PAP23:purple acid phosphatase 23 2Chr19:3303658–3312907 (-)1.129e-11
Glyma.19G029600 hypothetical protein NA 2Chr19:3681517–3690884 (-)4.593e-11
Glyma.02G088200 hypothetical protein AT1G64680:AT1G64680:beta-carotene isomerase D27 1Chr02:7717452–7725490 (+)5.958e-13
Glyma.02G091800 hypothetical protein NA 1Chr02:8129908–8133455 (+)2.653e-11
Glyma.03G007100 hypothetical protein AT5G17780:AT5G17780:alpha/beta-Hydrolases superfamily protein__AT5G17720:AT5G17720:alpha/beta-Hydrolases superfamily pr… 1Chr03:647777–651152 (-)1.029e-11
Glyma.03G022100 hypothetical protein AT4G32430:AT4G32430:Pentatricopeptide repeat (PPR) superfamily protein 1Chr03:2301675–2307263 (+)6.521e-11
Glyma.03G040600 hypothetical protein AT2G38400:AGT3:alanine:glyoxylate aminotransferase 3 1Chr03:5113019–5121557 (+)1.349e-11
Glyma.05G124700 hypothetical protein NA 1Chr05:31807311–31817648 (+)7.637e-11
Glyma.05G236700 hypothetical protein AT4G33760:AT4G33760:tRNA synthetase class II (D, K and N) family protein 1Chr05:41301540–41310727 (+)3.533e-18
Glyma.05G237800 hypothetical protein AT1G48790:AMSH1:associated molecule with the SH3 domain of STAM 1 1Chr05:41406807–41413022 (-)7.825e-16
Glyma.07G100400 hypothetical protein AT3G18050:AT3G18050:GPI-anchored protein 1Chr07:9523110–9526319 (+)1.538e-11
Glyma.08G227900 hypothetical protein NA 1Chr08:18551920–18567339 (-)7.871e-12
Glyma.08G338900 hypothetical protein NA 1Chr08:45536950–45543029 (-)8.144e-11
Glyma.09G275500 hypothetical protein NA 1Chr09:49105837–49106989 (+)6.266e-11
Glyma.10G028500 hypothetical protein NA 1Chr10:2476846–2478953 (+)2.945e-13
Glyma.10G028700 hypothetical protein AT1G03090:MCCA:methylcrotonyl-CoA carboxylase alpha chain 1Chr10:2485817–2497071 (-)2.945e-13
Glyma.13G135300 hypothetical protein NA 1Chr13:24770681–24773826 (+)2.197e-13
Glyma.13G135400 hypothetical protein AT5G12130:PDE149:integral membrane TerC family protein 1Chr13:24786242–24791938 (+)2.197e-13
Glyma.13G135500 hypothetical protein AT5G02780:GSTL1:glutathione transferase lambda 1 1Chr13:24798567–24801567 (+)1.123e-13
Glyma.14G069500 hypothetical protein AT5G37810:NIP4;1:NOD26-like intrinsic protein 4;1 1Chr14:5822246–5825628 (-)1.13e-11
Glyma.14G213400 hypothetical protein NA 1Chr14:47844823–47847028 (+)1.974e-12
Glyma.16G118100 hypothetical protein AT2G17570:cPT1:Undecaprenyl pyrophosphate synthetase family protein 1Chr16:26324650–26336836 (+)8.894e-11
Glyma.16G119400 hypothetical protein NA 1Chr16:26684278–26687087 (+)5.141e-11
Glyma.16G121000 IQD20 AT3G51380:IQD20:IQ-domain 20 1Chr16:26909514–26910355 (+)6.627e-11
Glyma.16G179800 hypothetical protein AT5G52520:OVA6:Class II aaRS and biotin synthetases superfamily protein 1Chr16:34022480–34027055 (-)2.842e-11
Glyma.19G006900 hypothetical protein AT5G14700:AT5G14700:NAD(P)-binding Rossmann-fold superfamily protein 1Chr19:686556–692466 (-)1.578e-11
Glyma.19G011600 hypothetical protein NA 1Chr19:1111789–1116419 (+)4.066e-11
Glyma.19G011700 hypothetical protein AT3G01420:DOX1:Peroxidase superfamily protein 1Chr19:1123637–1130946 (+)4.066e-11
Glyma.19G031200 hypothetical protein NA 1Chr19:3870532–3874170 (-)5.935e-11
Glyma.19G032500 hypothetical protein NA 1Chr19:4140729–4141955 (-)3.341e-11
Glyma.19G032800 hypothetical protein NA 1Chr19:4196959–4199265 (-)4.984e-11
Glyma.20G019500 hypothetical protein AT1G21065:AT1G21065:secondary thiamine-phosphate synthase enzyme 1Chr20:2039210–2040459 (+)5.42e-11
Glyma.20G019800 hypothetical protein AT1G49350:AT1G49350:pfkB-like carbohydrate kinase family protein 1Chr20:2051817–2057262 (+)2.537e-14
Glyma.20G223300 hypothetical protein AT1G09770:CDC5:cell division cycle 5 1Chr20:45791239–45803369 (-)2.48e-11