Soybean mGWAS DBExplore The Genetic Basis Of Soybean Metabolism Glycine max
Overview Annotation GWAS Evidence Associated genes

P15315

Metabolite ID
P15315
Deionized mass
814.2170 Da
Average m/z
815.2259
Average RT
11.9656
Adduct
[M+H]+
Association scope
Overlapping genes only
Associated genes
68
GWAS result file
Available
Open in Soybean Metabolome Repository

Candidate annotations

Search compound candidates by deionized mass and tolerance. Follow compound IDs for database records, or use name searches to explore chemistry and soybean literature. About candidate annotations

GWAS Evidence

Dataset: indexed GWAS records.

Settings

SNP counts, plot highlights, gene associations and downloads use P < 10⁻¹⁰. Changing the threshold updates this page together.

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Associated genes

68 genes linked to SNP records with P < 10⁻¹⁰ in the selected scope. Supporting SNP records are counted per feature–gene pair.

Gene ID Alias Description Arabidopsis ortholog Supporting SNP recordsGene interval (1-based)Minimum P
Glyma.04G096800 hypothetical protein AT4G24460:CLT2:CRT (chloroquine-resistance transporter)-like transporter 2 4Chr04:8747857–8778229 (-)1.347e-11
Glyma.06G315100 hypothetical protein AT5G04930:ALA1:aminophospholipid ATPase 1 2Chr06:50401945–50408153 (+)1.505e-11
Glyma.12G054700 hypothetical protein AT3G45140:LOX2:lipoxygenase 2 2Chr12:3949453–3957386 (-)2.185e-12
Glyma.16G111500 hypothetical protein AT4G35500:AT4G35500:Protein kinase superfamily protein 2Chr16:24626024–24635513 (+)2.635e-11
Glyma.18G299100 hypothetical protein AT5G13420:TRA2:Aldolase-type TIM barrel family protein 2Chr18:57674222–57678396 (+)1.168e-12
Glyma.01G169700 hypothetical protein AT4G36410:UBC17:ubiquitin-conjugating enzyme 17 1Chr01:50715084–50719427 (-)5.23e-13
Glyma.01G169800 hypothetical protein AT4G36400:D2HGDH:FAD-linked oxidases family protein 1Chr01:50726088–50733347 (-)5.23e-13
Glyma.02G061700 hypothetical protein AT2G23450:AT2G23450:Protein kinase superfamily protein 1Chr02:5577271–5582873 (-)3.106e-11
Glyma.02G086900 hypothetical protein AT3G24130:AT3G24130:Pectin lyase-like superfamily protein 1Chr02:7553127–7557516 (-)2.719e-13
Glyma.02G205400 hypothetical protein AT5G57880:MPS1:multipolar spindle 1 1Chr02:39040135–39043181 (-)4.896e-13
Glyma.03G023000 hypothetical protein AT4G00220:JLO:Lateral organ boundaries (LOB) domain family protein 1Chr03:2423540–2428634 (-)1.068e-13
Glyma.04G096500 hypothetical protein NA 1Chr04:8664088–8675605 (+)1.347e-11
Glyma.04G096600 hypothetical protein AT1G58250:SAB:HYPERSENSITIVE TO PI STARVATION 4 1Chr04:8693806–8724007 (-)1.347e-11
Glyma.04G096900 hypothetical protein NA 1Chr04:8778953–8796458 (-)1.347e-11
Glyma.05G223100 hypothetical protein AT2G19680:AT2G19680:Mitochondrial ATP synthase subunit G protein 1Chr05:40259388–40262641 (+)6.15e-11
Glyma.05G224700 hypothetical protein NA 1Chr05:40351005–40361888 (+)2.463e-11
Glyma.05G226000 hypothetical protein AT5G19730:AT5G19730:Pectin lyase-like superfamily protein 1Chr05:40458098–40461736 (+)4.426e-11
Glyma.05G232400 hypothetical protein AT3G24440:VRN5:Fibronectin type III domain-containing protein 1Chr05:40992124–41003814 (+)1.325e-13
Glyma.05G232600 hypothetical protein AT4G13360:AT4G13360:ATP-dependent caseinolytic (Clp) protease/crotonase family protein__AT3G24360:AT3G24360:ATP-depende… 1Chr05:41009642–41015826 (+)1.356e-13
Glyma.05G232800 hypothetical protein AT3G18500:AT3G18500:DNAse I-like superfamily protein 1Chr05:41022747–41030067 (-)1.356e-13
Glyma.05G233100 hypothetical protein NA 1Chr05:41041130–41048359 (-)1.356e-13
Glyma.05G233400 ALMT9 aluminum-activated malate transporter 9 AT3G18440:ALMT9:aluminum-activated malate transporter 9 1Chr05:41058365–41063472 (-)1.356e-13
Glyma.05G233700 COL11 zinc finger protein CONSTANS-LIKE 16-like AT1G68520:BBX14:B-box type zinc finger protein with CCT domain-containing protein 1Chr05:41087671–41089500 (+)1.015e-11
Glyma.05G236400 hypothetical protein AT1G23210:GH9B6:glycosyl hydrolase 9B6__AT1G70710:GH9B1:glycosyl hydrolase 9B1 1Chr05:41274513–41279615 (-)1.378e-15
Glyma.05G236700 hypothetical protein AT4G33760:AT4G33760:tRNA synthetase class II (D, K and N) family protein 1Chr05:41301540–41310727 (+)1.059e-13
Glyma.06G313500 hypothetical protein NA 1Chr06:50191600–50203098 (-)2.573e-11
Glyma.06G316500 hypothetical protein AT2G47420:DIM1A:Ribosomal RNA adenine dimethylase family protein 1Chr06:50531222–50538652 (-)6.652e-11
Glyma.06G317100 hypothetical protein AT5G61520:AT5G61520:Major facilitator superfamily protein 1Chr06:50586679–50589765 (+)1.478e-12
Glyma.07G015700 hypothetical protein AT1G79750:NADP-ME4:NADP-malic enzyme 4 1Chr07:1244977–1251198 (-)7.656e-11
Glyma.07G017600 hypothetical protein NA 1Chr07:1415837–1422680 (+)7.458e-11
Glyma.08G061000 hypothetical protein AT1G11340:AT1G11340:G-type lectin S-receptor-like Serine/Threonine-kinase 1Chr08:4694260–4698526 (-)5.256e-11
Glyma.09G052700 hypothetical protein AT1G31120:KUP10:K+ uptake permease 10 1Chr09:4617652–4626364 (+)1.861e-11
Glyma.09G250000 hypothetical protein NA 1Chr09:47096937–47099390 (-)7.152e-15
Glyma.09G252100 hypothetical protein AT1G79790:FHY1:Haloacid dehalogenase-like hydrolase (HAD) superfamily protein 1Chr09:47245185–47248478 (+)4.516e-11
Glyma.09G253800 hypothetical protein NA 1Chr09:47356240–47357763 (-)1.192e-13
Glyma.09G253900 hypothetical protein NA 1Chr09:47359742–47364806 (-)1.192e-13
Glyma.09G255700 hypothetical protein AT1G01540:AT1G01540:Protein kinase superfamily protein__AT4G01330:AT4G01330:Protein kinase superfamily protein 1Chr09:47507850–47511743 (+)1.474e-13
Glyma.09G268900 hypothetical protein NA 1Chr09:48638803–48644136 (+)2.355e-13
Glyma.09G269100 hypothetical protein NA 1Chr09:48651429–48653656 (-)6.438e-11
Glyma.09G270200 hypothetical protein AT5G01020:AT5G01020:Protein kinase superfamily protein 1Chr09:48725417–48728520 (-)5.307e-12
Glyma.09G270400 hypothetical protein NA 1Chr09:48735991–48740879 (+)7.42e-13
Glyma.10G265400 hypothetical protein AT2G01290:RPI2: 1Chr10:48921268–48922795 (+)8.419e-11
Glyma.12G049300 hypothetical protein NA 1Chr12:3538428–3539170 (-)3.219e-11
Glyma.12G054500 hypothetical protein NA 1Chr12:3938604–3943724 (+)1.351e-11
Glyma.13G095000 hypothetical protein NA 1Chr13:21005327–21006774 (-)1.388e-11
Glyma.13G162300 hypothetical protein NA 1Chr13:27773991–27778719 (-)2.171e-11
Glyma.13G170600 ALDH2B6 aldehyde dehydrogenase family 2 member B6 AT1G23800:ALDH2B7:aldehyde dehydrogenase 2B7 1Chr13:28436396–28440865 (-)2.574e-11
Glyma.14G044000 hypothetical protein AT5G62290:AT5G62290:nucleotide-sensitive chloride conductance regulator (ICln) family protein 1Chr14:3343611–3346483 (+)8.647e-11
Glyma.15G124000 hypothetical protein NA 1Chr15:9845097–9849312 (-)1.222e-11
Glyma.15G124500 MLO-like protein 13 AT4G24250:MLO13:Seven transmembrane MLO family protein 1Chr15:9888761–9894068 (-)6.644e-14
Glyma.16G003000 hypothetical protein AT1G58025:AT1G58025:DNA-binding bromodomain-containing protein 1Chr16:164584–168767 (+)2.483e-12
Glyma.16G003200 hypothetical protein NA 1Chr16:172940–178668 (-)2.483e-12
Glyma.16G003600 hypothetical protein AT5G49945:AT5G49945: 1Chr16:198072–202486 (-)1.364e-12
Glyma.16G050500 AFB3B auxin signaling F-box 3 protein AT3G26810:AFB2:auxin signaling F-box 2 1Chr16:4853237–4856710 (+)4.296e-12
Glyma.16G057700 hypothetical protein AT3G27180:AT3G27180:S-adenosyl-L-methionine-dependent methyltransferases superfamily protein 1Chr16:5656328–5663040 (-)6.595e-11
Glyma.16G111100 hypothetical protein NA 1Chr16:24438458–24444801 (+)2.635e-11
Glyma.16G146300 hypothetical protein NA 1Chr16:30714315–30716624 (+)2.015e-11
Glyma.16G146700 hypothetical protein NA 1Chr16:30755899–30759360 (-)2.015e-11
Glyma.16G189100 hypothetical protein AT1G05190:emb2394:Ribosomal protein L6 family 1Chr16:35170253–35173950 (-)9.998e-11
Glyma.16G208500 EIF6 AT3G55620:eIF6A:Translation initiation factor IF6 1Chr16:36806718–36809299 (+)7.062e-11
Glyma.16G209300 hypothetical protein NA 1Chr16:36856833–36863994 (-)2.546e-11
Glyma.16G210300 hypothetical protein AT1G73340:AT1G73340:Cytochrome P450 superfamily protein 1Chr16:36943073–36948828 (+)4.107e-11
Glyma.16G210400 hypothetical protein AT1G73350:AT1G73350:ankyrin repeat protein 1Chr16:36949685–36953467 (+)4.107e-11
Glyma.17G118900 hypothetical protein NA 1Chr17:9401882–9402864 (+)2.98e-12
Glyma.18G112600 hypothetical protein NA 1Chr18:13398219–13405422 (+)6.545e-12
Glyma.18G298600 hypothetical protein AT1G44960:AT1G44960:SNARE associated Golgi protein family 1Chr18:57614292–57617223 (+)2.711e-11
Glyma.20G098400 hypothetical protein AT1G56340:CRT1a:calreticulin 1a__AT1G09210:CRT1b:calreticulin 1b 1Chr20:34151918–34155417 (+)4.444e-11
Glyma.20G107200 hypothetical protein AT4G38540:AT4G38540:FAD/NAD(P)-binding oxidoreductase family protein 1Chr20:34984922–34988496 (+)6.078e-11