Soybean mGWAS DBExplore The Genetic Basis Of Soybean Metabolism Glycine max
Overview Annotation GWAS Evidence Associated genes

P15917

Metabolite ID
P15917
Deionized mass
373.0715 Da
Average m/z
374.0782
Average RT
12.1296
Adduct
[M+H]+
Association scope
Overlapping genes only
Associated genes
53
GWAS result file
Available
Open in Soybean Metabolome Repository

Candidate annotations

Search compound candidates by deionized mass and tolerance. Follow compound IDs for database records, or use name searches to explore chemistry and soybean literature. About candidate annotations

GWAS Evidence

Dataset: indexed GWAS records.

Settings

SNP counts, plot highlights, gene associations and downloads use P < 10⁻¹⁰. Changing the threshold updates this page together.

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Associated genes

53 genes linked to SNP records with P < 10⁻¹⁰ in the selected scope. Supporting SNP records are counted per feature–gene pair.

Gene ID Alias Description Arabidopsis ortholog Supporting SNP recordsGene interval (1-based)Minimum P
Glyma.16G147900 hypothetical protein NA 3Chr16:30864919–30872425 (+)6.472e-11
Glyma.13G135700 hypothetical protein NA 2Chr13:24812720–24818735 (+)5.898e-12
Glyma.13G135800 hypothetical protein AT5G02800:CDL1:Protein kinase superfamily protein 2Chr13:24820151–24823999 (-)5.898e-12
Glyma.16G111500 hypothetical protein AT4G35500:AT4G35500:Protein kinase superfamily protein 2Chr16:24626024–24635513 (+)2.765e-11
Glyma.18G299100 hypothetical protein AT5G13420:TRA2:Aldolase-type TIM barrel family protein 2Chr18:57674222–57678396 (+)3.864e-12
Glyma.19G009000 hypothetical protein AT5G14780:FDH:formate dehydrogenase 2Chr19:860974–865476 (+)3.96e-15
Glyma.01G034700 hypothetical protein NA 1Chr01:3599923–3602578 (-)2.033e-11
Glyma.03G019600 hypothetical protein AT2G45640:SAP18:SIN3 associated polypeptide P18 1Chr03:2007617–2009871 (+)2.09e-11
Glyma.03G019700 hypothetical protein AT3G61130:GAUT1:galacturonosyltransferase 1 1Chr03:2010835–2018418 (+)3.06e-12
Glyma.03G023000 hypothetical protein AT4G00220:JLO:Lateral organ boundaries (LOB) domain family protein 1Chr03:2423540–2428634 (-)3.461e-11
Glyma.03G177700 hypothetical protein NA 1Chr03:39046772–39051158 (+)4.427e-11
Glyma.05G131200 hypothetical protein AT5G58230:MSI1:Transducin/WD40 repeat-like superfamily protein 1Chr05:32421116–32425198 (-)7.134e-11
Glyma.05G236400 hypothetical protein AT1G23210:GH9B6:glycosyl hydrolase 9B6__AT1G70710:GH9B1:glycosyl hydrolase 9B1 1Chr05:41274513–41279615 (-)2.681e-13
Glyma.05G236700 hypothetical protein AT4G33760:AT4G33760:tRNA synthetase class II (D, K and N) family protein 1Chr05:41301540–41310727 (+)2.427e-13
Glyma.05G237800 hypothetical protein AT1G48790:AMSH1:associated molecule with the SH3 domain of STAM 1 1Chr05:41406807–41413022 (-)6.13e-14
Glyma.06G112300 hypothetical protein AT1G44780:AT1G44780:translation initiation factor__AT4G08310:AT4G08310:DNA ligase 1Chr06:9113982–9118848 (-)4.22e-11
Glyma.06G112600 hypothetical protein AT1G77620:AT1G77620:P-loop containing nucleoside triphosphate hydrolases superfamily protein 1Chr06:9134358–9144986 (+)4.22e-11
Glyma.06G112700 hypothetical protein AT1G44760:AT1G44760:Adenine nucleotide alpha hydrolases-like superfamily protein 1Chr06:9156973–9158659 (+)4.22e-11
Glyma.06G313500 hypothetical protein NA 1Chr06:50191600–50203098 (-)8.62e-11
Glyma.07G068200 hypothetical protein AT4G00310:EDA8:Putative membrane lipoprotein 1Chr07:6146155–6148036 (-)5.509e-11
Glyma.08G150100 hypothetical protein AT2G44450:BGLU15:beta glucosidase 15 1Chr08:11525692–11536927 (+)4.699e-12
Glyma.09G082000 hypothetical protein NA 1Chr09:9638564–9650178 (+)6.766e-11
Glyma.09G246700 hypothetical protein AT1G22840:CYTC-1:CYTOCHROME C-1 1Chr09:46835469–46838091 (-)1.054e-13
Glyma.10G081700 hypothetical protein NA 1Chr10:9752508–9758422 (+)2.623e-11
Glyma.12G114500 hypothetical protein AT4G22930:PYR4:pyrimidin 4 1Chr12:11396572–11400825 (-)4.54e-11
Glyma.12G114900 hypothetical protein NA 1Chr12:11457987–11462951 (-)4.54e-11
Glyma.13G135300 hypothetical protein NA 1Chr13:24770681–24773826 (+)8.037e-11
Glyma.13G135400 hypothetical protein AT5G12130:PDE149:integral membrane TerC family protein 1Chr13:24786242–24791938 (+)8.037e-11
Glyma.13G135500 hypothetical protein AT5G02780:GSTL1:glutathione transferase lambda 1 1Chr13:24798567–24801567 (+)5.898e-12
Glyma.15G121100 hypothetical protein NA 1Chr15:9567797–9570248 (+)4.564e-12
Glyma.15G121300 hypothetical protein AT5G47760:PGLP2:2-phosphoglycolate phosphatase 2 1Chr15:9584685–9590201 (-)5.722e-12
Glyma.15G121500 hypothetical protein AT1G03370:AT1G03370:C2 calcium/lipid-binding and GRAM domain containing protein 1Chr15:9602794–9615281 (+)4.564e-12
Glyma.15G121800 hypothetical protein NA 1Chr15:9643746–9648073 (+)4.564e-12
Glyma.15G124000 hypothetical protein NA 1Chr15:9845097–9849312 (-)4.341e-12
Glyma.15G124500 MLO-like protein 13 AT4G24250:MLO13:Seven transmembrane MLO family protein 1Chr15:9888761–9894068 (-)2.218e-13
Glyma.16G106300 hypothetical protein AT5G23900:AT5G23900:Ribosomal protein L13e family protein 1Chr16:21495147–21497932 (+)7.654e-11
Glyma.16G111100 hypothetical protein NA 1Chr16:24438458–24444801 (+)2.765e-11
Glyma.16G117400 hypothetical protein NA 1Chr16:26234552–26238233 (-)1.402e-13
Glyma.16G118100 hypothetical protein AT2G17570:cPT1:Undecaprenyl pyrophosphate synthetase family protein 1Chr16:26324650–26336836 (+)9.569e-12
Glyma.16G119300 hypothetical protein NA 1Chr16:26643902–26644416 (+)1.233e-11
Glyma.16G119400 hypothetical protein NA 1Chr16:26684278–26687087 (+)8.865e-11
Glyma.16G121000 IQD20 AT3G51380:IQD20:IQ-domain 20 1Chr16:26909514–26910355 (+)2.596e-11
Glyma.16G121500 hypothetical protein NA 1Chr16:27007186–27010856 (+)9.2e-12
Glyma.16G145100 hypothetical protein NA 1Chr16:30578388–30581421 (-)4.614e-11
Glyma.16G145600 hypothetical protein AT1G11310:MLO2:Seven transmembrane MLO family protein__AT2G39200:MLO12:Seven transmembrane MLO family protein__AT1G6156… 1Chr16:30652378–30659548 (+)4.614e-11
Glyma.18G266100 hypothetical protein NA 1Chr18:55052591–55056489 (-)2.281e-11
Glyma.18G266400 hypothetical protein AT3G29390:RIK:RS2-interacting KH protein 1Chr18:55076548–55086297 (+)7.815e-11
Glyma.18G266500 hypothetical protein NA 1Chr18:55088284–55091427 (-)1.241e-14
Glyma.18G298600 hypothetical protein AT1G44960:AT1G44960:SNARE associated Golgi protein family 1Chr18:57614292–57617223 (+)1.125e-12
Glyma.18G298800 hypothetical protein NA 1Chr18:57633577–57639546 (+)4.13e-12
Glyma.19G012100 hypothetical protein AT3G28150:TBL22:TRICHOME BIREFRINGENCE-LIKE 22 1Chr19:1155711–1161298 (-)9.286e-11
Glyma.19G012300 hypothetical protein NA 1Chr19:1165111–1173031 (-)9.286e-11
Glyma.20G105900 hypothetical protein AT2G16990:AT2G16990:Major facilitator superfamily protein 1Chr20:34832271–34839955 (-)8.973e-12